Protein–RNA interactions for Protein: Q9NS62

THSD1, Thrombospondin type-1 domain-containing protein 1, humanhuman

Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THSD1Q9NS62 AC008764.7-201ENST00000593779 1081 ntBASIC21.85■■□□□ 1.09
THSD1Q9NS62 AC099791.2-201ENST00000605725 427 ntBASIC21.85■■□□□ 1.09
THSD1Q9NS62 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC21.85■■□□□ 1.09
THSD1Q9NS62 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC21.85■■□□□ 1.09
THSD1Q9NS62 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
THSD1Q9NS62 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
THSD1Q9NS62 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC21.85■■□□□ 1.09
THSD1Q9NS62 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC21.85■■□□□ 1.09
THSD1Q9NS62 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
THSD1Q9NS62 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
THSD1Q9NS62 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC21.84■■□□□ 1.09
THSD1Q9NS62 MIR6089-201ENST00000616698 64 ntBASIC21.84■■□□□ 1.09
THSD1Q9NS62 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
THSD1Q9NS62 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
THSD1Q9NS62 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
THSD1Q9NS62 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
THSD1Q9NS62 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC21.84■■□□□ 1.09
THSD1Q9NS62 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC21.84■■□□□ 1.09
THSD1Q9NS62 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC21.84■■□□□ 1.09
THSD1Q9NS62 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC21.84■■□□□ 1.09
THSD1Q9NS62 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
THSD1Q9NS62 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
THSD1Q9NS62 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
THSD1Q9NS62 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC21.83■■□□□ 1.09
THSD1Q9NS62 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
THSD1Q9NS62 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
THSD1Q9NS62 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
THSD1Q9NS62 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
THSD1Q9NS62 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
THSD1Q9NS62 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC21.83■■□□□ 1.09
THSD1Q9NS62 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC21.83■■□□□ 1.09
THSD1Q9NS62 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC21.83■■□□□ 1.09
THSD1Q9NS62 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
THSD1Q9NS62 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.08
THSD1Q9NS62 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC21.83■■□□□ 1.08
THSD1Q9NS62 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
THSD1Q9NS62 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
THSD1Q9NS62 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC21.82■■□□□ 1.08
THSD1Q9NS62 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC21.82■■□□□ 1.08
THSD1Q9NS62 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
THSD1Q9NS62 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC21.82■■□□□ 1.08
THSD1Q9NS62 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
THSD1Q9NS62 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
THSD1Q9NS62 AC099791.1-201ENST00000416440 715 ntBASIC21.82■■□□□ 1.08
THSD1Q9NS62 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC21.82■■□□□ 1.08
THSD1Q9NS62 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC21.82■■□□□ 1.08
THSD1Q9NS62 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
THSD1Q9NS62 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
THSD1Q9NS62 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
THSD1Q9NS62 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
THSD1Q9NS62 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC21.81■■□□□ 1.08
THSD1Q9NS62 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC21.81■■□□□ 1.08
THSD1Q9NS62 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC21.81■■□□□ 1.08
THSD1Q9NS62 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
THSD1Q9NS62 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
THSD1Q9NS62 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
THSD1Q9NS62 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC21.81■■□□□ 1.08
THSD1Q9NS62 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
THSD1Q9NS62 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
THSD1Q9NS62 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
THSD1Q9NS62 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
THSD1Q9NS62 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
THSD1Q9NS62 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC21.8■■□□□ 1.08
THSD1Q9NS62 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC21.8■■□□□ 1.08
THSD1Q9NS62 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
THSD1Q9NS62 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
THSD1Q9NS62 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
THSD1Q9NS62 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC21.8■■□□□ 1.08
THSD1Q9NS62 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
THSD1Q9NS62 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
THSD1Q9NS62 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC21.79■■□□□ 1.08
THSD1Q9NS62 STK32C-205ENST00000456004 607 ntTSL 2 BASIC21.79■■□□□ 1.08
THSD1Q9NS62 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
THSD1Q9NS62 RHOF-204ENST00000537265 699 ntTSL 2 BASIC21.79■■□□□ 1.08
THSD1Q9NS62 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
THSD1Q9NS62 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
THSD1Q9NS62 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
THSD1Q9NS62 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
THSD1Q9NS62 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
THSD1Q9NS62 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
THSD1Q9NS62 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
THSD1Q9NS62 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC21.78■■□□□ 1.08
THSD1Q9NS62 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC21.78■■□□□ 1.08
THSD1Q9NS62 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC21.78■■□□□ 1.08
THSD1Q9NS62 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
THSD1Q9NS62 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
THSD1Q9NS62 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC21.77■■□□□ 1.08
THSD1Q9NS62 AC012676.1-201ENST00000574705 1949 ntBASIC21.77■■□□□ 1.08
THSD1Q9NS62 JTB-203ENST00000368589 1216 ntTSL 2 BASIC21.77■■□□□ 1.08
THSD1Q9NS62 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
THSD1Q9NS62 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
THSD1Q9NS62 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC21.77■■□□□ 1.08
THSD1Q9NS62 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC21.77■■□□□ 1.08
THSD1Q9NS62 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
THSD1Q9NS62 AC241377.3-202ENST00000626088 1088 ntBASIC21.77■■□□□ 1.08
THSD1Q9NS62 AC241585.3-202ENST00000628937 1088 ntBASIC21.77■■□□□ 1.08
THSD1Q9NS62 AC245100.8-202ENST00000629247 1058 ntBASIC21.77■■□□□ 1.08
THSD1Q9NS62 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
THSD1Q9NS62 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
THSD1Q9NS62 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms