Protein–RNA interactions for Protein: Q9C0G0

ZNF407, Zinc finger protein 407, humanhuman

Predictions only

Length 2,248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF407Q9C0G0 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
ZNF407Q9C0G0 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC20.31■□□□□ 0.84
ZNF407Q9C0G0 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC20.31■□□□□ 0.84
ZNF407Q9C0G0 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC20.31■□□□□ 0.84
ZNF407Q9C0G0 CA15P2-201ENST00000611168 834 ntBASIC20.31■□□□□ 0.84
ZNF407Q9C0G0 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
ZNF407Q9C0G0 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ZNF407Q9C0G0 STOX2-205ENST00000513034 807 ntTSL 3 BASIC20.3■□□□□ 0.84
ZNF407Q9C0G0 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC20.3■□□□□ 0.84
ZNF407Q9C0G0 AC087623.3-201ENST00000607047 1098 ntBASIC20.3■□□□□ 0.84
ZNF407Q9C0G0 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC20.3■□□□□ 0.84
ZNF407Q9C0G0 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
ZNF407Q9C0G0 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
ZNF407Q9C0G0 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC20.3■□□□□ 0.84
ZNF407Q9C0G0 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
ZNF407Q9C0G0 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
ZNF407Q9C0G0 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC20.3■□□□□ 0.84
ZNF407Q9C0G0 SLC47A1P1-202ENST00000449666 945 ntBASIC20.3■□□□□ 0.84
ZNF407Q9C0G0 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
ZNF407Q9C0G0 LINC01124-201ENST00000409786 2117 ntBASIC20.3■□□□□ 0.84
ZNF407Q9C0G0 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ZNF407Q9C0G0 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
ZNF407Q9C0G0 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ZNF407Q9C0G0 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
ZNF407Q9C0G0 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ZNF407Q9C0G0 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
ZNF407Q9C0G0 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC20.29■□□□□ 0.84
ZNF407Q9C0G0 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC20.29■□□□□ 0.84
ZNF407Q9C0G0 AC092171.4-201ENST00000609130 632 ntBASIC20.29■□□□□ 0.84
ZNF407Q9C0G0 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
ZNF407Q9C0G0 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ZNF407Q9C0G0 ABCB10P4-201ENST00000566803 2184 ntBASIC20.29■□□□□ 0.84
ZNF407Q9C0G0 AC099791.1-201ENST00000416440 715 ntBASIC20.29■□□□□ 0.84
ZNF407Q9C0G0 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC20.29■□□□□ 0.84
ZNF407Q9C0G0 MIR3181-201ENST00000578512 73 ntBASIC20.29■□□□□ 0.84
ZNF407Q9C0G0 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC20.29■□□□□ 0.84
ZNF407Q9C0G0 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ZNF407Q9C0G0 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ZNF407Q9C0G0 AC004812.2-201ENST00000611079 2094 ntBASIC20.28■□□□□ 0.84
ZNF407Q9C0G0 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
ZNF407Q9C0G0 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
ZNF407Q9C0G0 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
ZNF407Q9C0G0 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
ZNF407Q9C0G0 AC027682.1-201ENST00000562846 899 ntBASIC20.27■□□□□ 0.84
ZNF407Q9C0G0 AC136469.2-201ENST00000623944 1028 ntBASIC20.27■□□□□ 0.84
ZNF407Q9C0G0 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
ZNF407Q9C0G0 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
ZNF407Q9C0G0 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.84
ZNF407Q9C0G0 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.83
ZNF407Q9C0G0 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ZNF407Q9C0G0 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
ZNF407Q9C0G0 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
ZNF407Q9C0G0 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
ZNF407Q9C0G0 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC20.26■□□□□ 0.83
ZNF407Q9C0G0 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
ZNF407Q9C0G0 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ZNF407Q9C0G0 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC20.26■□□□□ 0.83
ZNF407Q9C0G0 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ZNF407Q9C0G0 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC20.26■□□□□ 0.83
ZNF407Q9C0G0 PKM-204ENST00000449901 2526 ntTSL 2 BASIC20.26■□□□□ 0.83
ZNF407Q9C0G0 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ZNF407Q9C0G0 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
ZNF407Q9C0G0 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC20.26■□□□□ 0.83
ZNF407Q9C0G0 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ZNF407Q9C0G0 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ZNF407Q9C0G0 ASB1-202ENST00000409297 878 ntTSL 5 BASIC20.26■□□□□ 0.83
ZNF407Q9C0G0 BX842568.3-201ENST00000418104 571 ntBASIC20.26■□□□□ 0.83
ZNF407Q9C0G0 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC20.26■□□□□ 0.83
ZNF407Q9C0G0 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
ZNF407Q9C0G0 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC20.25■□□□□ 0.83
ZNF407Q9C0G0 RBM38-205ENST00000440234 686 ntTSL 2 BASIC20.25■□□□□ 0.83
ZNF407Q9C0G0 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
ZNF407Q9C0G0 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
ZNF407Q9C0G0 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ZNF407Q9C0G0 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC20.25■□□□□ 0.83
ZNF407Q9C0G0 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
ZNF407Q9C0G0 AC233992.3-201ENST00000607491 485 ntBASIC20.25■□□□□ 0.83
ZNF407Q9C0G0 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC20.24■□□□□ 0.83
ZNF407Q9C0G0 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
ZNF407Q9C0G0 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC20.24■□□□□ 0.83
ZNF407Q9C0G0 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
ZNF407Q9C0G0 AC009086.3-201ENST00000623486 1008 ntBASIC20.24■□□□□ 0.83
ZNF407Q9C0G0 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
ZNF407Q9C0G0 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ZNF407Q9C0G0 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
ZNF407Q9C0G0 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
ZNF407Q9C0G0 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC20.23■□□□□ 0.83
ZNF407Q9C0G0 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
ZNF407Q9C0G0 SHD-204ENST00000599689 1729 ntTSL 5 BASIC20.23■□□□□ 0.83
ZNF407Q9C0G0 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
ZNF407Q9C0G0 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
ZNF407Q9C0G0 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
ZNF407Q9C0G0 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
ZNF407Q9C0G0 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
ZNF407Q9C0G0 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC20.23■□□□□ 0.83
ZNF407Q9C0G0 PREB-202ENST00000406567 1910 ntTSL 5 BASIC20.23■□□□□ 0.83
ZNF407Q9C0G0 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
ZNF407Q9C0G0 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC20.23■□□□□ 0.83
ZNF407Q9C0G0 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ZNF407Q9C0G0 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC20.22■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 134.6 ms