RNA–Protein interactions for RNA: ENST00000508213.5

RAP1GDS1-211, Transcript of Rap1 GTPase-GDP dissociation stimulator 1, humanhuman

TSL 4

Gene RAP1GDS1, Length 558 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAP1GDS1-211ENST00000508213 NISCHQ9Y2I1 1504 aa29.11■■■□□ 2.25
RAP1GDS1-211ENST00000508213 ABCC9O60706 1549 aa27.06■■□□□ 1.92
RAP1GDS1-211ENST00000508213 CCDC180Q9P1Z9 1646 aa26.28■■□□□ 1.8
RAP1GDS1-211ENST00000508213 DNAJC5BQ9UF47 199 aa26.16■■□□□ 1.78
RAP1GDS1-211ENST00000508213 RB1CC1Q8TDY2 1594 aa25.33■■□□□ 1.65
RAP1GDS1-211ENST00000508213 PABPN1Q86U42 306 aaKnown RBP eCLIP25.17■■□□□ 1.62
RAP1GDS1-211ENST00000508213 NACADO15069 1562 aa25.01■■□□□ 1.59
RAP1GDS1-211ENST00000508213 UNC13AQ9UPW8 1703 aa24.92■■□□□ 1.58
RAP1GDS1-211ENST00000508213 DCAF8L2P0C7V8 631 aa24.88■■□□□ 1.57
RAP1GDS1-211ENST00000508213 BICRAQ9NZM4 1560 aa24.82■■□□□ 1.56
RAP1GDS1-211ENST00000508213 MYO15BQ96JP2 1530 aa24.44■■□□□ 1.5
RAP1GDS1-211ENST00000508213 CECR2Q9BXF3 1484 aa24.39■■□□□ 1.5
RAP1GDS1-211ENST00000508213 CC2D2AQ9P2K1 1620 aa24.39■■□□□ 1.49
RAP1GDS1-211ENST00000508213 DNAJC5Q9H3Z4 198 aa24.31■■□□□ 1.48
RAP1GDS1-211ENST00000508213 EIF4G1Q04637 1599 aaKnown RBP24.16■■□□□ 1.46
RAP1GDS1-211ENST00000508213 SHROOM4Q9ULL8 1493 aa24.13■■□□□ 1.45
RAP1GDS1-211ENST00000508213 SCRIBQ14160 1630 aa24.02■■□□□ 1.44
RAP1GDS1-211ENST00000508213 ZCCHC6Q5VYS8 1495 aaKnown RBP23.97■■□□□ 1.43
RAP1GDS1-211ENST00000508213 DCAF1Q9Y4B6 1507 aa23.92■■□□□ 1.42
RAP1GDS1-211ENST00000508213 CUX2O14529 1486 aa23.44■■□□□ 1.34
RAP1GDS1-211ENST00000508213 ERCC6Q03468 1493 aa23.27■■□□□ 1.32
RAP1GDS1-211ENST00000508213 NCAPD3P42695 1498 aa23.17■■□□□ 1.3
RAP1GDS1-211ENST00000508213 NESP48681 1621 aa23.14■■□□□ 1.29
RAP1GDS1-211ENST00000508213 ATAD2BQ9ULI0 1458 aa23.04■■□□□ 1.28
RAP1GDS1-211ENST00000508213 TRIM41Q8WV44 630 aa22.96■■□□□ 1.27
RAP1GDS1-211ENST00000508213 THOC2Q8NI27 1593 aaKnown RBP22.93■■□□□ 1.26
RAP1GDS1-211ENST00000508213 HMGXB3Q12766 1538 aa22.87■■□□□ 1.25
RAP1GDS1-211ENST00000508213 SMARCA4P51532 1647 aa22.83■■□□□ 1.25
RAP1GDS1-211ENST00000508213 SMARCA2P51531 1590 aa22.83■■□□□ 1.25
RAP1GDS1-211ENST00000508213 KIF21AQ7Z4S6 1674 aa22.74■■□□□ 1.23
RAP1GDS1-211ENST00000508213 BAZ1BQ9UIG0 1483 aaKnown RBP22.71■■□□□ 1.23
RAP1GDS1-211ENST00000508213 LAMC3Q9Y6N6 1575 aa22.67■■□□□ 1.22
RAP1GDS1-211ENST00000508213 PEG3Q9GZU2 1588 aa22.59■■□□□ 1.21
RAP1GDS1-211ENST00000508213 PDS5BQ9NTI5 1447 aa22.56■■□□□ 1.2
RAP1GDS1-211ENST00000508213 BAZ1AQ9NRL2 1556 aaPredicted RBP22.55■■□□□ 1.2
RAP1GDS1-211ENST00000508213 MROH2BQ7Z745 1585 aa22.5■■□□□ 1.19
RAP1GDS1-211ENST00000508213 MRC2Q9UBG0 1479 aa22.45■■□□□ 1.18
RAP1GDS1-211ENST00000508213 WDR62O43379 1518 aa22.44■■□□□ 1.18
RAP1GDS1-211ENST00000508213 CADPSQ9ULU8 1353 aa22.43■■□□□ 1.18
RAP1GDS1-211ENST00000508213 OSCARQ8IYS5 282 aa22.33■■□□□ 1.17
RAP1GDS1-211ENST00000508213 CEP164Q9UPV0 1460 aa22.2■■□□□ 1.14
RAP1GDS1-211ENST00000508213 WIZO95785 1651 aa22.2■■□□□ 1.14
RAP1GDS1-211ENST00000508213 FANCD2Q9BXW9 1451 aa22.17■■□□□ 1.14
RAP1GDS1-211ENST00000508213 RIMBP3CA6NJZ7 1639 aa22.16■■□□□ 1.14
RAP1GDS1-211ENST00000508213 RIMBP3BA6NNM3 1639 aa22.16■■□□□ 1.14
RAP1GDS1-211ENST00000508213 RIMBP3Q9UFD9 1639 aa22.16■■□□□ 1.14
RAP1GDS1-211ENST00000508213 URB2Q14146 1524 aaKnown RBP22.11■■□□□ 1.13
RAP1GDS1-211ENST00000508213 CFTRP13569 1480 aa22.05■■□□□ 1.12
RAP1GDS1-211ENST00000508213 ARHGEF11O15085 1522 aa22■■□□□ 1.11
RAP1GDS1-211ENST00000508213 ZNF608Q9ULD9 1512 aaPredicted RBP21.98■■□□□ 1.11
RAP1GDS1-211ENST00000508213 CYB5RLQ6IPT4 315 aa21.92■■□□□ 1.1
RAP1GDS1-211ENST00000508213 TRHP20396 242 aaPredicted RBP21.81■■□□□ 1.08
RAP1GDS1-211ENST00000508213 ARAP1Q96P48 1450 aa21.78■■□□□ 1.08
RAP1GDS1-211ENST00000508213 IFT140Q96RY7 1462 aa21.78■■□□□ 1.08
RAP1GDS1-211ENST00000508213 RSF1Q96T23 1441 aaPredicted RBP21.78■■□□□ 1.08
RAP1GDS1-211ENST00000508213 TOP2AP11388 1531 aaKnown RBP21.75■■□□□ 1.07
RAP1GDS1-211ENST00000508213 TOPBP1Q92547 1522 aa21.71■■□□□ 1.07
RAP1GDS1-211ENST00000508213 EIF4G3O43432 1585 aaKnown RBP21.71■■□□□ 1.07
RAP1GDS1-211ENST00000508213 CHD1O14646 1710 aa21.7■■□□□ 1.06
RAP1GDS1-211ENST00000508213 PRDM2Q13029 1718 aa21.69■■□□□ 1.06
RAP1GDS1-211ENST00000508213 AQRO60306 1485 aaKnown RBP eCLIP21.67■■□□□ 1.06
RAP1GDS1-211ENST00000508213 CCDC88BA6NC98 1476 aa21.61■■□□□ 1.05
RAP1GDS1-211ENST00000508213 TARBP1Q13395 1621 aaKnown RBP21.59■■□□□ 1.05
RAP1GDS1-211ENST00000508213 FBLN2P98095 1184 aa21.58■■□□□ 1.05
RAP1GDS1-211ENST00000508213 AEBP2Q6ZN18 517 aaPredicted RBP21.55■■□□□ 1.04
RAP1GDS1-211ENST00000508213 DNMBPQ6XZF7 1577 aa21.52■■□□□ 1.04
RAP1GDS1-211ENST00000508213 ABCC8Q09428 1581 aa21.48■■□□□ 1.03
RAP1GDS1-211ENST00000508213 RAD54L2Q9Y4B4 1467 aa21.46■■□□□ 1.03
RAP1GDS1-211ENST00000508213 POLA1P09884 1462 aaPredicted RBP21.45■■□□□ 1.02
RAP1GDS1-211ENST00000508213 TDRD9Q8NDG6 1382 aaKnown RBP21.44■■□□□ 1.02
RAP1GDS1-211ENST00000508213 CLASP1Q7Z460 1538 aa21.44■■□□□ 1.02
RAP1GDS1-211ENST00000508213 SNAPC4Q5SXM2 1469 aa21.36■■□□□ 1.01
RAP1GDS1-211ENST00000508213 SOGA1O94964 1423 aa21.33■■□□□ 1.01
RAP1GDS1-211ENST00000508213 CHMP7Q8WUX9 453 aaPredicted RBP21.28■■□□□ 1
RAP1GDS1-211ENST00000508213 SYNJ1O43426 1573 aa21.25■□□□□ 0.99
RAP1GDS1-211ENST00000508213 GAPVD1Q14C86 1478 aa21.23■□□□□ 0.99
RAP1GDS1-211ENST00000508213 FGD5Q6ZNL6 1462 aa21.22■□□□□ 0.99
RAP1GDS1-211ENST00000508213 MAGI1Q96QZ7 1491 aaPredicted RBP21.2■□□□□ 0.98
RAP1GDS1-211ENST00000508213 SYNJ2O15056 1496 aa21.18■□□□□ 0.98
RAP1GDS1-211ENST00000508213 ERCC6L2Q5T890 1561 aa21.18■□□□□ 0.98
RAP1GDS1-211ENST00000508213 GRIN2BQ13224 1484 aa21.16■□□□□ 0.98
RAP1GDS1-211ENST00000508213 CUX1P39880 1505 aa21.15■□□□□ 0.98
RAP1GDS1-211ENST00000508213 WDR97A6NE52 1622 aa21.13■□□□□ 0.97
RAP1GDS1-211ENST00000508213 PBRM1Q86U86 1689 aa21.06■□□□□ 0.96
RAP1GDS1-211ENST00000508213 KIF13AQ9H1H9 1805 aa20.99■□□□□ 0.95
RAP1GDS1-211ENST00000508213 CEP170Q5SW79 1584 aa20.97■□□□□ 0.95
RAP1GDS1-211ENST00000508213 ABCA5Q8WWZ7 1642 aa20.96■□□□□ 0.95
RAP1GDS1-211ENST00000508213 GRIN2AQ12879 1464 aa20.92■□□□□ 0.94
RAP1GDS1-211ENST00000508213 ABCA10Q8WWZ4 1543 aa20.91■□□□□ 0.94
RAP1GDS1-211ENST00000508213 NUP160Q12769 1436 aa20.89■□□□□ 0.94
RAP1GDS1-211ENST00000508213 KDM4FA0A1W2PPD8 638 aa20.88■□□□□ 0.93
RAP1GDS1-211ENST00000508213 SHROOM2Q13796 1616 aa20.88■□□□□ 0.93
RAP1GDS1-211ENST00000508213 ILDR1Q86SU0 546 aaPredicted RBP20.87■□□□□ 0.93
RAP1GDS1-211ENST00000508213 ADAMTS12P58397 1594 aa20.83■□□□□ 0.92
RAP1GDS1-211ENST00000508213 FAM69CQ0P6D2 419 aa20.77■□□□□ 0.92
RAP1GDS1-211ENST00000508213 PRG4Q92954 1404 aaPredicted RBP20.75■□□□□ 0.91
RAP1GDS1-211ENST00000508213 ABCC10Q5T3U5 1492 aa20.74■□□□□ 0.91
RAP1GDS1-211ENST00000508213 FHAD1B1AJZ9 1412 aa20.71■□□□□ 0.91
RAP1GDS1-211ENST00000508213 JPH4Q96JJ6 628 aa20.7■□□□□ 0.9
RAP1GDS1-211ENST00000508213 DIP2BQ9P265 1576 aa20.68■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms