Protein–RNA interactions for Protein: Q96BP2

CHCHD1, Coiled-coil-helix-coiled-coil-helix domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD1Q96BP2 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CHCHD1Q96BP2 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CHCHD1Q96BP2 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC16.41■□□□□ 0.22
CHCHD1Q96BP2 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC16.41■□□□□ 0.22
CHCHD1Q96BP2 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CHCHD1Q96BP2 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
CHCHD1Q96BP2 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CHCHD1Q96BP2 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC16.4■□□□□ 0.22
CHCHD1Q96BP2 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC16.4■□□□□ 0.22
CHCHD1Q96BP2 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CHCHD1Q96BP2 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CHCHD1Q96BP2 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CHCHD1Q96BP2 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
CHCHD1Q96BP2 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
CHCHD1Q96BP2 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC16.4■□□□□ 0.22
CHCHD1Q96BP2 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CHCHD1Q96BP2 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
CHCHD1Q96BP2 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CHCHD1Q96BP2 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CHCHD1Q96BP2 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CHCHD1Q96BP2 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CHCHD1Q96BP2 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC16.4■□□□□ 0.22
CHCHD1Q96BP2 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
CHCHD1Q96BP2 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC16.39■□□□□ 0.22
CHCHD1Q96BP2 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CHCHD1Q96BP2 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC16.39■□□□□ 0.21
CHCHD1Q96BP2 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC16.39■□□□□ 0.21
CHCHD1Q96BP2 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC16.39■□□□□ 0.21
CHCHD1Q96BP2 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
CHCHD1Q96BP2 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CHCHD1Q96BP2 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CHCHD1Q96BP2 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
CHCHD1Q96BP2 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CHCHD1Q96BP2 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC16.38■□□□□ 0.21
CHCHD1Q96BP2 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CHCHD1Q96BP2 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CHCHD1Q96BP2 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CHCHD1Q96BP2 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CHCHD1Q96BP2 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
CHCHD1Q96BP2 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC16.38■□□□□ 0.21
CHCHD1Q96BP2 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC16.38■□□□□ 0.21
CHCHD1Q96BP2 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
CHCHD1Q96BP2 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CHCHD1Q96BP2 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CHCHD1Q96BP2 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CHCHD1Q96BP2 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CHCHD1Q96BP2 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC16.37■□□□□ 0.21
CHCHD1Q96BP2 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CHCHD1Q96BP2 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC16.37■□□□□ 0.21
CHCHD1Q96BP2 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC16.37■□□□□ 0.21
CHCHD1Q96BP2 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
CHCHD1Q96BP2 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
CHCHD1Q96BP2 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC16.37■□□□□ 0.21
CHCHD1Q96BP2 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
CHCHD1Q96BP2 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CHCHD1Q96BP2 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
CHCHD1Q96BP2 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
CHCHD1Q96BP2 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CHCHD1Q96BP2 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
CHCHD1Q96BP2 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CHCHD1Q96BP2 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
CHCHD1Q96BP2 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
CHCHD1Q96BP2 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CHCHD1Q96BP2 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CHCHD1Q96BP2 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CHCHD1Q96BP2 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
CHCHD1Q96BP2 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
CHCHD1Q96BP2 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CHCHD1Q96BP2 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
CHCHD1Q96BP2 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
CHCHD1Q96BP2 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
CHCHD1Q96BP2 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CHCHD1Q96BP2 EI24-213ENST00000618552 1747 ntTSL 5 BASIC16.36■□□□□ 0.21
CHCHD1Q96BP2 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CHCHD1Q96BP2 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
CHCHD1Q96BP2 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
CHCHD1Q96BP2 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CHCHD1Q96BP2 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC16.36■□□□□ 0.21
CHCHD1Q96BP2 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CHCHD1Q96BP2 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CHCHD1Q96BP2 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CHCHD1Q96BP2 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC16.35■□□□□ 0.21
CHCHD1Q96BP2 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
CHCHD1Q96BP2 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CHCHD1Q96BP2 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC16.35■□□□□ 0.21
CHCHD1Q96BP2 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CHCHD1Q96BP2 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC16.35■□□□□ 0.21
CHCHD1Q96BP2 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
CHCHD1Q96BP2 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
CHCHD1Q96BP2 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC16.35■□□□□ 0.21
CHCHD1Q96BP2 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CHCHD1Q96BP2 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CHCHD1Q96BP2 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC16.35■□□□□ 0.21
CHCHD1Q96BP2 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC16.35■□□□□ 0.21
CHCHD1Q96BP2 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CHCHD1Q96BP2 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC16.34■□□□□ 0.21
CHCHD1Q96BP2 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CHCHD1Q96BP2 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC16.34■□□□□ 0.21
CHCHD1Q96BP2 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CHCHD1Q96BP2 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms