RNA–Protein interactions for RNA: ENST00000509011.5

RAP1GDS1-213, Transcript of Rap1 GTPase-GDP dissociation stimulator 1, humanhuman

TSL 4

Gene RAP1GDS1, Length 549 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAP1GDS1-213ENST00000509011 NISCHQ9Y2I1 1504 aa33.66■■■□□ 2.98
RAP1GDS1-213ENST00000509011 CCDC180Q9P1Z9 1646 aa29.84■■■□□ 2.37
RAP1GDS1-213ENST00000509011 ABCC9O60706 1549 aa28.68■■■□□ 2.18
RAP1GDS1-213ENST00000509011 ZCCHC6Q5VYS8 1495 aaKnown RBP28.15■■■□□ 2.1
RAP1GDS1-213ENST00000509011 DCAF1Q9Y4B6 1507 aa27.87■■■□□ 2.05
RAP1GDS1-213ENST00000509011 NACADO15069 1562 aa27.86■■■□□ 2.05
RAP1GDS1-213ENST00000509011 DCAF8L2P0C7V8 631 aa27.82■■■□□ 2.04
RAP1GDS1-213ENST00000509011 MYO15BQ96JP2 1530 aa27.82■■■□□ 2.04
RAP1GDS1-213ENST00000509011 RB1CC1Q8TDY2 1594 aa27.81■■■□□ 2.04
RAP1GDS1-213ENST00000509011 UNC13AQ9UPW8 1703 aa27.38■■□□□ 1.97
RAP1GDS1-213ENST00000509011 SCRIBQ14160 1630 aa27.24■■□□□ 1.95
RAP1GDS1-213ENST00000509011 BICRAQ9NZM4 1560 aa26.99■■□□□ 1.91
RAP1GDS1-213ENST00000509011 SHROOM4Q9ULL8 1493 aa26.81■■□□□ 1.88
RAP1GDS1-213ENST00000509011 PABPN1Q86U42 306 aaKnown RBP eCLIP26.8■■□□□ 1.88
RAP1GDS1-213ENST00000509011 EIF4G1Q04637 1599 aaKnown RBP26.21■■□□□ 1.79
RAP1GDS1-213ENST00000509011 CECR2Q9BXF3 1484 aa26.17■■□□□ 1.78
RAP1GDS1-213ENST00000509011 SMARCA4P51532 1647 aa26.09■■□□□ 1.77
RAP1GDS1-213ENST00000509011 BAZ1AQ9NRL2 1556 aaPredicted RBP26.07■■□□□ 1.76
RAP1GDS1-213ENST00000509011 CC2D2AQ9P2K1 1620 aa26.02■■□□□ 1.76
RAP1GDS1-213ENST00000509011 MROH2BQ7Z745 1585 aa25.96■■□□□ 1.75
RAP1GDS1-213ENST00000509011 DNAJC5BQ9UF47 199 aa25.88■■□□□ 1.73
RAP1GDS1-213ENST00000509011 PEG3Q9GZU2 1588 aa25.8■■□□□ 1.72
RAP1GDS1-213ENST00000509011 SMARCA2P51531 1590 aa25.78■■□□□ 1.72
RAP1GDS1-213ENST00000509011 WIZO95785 1651 aa25.77■■□□□ 1.72
RAP1GDS1-213ENST00000509011 RSF1Q96T23 1441 aaPredicted RBP25.77■■□□□ 1.72
RAP1GDS1-213ENST00000509011 ATAD2BQ9ULI0 1458 aa25.76■■□□□ 1.71
RAP1GDS1-213ENST00000509011 NCAPD3P42695 1498 aa25.65■■□□□ 1.7
RAP1GDS1-213ENST00000509011 HMGXB3Q12766 1538 aa25.64■■□□□ 1.7
RAP1GDS1-213ENST00000509011 BAZ1BQ9UIG0 1483 aaKnown RBP25.58■■□□□ 1.69
RAP1GDS1-213ENST00000509011 TOP2AP11388 1531 aaKnown RBP25.47■■□□□ 1.67
RAP1GDS1-213ENST00000509011 SUPT5HO00267 1087 aaKnown RBP25.38■■□□□ 1.65
RAP1GDS1-213ENST00000509011 CCDC88BA6NC98 1476 aa25.13■■□□□ 1.61
RAP1GDS1-213ENST00000509011 LAMC3Q9Y6N6 1575 aa24.98■■□□□ 1.59
RAP1GDS1-213ENST00000509011 PRDM2Q13029 1718 aa24.98■■□□□ 1.59
RAP1GDS1-213ENST00000509011 NESP48681 1621 aa24.97■■□□□ 1.59
RAP1GDS1-213ENST00000509011 CADPSQ9ULU8 1353 aa24.91■■□□□ 1.58
RAP1GDS1-213ENST00000509011 CFTRP13569 1480 aa24.89■■□□□ 1.57
RAP1GDS1-213ENST00000509011 KIF21AQ7Z4S6 1674 aa24.81■■□□□ 1.56
RAP1GDS1-213ENST00000509011 PDS5BQ9NTI5 1447 aa24.71■■□□□ 1.55
RAP1GDS1-213ENST00000509011 FANCD2Q9BXW9 1451 aa24.67■■□□□ 1.54
RAP1GDS1-213ENST00000509011 ERCC6Q03468 1493 aa24.66■■□□□ 1.54
RAP1GDS1-213ENST00000509011 CEP164Q9UPV0 1460 aa24.61■■□□□ 1.53
RAP1GDS1-213ENST00000509011 THOC2Q8NI27 1593 aaKnown RBP24.57■■□□□ 1.52
RAP1GDS1-213ENST00000509011 MRC2Q9UBG0 1479 aa24.49■■□□□ 1.51
RAP1GDS1-213ENST00000509011 URB2Q14146 1524 aaKnown RBP24.43■■□□□ 1.5
RAP1GDS1-213ENST00000509011 WDR62O43379 1518 aa24.42■■□□□ 1.5
RAP1GDS1-213ENST00000509011 ABCC8Q09428 1581 aa24.4■■□□□ 1.5
RAP1GDS1-213ENST00000509011 DNMBPQ6XZF7 1577 aa24.38■■□□□ 1.49
RAP1GDS1-213ENST00000509011 CUX1P39880 1505 aa24.35■■□□□ 1.49
RAP1GDS1-213ENST00000509011 TOPBP1Q92547 1522 aa24.35■■□□□ 1.49
RAP1GDS1-213ENST00000509011 BIVM-ERCC5R4GMW8 1640 aa24.31■■□□□ 1.48
RAP1GDS1-213ENST00000509011 SYNJ1O43426 1573 aa24.29■■□□□ 1.48
RAP1GDS1-213ENST00000509011 WRNQ14191 1432 aaPredicted RBP eCLIP24.28■■□□□ 1.48
RAP1GDS1-213ENST00000509011 CUX2O14529 1486 aa24.26■■□□□ 1.47
RAP1GDS1-213ENST00000509011 TOP2BQ02880 1626 aa24.26■■□□□ 1.47
RAP1GDS1-213ENST00000509011 FGD5Q6ZNL6 1462 aa24.17■■□□□ 1.46
RAP1GDS1-213ENST00000509011 POLA1P09884 1462 aaPredicted RBP24.16■■□□□ 1.46
RAP1GDS1-213ENST00000509011 TARBP1Q13395 1621 aaKnown RBP24.1■■□□□ 1.45
RAP1GDS1-213ENST00000509011 WDR97A6NE52 1622 aa24.08■■□□□ 1.45
RAP1GDS1-213ENST00000509011 IFT140Q96RY7 1462 aa24.05■■□□□ 1.44
RAP1GDS1-213ENST00000509011 RAD54L2Q9Y4B4 1467 aa24.04■■□□□ 1.44
RAP1GDS1-213ENST00000509011 SOGA1O94964 1423 aa24.01■■□□□ 1.43
RAP1GDS1-213ENST00000509011 CHIC1Q5VXU3 224 aa23.95■■□□□ 1.42
RAP1GDS1-213ENST00000509011 ABCA10Q8WWZ4 1543 aa23.94■■□□□ 1.42
RAP1GDS1-213ENST00000509011 ZNF608Q9ULD9 1512 aaPredicted RBP23.94■■□□□ 1.42
RAP1GDS1-213ENST00000509011 EIF4G3O43432 1585 aaKnown RBP23.93■■□□□ 1.42
RAP1GDS1-213ENST00000509011 TRIM41Q8WV44 630 aa23.92■■□□□ 1.42
RAP1GDS1-213ENST00000509011 ABCA5Q8WWZ7 1642 aa23.89■■□□□ 1.42
RAP1GDS1-213ENST00000509011 PBRM1Q86U86 1689 aa23.87■■□□□ 1.41
RAP1GDS1-213ENST00000509011 AQRO60306 1485 aaKnown RBP eCLIP23.82■■□□□ 1.4
RAP1GDS1-213ENST00000509011 TDRD9Q8NDG6 1382 aaKnown RBP23.82■■□□□ 1.4
RAP1GDS1-213ENST00000509011 GAPVD1Q14C86 1478 aa23.78■■□□□ 1.4
RAP1GDS1-213ENST00000509011 KIF27Q86VH2 1401 aa23.72■■□□□ 1.39
RAP1GDS1-213ENST00000509011 GRIN2BQ13224 1484 aa23.71■■□□□ 1.39
RAP1GDS1-213ENST00000509011 RUSC2Q8N2Y8 1516 aa23.69■■□□□ 1.38
RAP1GDS1-213ENST00000509011 ERICH3Q5RHP9 1530 aa23.69■■□□□ 1.38
RAP1GDS1-213ENST00000509011 SNAPC4Q5SXM2 1469 aa23.65■■□□□ 1.38
RAP1GDS1-213ENST00000509011 CHD1O14646 1710 aa23.63■■□□□ 1.37
RAP1GDS1-213ENST00000509011 MAGI1Q96QZ7 1491 aaPredicted RBP23.62■■□□□ 1.37
RAP1GDS1-213ENST00000509011 ADAMTS12P58397 1594 aa23.62■■□□□ 1.37
RAP1GDS1-213ENST00000509011 CUL7Q14999 1698 aa23.61■■□□□ 1.37
RAP1GDS1-213ENST00000509011 IGF1RP08069 1367 aa23.56■■□□□ 1.36
RAP1GDS1-213ENST00000509011 EEA1Q15075 1411 aa23.56■■□□□ 1.36
RAP1GDS1-213ENST00000509011 SYNJ2O15056 1496 aa23.51■■□□□ 1.35
RAP1GDS1-213ENST00000509011 FHAD1B1AJZ9 1412 aa23.5■■□□□ 1.35
RAP1GDS1-213ENST00000509011 FAM9AQ8IZU1 332 aaPredicted RBP23.45■■□□□ 1.34
RAP1GDS1-213ENST00000509011 CARMIL1Q5VZK9 1371 aa23.44■■□□□ 1.34
RAP1GDS1-213ENST00000509011 GRIN2AQ12879 1464 aa23.43■■□□□ 1.34
RAP1GDS1-213ENST00000509011 CSRNP3Q8WYN3 585 aa23.41■■□□□ 1.34
RAP1GDS1-213ENST00000509011 PRXQ9BXM0 1461 aa23.4■■□□□ 1.34
RAP1GDS1-213ENST00000509011 CHMP7Q8WUX9 453 aaPredicted RBP23.39■■□□□ 1.33
RAP1GDS1-213ENST00000509011 KIF21BO75037 1637 aa23.38■■□□□ 1.33
RAP1GDS1-213ENST00000509011 FBLN2P98095 1184 aa23.38■■□□□ 1.33
RAP1GDS1-213ENST00000509011 RAPGEF2Q9Y4G8 1499 aa23.37■■□□□ 1.33
RAP1GDS1-213ENST00000509011 CEP170Q5SW79 1584 aa23.35■■□□□ 1.33
RAP1GDS1-213ENST00000509011 CTTNBP2Q8WZ74 1663 aa23.31■■□□□ 1.32
RAP1GDS1-213ENST00000509011 NUP160Q12769 1436 aa23.3■■□□□ 1.32
RAP1GDS1-213ENST00000509011 CLASP1Q7Z460 1538 aa23.28■■□□□ 1.32
RAP1GDS1-213ENST00000509011 OSCARQ8IYS5 282 aa23.24■■□□□ 1.31
RAP1GDS1-213ENST00000509011 GOLGA3Q08378 1498 aa23.2■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms