Protein–RNA interactions for Protein: P48729

CSNK1A1, Casein kinase I isoform alpha, humanhuman

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1P48729 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC19.98■□□□□ 0.79
CSNK1A1P48729 MIR6724-1-201ENST00000616420 92 ntBASIC19.98■□□□□ 0.79
CSNK1A1P48729 MIR6724-2-201ENST00000616483 92 ntBASIC19.98■□□□□ 0.79
CSNK1A1P48729 MIR6724-4-201ENST00000617390 92 ntBASIC19.98■□□□□ 0.79
CSNK1A1P48729 MIR6724-3-201ENST00000622482 92 ntBASIC19.98■□□□□ 0.79
CSNK1A1P48729 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CSNK1A1P48729 AC092068.2-201ENST00000590491 1708 ntBASIC19.98■□□□□ 0.79
CSNK1A1P48729 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CSNK1A1P48729 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC19.98■□□□□ 0.79
CSNK1A1P48729 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
CSNK1A1P48729 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
CSNK1A1P48729 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC19.97■□□□□ 0.79
CSNK1A1P48729 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
CSNK1A1P48729 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC19.97■□□□□ 0.79
CSNK1A1P48729 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC19.97■□□□□ 0.79
CSNK1A1P48729 H19-210ENST00000439725 1929 ntTSL 2 BASIC19.97■□□□□ 0.79
CSNK1A1P48729 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CSNK1A1P48729 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
CSNK1A1P48729 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
CSNK1A1P48729 CASK-201ENST00000378154 2494 ntTSL 5 BASIC19.97■□□□□ 0.79
CSNK1A1P48729 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CSNK1A1P48729 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
CSNK1A1P48729 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
CSNK1A1P48729 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CSNK1A1P48729 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CSNK1A1P48729 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
CSNK1A1P48729 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CSNK1A1P48729 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC19.96■□□□□ 0.79
CSNK1A1P48729 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC19.96■□□□□ 0.79
CSNK1A1P48729 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC19.96■□□□□ 0.79
CSNK1A1P48729 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
CSNK1A1P48729 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CSNK1A1P48729 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
CSNK1A1P48729 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
CSNK1A1P48729 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CSNK1A1P48729 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
CSNK1A1P48729 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC19.95■□□□□ 0.78
CSNK1A1P48729 NFE2L3P1-201ENST00000588207 1959 ntBASIC19.95■□□□□ 0.78
CSNK1A1P48729 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
CSNK1A1P48729 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
CSNK1A1P48729 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC19.94■□□□□ 0.78
CSNK1A1P48729 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CSNK1A1P48729 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
CSNK1A1P48729 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC19.94■□□□□ 0.78
CSNK1A1P48729 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CSNK1A1P48729 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CSNK1A1P48729 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CSNK1A1P48729 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
CSNK1A1P48729 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CSNK1A1P48729 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC19.94■□□□□ 0.78
CSNK1A1P48729 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC19.94■□□□□ 0.78
CSNK1A1P48729 GRAMD4P7-201ENST00000578182 1232 ntBASIC19.94■□□□□ 0.78
CSNK1A1P48729 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
CSNK1A1P48729 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
CSNK1A1P48729 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CSNK1A1P48729 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CSNK1A1P48729 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CSNK1A1P48729 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
CSNK1A1P48729 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
CSNK1A1P48729 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
CSNK1A1P48729 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC19.94■□□□□ 0.78
CSNK1A1P48729 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC19.93■□□□□ 0.78
CSNK1A1P48729 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CSNK1A1P48729 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CSNK1A1P48729 AC079630.1-202ENST00000618127 1840 ntBASIC19.93■□□□□ 0.78
CSNK1A1P48729 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CSNK1A1P48729 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC19.93■□□□□ 0.78
CSNK1A1P48729 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
CSNK1A1P48729 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC19.93■□□□□ 0.78
CSNK1A1P48729 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC19.93■□□□□ 0.78
CSNK1A1P48729 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CSNK1A1P48729 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC19.93■□□□□ 0.78
CSNK1A1P48729 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CSNK1A1P48729 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
CSNK1A1P48729 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC19.92■□□□□ 0.78
CSNK1A1P48729 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
CSNK1A1P48729 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CSNK1A1P48729 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CSNK1A1P48729 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CSNK1A1P48729 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC19.92■□□□□ 0.78
CSNK1A1P48729 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CSNK1A1P48729 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CSNK1A1P48729 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CSNK1A1P48729 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC19.92■□□□□ 0.78
CSNK1A1P48729 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CSNK1A1P48729 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CSNK1A1P48729 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC19.92■□□□□ 0.78
CSNK1A1P48729 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC19.92■□□□□ 0.78
CSNK1A1P48729 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
CSNK1A1P48729 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CSNK1A1P48729 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CSNK1A1P48729 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
CSNK1A1P48729 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CSNK1A1P48729 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CSNK1A1P48729 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CSNK1A1P48729 AK3-203ENST00000447596 705 ntTSL 2 BASIC19.91■□□□□ 0.78
CSNK1A1P48729 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC19.91■□□□□ 0.78
CSNK1A1P48729 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC19.91■□□□□ 0.78
CSNK1A1P48729 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CSNK1A1P48729 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 49.4 ms