Protein–RNA interactions for Protein: Q6MZP7

LIN54, Protein lin-54 homolog, humanhuman

Predictions only

Length 749 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54Q6MZP7 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC19.2■□□□□ 0.66
LIN54Q6MZP7 AC133552.2-201ENST00000619106 1032 ntBASIC19.2■□□□□ 0.66
LIN54Q6MZP7 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
LIN54Q6MZP7 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
LIN54Q6MZP7 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC19.19■□□□□ 0.66
LIN54Q6MZP7 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
LIN54Q6MZP7 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
LIN54Q6MZP7 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC19.19■□□□□ 0.66
LIN54Q6MZP7 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
LIN54Q6MZP7 HES4-204ENST00000484667 667 ntTSL 3 BASIC19.19■□□□□ 0.66
LIN54Q6MZP7 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
LIN54Q6MZP7 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
LIN54Q6MZP7 HYI-213ENST00000583037 1322 ntTSL 5 BASIC19.19■□□□□ 0.66
LIN54Q6MZP7 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
LIN54Q6MZP7 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
LIN54Q6MZP7 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC19.19■□□□□ 0.66
LIN54Q6MZP7 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
LIN54Q6MZP7 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LIN54Q6MZP7 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
LIN54Q6MZP7 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC19.18■□□□□ 0.66
LIN54Q6MZP7 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LIN54Q6MZP7 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
LIN54Q6MZP7 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LIN54Q6MZP7 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
LIN54Q6MZP7 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
LIN54Q6MZP7 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
LIN54Q6MZP7 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC19.18■□□□□ 0.66
LIN54Q6MZP7 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LIN54Q6MZP7 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC19.17■□□□□ 0.66
LIN54Q6MZP7 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC19.17■□□□□ 0.66
LIN54Q6MZP7 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
LIN54Q6MZP7 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LIN54Q6MZP7 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
LIN54Q6MZP7 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC19.17■□□□□ 0.66
LIN54Q6MZP7 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LIN54Q6MZP7 RAP2CP1-202ENST00000605179 643 ntBASIC19.17■□□□□ 0.66
LIN54Q6MZP7 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
LIN54Q6MZP7 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LIN54Q6MZP7 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
LIN54Q6MZP7 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
LIN54Q6MZP7 ECEL1P1-201ENST00000373592 1742 ntBASIC19.17■□□□□ 0.66
LIN54Q6MZP7 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
LIN54Q6MZP7 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
LIN54Q6MZP7 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
LIN54Q6MZP7 AC009831.1-201ENST00000580420 1582 ntBASIC19.16■□□□□ 0.66
LIN54Q6MZP7 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC19.16■□□□□ 0.66
LIN54Q6MZP7 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
LIN54Q6MZP7 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
LIN54Q6MZP7 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
LIN54Q6MZP7 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
LIN54Q6MZP7 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
LIN54Q6MZP7 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
LIN54Q6MZP7 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
LIN54Q6MZP7 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
LIN54Q6MZP7 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
LIN54Q6MZP7 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
LIN54Q6MZP7 WWC2-AS2-201ENST00000578387 2183 ntBASIC19.15■□□□□ 0.66
LIN54Q6MZP7 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
LIN54Q6MZP7 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
LIN54Q6MZP7 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC19.15■□□□□ 0.66
LIN54Q6MZP7 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC19.15■□□□□ 0.66
LIN54Q6MZP7 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
LIN54Q6MZP7 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
LIN54Q6MZP7 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
LIN54Q6MZP7 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC19.15■□□□□ 0.66
LIN54Q6MZP7 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
LIN54Q6MZP7 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
LIN54Q6MZP7 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC19.14■□□□□ 0.66
LIN54Q6MZP7 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
LIN54Q6MZP7 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC19.14■□□□□ 0.66
LIN54Q6MZP7 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
LIN54Q6MZP7 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
LIN54Q6MZP7 AC007375.3-201ENST00000600936 2314 ntBASIC19.14■□□□□ 0.65
LIN54Q6MZP7 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
LIN54Q6MZP7 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
LIN54Q6MZP7 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
LIN54Q6MZP7 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
LIN54Q6MZP7 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
LIN54Q6MZP7 FOXO3B-201ENST00000395675 1928 ntBASIC19.13■□□□□ 0.65
LIN54Q6MZP7 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
LIN54Q6MZP7 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
LIN54Q6MZP7 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
LIN54Q6MZP7 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
LIN54Q6MZP7 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC19.13■□□□□ 0.65
LIN54Q6MZP7 ABHD17AP5-201ENST00000580133 923 ntBASIC19.13■□□□□ 0.65
LIN54Q6MZP7 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
LIN54Q6MZP7 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
LIN54Q6MZP7 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
LIN54Q6MZP7 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
LIN54Q6MZP7 ANOS2P-203ENST00000472227 1816 ntBASIC19.13■□□□□ 0.65
LIN54Q6MZP7 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
LIN54Q6MZP7 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
LIN54Q6MZP7 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
LIN54Q6MZP7 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
LIN54Q6MZP7 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
LIN54Q6MZP7 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC19.12■□□□□ 0.65
LIN54Q6MZP7 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
LIN54Q6MZP7 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
LIN54Q6MZP7 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
LIN54Q6MZP7 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms