Protein–RNA interactions for Protein: P26368

U2AF2, Splicing factor U2AF 65 kDa subunit, humanhuman

Known RBP eCLIP

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF2P26368 SRGAP1-207ENST00000631006 8406 ntTSL 5 BASIC6.89□□□□□ -1.314e-7■■■■■ 30.7
U2AF2P26368 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.394e-7■■■■■ 30.7
U2AF2P26368 STXBP1-207ENST00000626333 667 ntTSL 45.37□□□□□ -1.554e-7■■■■■ 30.7
U2AF2P26368 USP16-205ENST00000474835 3835 ntTSL 1 (best)5□□□□□ -1.614e-8■■■■■ 30.7
U2AF2P26368 PAPOLA-208ENST00000554135 735 ntTSL 33.84□□□□□ -1.794e-7■■■■■ 30.7
U2AF2P26368 PAPOLA-222ENST00000556787 806 ntTSL 22.43□□□□□ -2.024e-7■■■■■ 30.7
U2AF2P26368 MAGI2-230ENST00000636989 666 ntTSL 52.42□□□□□ -2.024e-7■■■■■ 30.7
U2AF2P26368 ZNF189-203ENST00000374861 3134 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.13e-10■■■■■ 30.7
U2AF2P26368 ZNF189-204ENST00000615466 2316 ntTSL 3 BASIC11.41□□□□□ -0.583e-10■■■■■ 30.7
U2AF2P26368 ZNF189-202ENST00000339664 3021 ntTSL 1 (best) BASIC9.53□□□□□ -0.883e-10■■■■■ 30.7
U2AF2P26368 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC6.61□□□□□ -1.353e-10■■■■■ 30.7
U2AF2P26368 SBF2-210ENST00000530741 993 ntTSL 56.57□□□□□ -1.362e-7■■■■■ 30.7
U2AF2P26368 CTC1-207ENST00000580299 375 ntAPPRIS ALT2 TSL 52.64□□□□□ -1.994e-8■■■■■ 30.7
U2AF2P26368 AFG3L1P-217ENST00000557444 2447 ntBASIC23.1■■□□□ 1.293e-10■■■■■ 30.7
U2AF2P26368 AFG3L1P-211ENST00000436447 3003 ntTSL 521.88■■□□□ 1.093e-10■■■■■ 30.7
U2AF2P26368 AFG3L1P-215ENST00000457926 2919 ntTSL 221.74■■□□□ 1.073e-10■■■■■ 30.7
U2AF2P26368 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC20.98■□□□□ 0.953e-10■■■■■ 30.7
U2AF2P26368 AFG3L1P-204ENST00000421164 1706 ntTSL 1 (best)19.98■□□□□ 0.793e-10■■■■■ 30.7
U2AF2P26368 AFG3L1P-212ENST00000437774 3134 ntTSL 215.76■□□□□ 0.113e-10■■■■■ 30.7
U2AF2P26368 AFG3L1P-202ENST00000388970 1466 ntTSL 1 (best)14.76□□□□□ -0.053e-10■■■■■ 30.7
U2AF2P26368 AFG3L1P-205ENST00000421780 526 ntTSL 1 (best)14.72□□□□□ -0.053e-10■■■■■ 30.7
U2AF2P26368 AFG3L1P-206ENST00000423684 595 ntTSL 1 (best)14.72□□□□□ -0.053e-10■■■■■ 30.7
U2AF2P26368 AFG3L1P-216ENST00000458301 2298 ntTSL 212.92□□□□□ -0.344e-13■■■■■ 30.7
U2AF2P26368 CD2AP-202ENST00000463175 707 ntTSL 25.99□□□□□ -1.453e-10■■■■■ 30.7
U2AF2P26368 ZBTB40-203ENST00000400239 1855 ntTSL 512.31□□□□□ -0.442e-9■■■■■ 30.7
U2AF2P26368 ZBTB40-204ENST00000404138 8992 ntAPPRIS P3 TSL 5 BASIC10.64□□□□□ -0.712e-9■■■■■ 30.7
U2AF2P26368 ZBTB40-202ENST00000375647 8685 ntAPPRIS P3 TSL 1 (best) BASIC10.1□□□□□ -0.792e-9■■■■■ 30.7
U2AF2P26368 ZBTB40-201ENST00000374651 8368 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.792e-9■■■■■ 30.7
U2AF2P26368 TMEM161B-AS1-203ENST00000501869 684 ntTSL 1 (best)20.36■□□□□ 0.851e-9■■■■■ 30.7
U2AF2P26368 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC17.5■□□□□ 0.391e-9■■■■■ 30.7
U2AF2P26368 TMEM161B-AS1-205ENST00000504769 548 ntTSL 417.5■□□□□ 0.391e-9■■■■■ 30.7
U2AF2P26368 TMEM161B-AS1-206ENST00000504922 585 ntTSL 217.3■□□□□ 0.361e-9■■■■■ 30.7
U2AF2P26368 TMEM161B-AS1-210ENST00000510087 590 ntTSL 315.56■□□□□ 0.081e-9■■■■■ 30.7
U2AF2P26368 TMEM161B-AS1-207ENST00000506584 717 ntTSL 3 BASIC10.98□□□□□ -0.651e-9■■■■■ 30.7
U2AF2P26368 TMEM161B-AS1-201ENST00000496733 409 ntTSL 39.23□□□□□ -0.931e-9■■■■■ 30.7
U2AF2P26368 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC5.34□□□□□ -1.551e-9■■■■■ 30.7
U2AF2P26368 TMEM161B-AS1-211ENST00000512724 570 ntTSL 35.18□□□□□ -1.581e-9■■■■■ 30.7
U2AF2P26368 KIAA1468-204ENST00000587198 583 ntTSL 57.18□□□□□ -1.262e-6■■■■■ 30.6
U2AF2P26368 AC079062.1-205ENST00000582571 744 ntTSL 313.72□□□□□ -0.211e-6■■■■■ 30.6
U2AF2P26368 AC079062.1-204ENST00000583405 474 ntTSL 28.88□□□□□ -0.991e-6■■■■■ 30.6
U2AF2P26368 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.222e-7■■■■■ 30.6
U2AF2P26368 POMP-202ENST00000460403 1428 ntTSL 3 BASIC4.48□□□□□ -1.692e-7■■■■■ 30.6
U2AF2P26368 RALGAPA1-205ENST00000553917 723 ntTSL 32.46□□□□□ -2.021e-8■■■■■ 30.6
U2AF2P26368 EWSR1-213ENST00000447973 582 ntTSL 415.04■□□□□ -05e-12■■■■■ 30.6
U2AF2P26368 EWSR1-210ENST00000436425 553 ntTSL 414.83□□□□□ -0.045e-12■■■■■ 30.6
U2AF2P26368 TTN-AS1-269ENST00000629117 710 ntTSL 510.02□□□□□ -0.813e-10■■■■■ 30.5
U2AF2P26368 TTN-AS1-261ENST00000626517 418 ntTSL 54.06□□□□□ -1.763e-10■■■■■ 30.5
U2AF2P26368 MRPL48-210ENST00000542303 661 ntTSL 3 BASIC15.79■□□□□ 0.121e-9■■■■■ 30.5
U2AF2P26368 MRPL48-201ENST00000310614 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.061e-9■■■■■ 30.5
U2AF2P26368 MRPL48-214ENST00000544819 742 ntTSL 214.45□□□□□ -0.11e-9■■■■■ 30.5
U2AF2P26368 MRPL48-203ENST00000398483 1058 ntTSL 3 BASIC13.48□□□□□ -0.251e-9■■■■■ 30.5
U2AF2P26368 MRPL48-213ENST00000544140 996 ntTSL 213.22□□□□□ -0.291e-9■■■■■ 30.5
U2AF2P26368 MRPL48-206ENST00000508278 1560 ntTSL 212.71□□□□□ -0.371e-9■■■■■ 30.5
U2AF2P26368 MRPL48-209ENST00000540162 1004 ntTSL 512.55□□□□□ -0.41e-9■■■■■ 30.5
U2AF2P26368 MRPL48-202ENST00000314282 1922 ntTSL 1 (best) BASIC11.17□□□□□ -0.621e-9■■■■■ 30.5
U2AF2P26368 MRPL48-205ENST00000497094 531 ntTSL 410.34□□□□□ -0.751e-9■■■■■ 30.5
U2AF2P26368 MRPL48-204ENST00000411840 1197 ntTSL 1 (best) BASIC9.95□□□□□ -0.821e-9■■■■■ 30.5
U2AF2P26368 MRPL48-207ENST00000535277 598 ntTSL 37.76□□□□□ -1.171e-9■■■■■ 30.5
U2AF2P26368 MRPL48-212ENST00000543374 463 ntTSL 33.17□□□□□ -1.91e-9■■■■■ 30.5
U2AF2P26368 MRPL48-208ENST00000537007 287 ntTSL 32.89□□□□□ -1.951e-9■■■■■ 30.5
U2AF2P26368 MRPL48-211ENST00000543058 699 ntTSL 32.65□□□□□ -1.991e-9■■■■■ 30.5
U2AF2P26368 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.268e-9■■■■■ 30.5
U2AF2P26368 DNHD1-202ENST00000354685 3205 ntTSL 1 (best) BASIC12.13□□□□□ -0.477e-9■■■■■ 30.5
U2AF2P26368 ROCK2-208ENST00000493096 461 ntTSL 20.56□□□□□ -2.325e-8■■■■■ 30.5
U2AF2P26368 ZUFSP-202ENST00000368576 2195 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.023e-10■■■■■ 30.5
U2AF2P26368 SRRM2-203ENST00000570655 575 ntTSL 29.99□□□□□ -0.814e-18■■■■■ 30.5
U2AF2P26368 SRRM2-214ENST00000573451 441 ntTSL 38.72□□□□□ -1.014e-18■■■■■ 30.5
U2AF2P26368 RNF213-209ENST00000559864 594 ntTSL 311.02□□□□□ -0.651e-9■■■■■ 30.5
U2AF2P26368 CLTC-207ENST00000483176 760 ntTSL 35.5□□□□□ -1.532e-8■■■■■ 30.5
U2AF2P26368 RPL37-202ENST00000504562 505 ntTSL 212.77□□□□□ -0.373e-10■■■■■ 30.5
U2AF2P26368 RPL37-203ENST00000507642 425 ntTSL 38.69□□□□□ -1.023e-10■■■■■ 30.5
U2AF2P26368 RPL37-205ENST00000509877 637 ntTSL 5 BASIC8.65□□□□□ -1.023e-10■■■■■ 30.5
U2AF2P26368 NKTR-201ENST00000232978 7343 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.351e-8■■■■■ 30.4
U2AF2P26368 NKTR-211ENST00000468735 7964 ntTSL 28.27□□□□□ -1.091e-8■■■■■ 30.4
U2AF2P26368 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC4.19□□□□□ -1.741e-8■■■■■ 30.4
U2AF2P26368 NKTR-202ENST00000429888 7325 ntTSL 54.14□□□□□ -1.751e-8■■■■■ 30.4
U2AF2P26368 RAP1GDS1-219ENST00000514122 579 ntTSL 417.59■□□□□ 0.413e-6■■■■■ 30.4
U2AF2P26368 RAP1GDS1-213ENST00000509011 549 ntTSL 416.09■□□□□ 0.173e-6■■■■■ 30.4
U2AF2P26368 RAP1GDS1-209ENST00000505378 934 ntTSL 213.23□□□□□ -0.293e-6■■■■■ 30.4
U2AF2P26368 RAP1GDS1-211ENST00000508213 558 ntTSL 412.3□□□□□ -0.443e-6■■■■■ 30.4
U2AF2P26368 RAP1GDS1-218ENST00000512857 583 ntTSL 48.95□□□□□ -0.983e-6■■■■■ 30.4
U2AF2P26368 RAP1GDS1-220ENST00000514139 1103 ntTSL 58.76□□□□□ -1.013e-6■■■■■ 30.4
U2AF2P26368 RAP1GDS1-210ENST00000507303 875 ntTSL 36.94□□□□□ -1.33e-6■■■■■ 30.4
U2AF2P26368 RAP1GDS1-216ENST00000511212 555 ntTSL 45.72□□□□□ -1.493e-6■■■■■ 30.4
U2AF2P26368 RAP1GDS1-215ENST00000510870 537 ntTSL 44.18□□□□□ -1.743e-6■■■■■ 30.4
U2AF2P26368 RAP1GDS1-208ENST00000503745 433 ntTSL 33.99□□□□□ -1.773e-6■■■■■ 30.4
U2AF2P26368 RAP1GDS1-214ENST00000509501 757 ntTSL 32.98□□□□□ -1.933e-6■■■■■ 30.4
U2AF2P26368 EHBP1-220ENST00000496857 1262 ntTSL 1 (best)12.45□□□□□ -0.426e-15■■■■■ 30.4
U2AF2P26368 PDS5B-207ENST00000482955 581 ntTSL 323.12■■□□□ 1.295e-8■■■■■ 30.4
U2AF2P26368 PRMT9-204ENST00000514886 2674 ntTSL 222.84■■□□□ 1.255e-8■■■■■ 30.4
U2AF2P26368 CD99P1-205ENST00000527459 561 ntBASIC22.14■■□□□ 1.135e-8■■■■■ 30.4
U2AF2P26368 UBE3A-214ENST00000627018 474 ntTSL 320.65■□□□□ 0.95e-8■■■■■ 30.4
U2AF2P26368 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC20.43■□□□□ 0.865e-8■■■■■ 30.4
U2AF2P26368 SCAF11-206ENST00000474828 757 ntTSL 219.27■□□□□ 0.685e-8■■■■■ 30.4
U2AF2P26368 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.65e-8■■■■■ 30.4
U2AF2P26368 RNFT1-204ENST00000482446 1893 ntTSL 1 (best)18.31■□□□□ 0.525e-8■■■■■ 30.4
U2AF2P26368 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.525e-8■■■■■ 30.4
U2AF2P26368 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.56e-15■■■■■ 30.4
U2AF2P26368 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.465e-8■■■■■ 30.4
U2AF2P26368 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.465e-8■■■■■ 30.4
Retrieved 100 of 36,523 protein–RNA pairs in 620.7 ms