RNA–Protein interactions for RNA: ENST00000355086.7

SRGAP1-201, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRGAP1, Length 23,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-201ENST00000355086 DCAF8L2P0C7V8 631 aa9.83□□□□□ -0.84
SRGAP1-201ENST00000355086 PELP1Q8IZL8 1130 aaKnown RBP9.4□□□□□ -0.9
SRGAP1-201ENST00000355086 SUPT5HO00267 1087 aaKnown RBP9.21□□□□□ -0.93
SRGAP1-201ENST00000355086 EHMT2Q96KQ7 1210 aa9.17□□□□□ -0.94
SRGAP1-201ENST00000355086 APLP2Q06481 763 aa9.08□□□□□ -0.96
SRGAP1-201ENST00000355086 ERICH6Q7L0X2 663 aa9.06□□□□□ -0.96
SRGAP1-201ENST00000355086 FAM9AQ8IZU1 332 aaPredicted RBP9.01□□□□□ -0.97
SRGAP1-201ENST00000355086 CCER1Q8TC90 406 aaPredicted RBP8.98□□□□□ -0.97
SRGAP1-201ENST00000355086 SHROOM4Q9ULL8 1493 aa8.92□□□□□ -0.98
SRGAP1-201ENST00000355086 TTBK1Q5TCY1 1321 aaPredicted RBP8.87□□□□□ -0.99
SRGAP1-201ENST00000355086 CENPBP07199 599 aaPredicted RBP8.81□□□□□ -1
SRGAP1-201ENST00000355086 PCGF6Q9BYE7 350 aa8.77□□□□□ -1.01
SRGAP1-201ENST00000355086 ATP1B4Q9UN42 357 aaPredicted RBP8.76□□□□□ -1.01
SRGAP1-201ENST00000355086 RANGAP1P46060 587 aaPredicted RBP8.75□□□□□ -1.01
SRGAP1-201ENST00000355086 NEFLP07196 543 aa8.75□□□□□ -1.01
SRGAP1-201ENST00000355086 MYT1Q01538 1121 aa8.66□□□□□ -1.02
SRGAP1-201ENST00000355086 ZEB1P37275 1124 aaPredicted RBP8.65□□□□□ -1.03
SRGAP1-201ENST00000355086 DAXXQ9UER7 740 aaPredicted RBP8.64□□□□□ -1.03
SRGAP1-201ENST00000355086 YTHDC1Q96MU7 727 aaKnown RBP8.6□□□□□ -1.03
SRGAP1-201ENST00000355086 UBTFP17480 764 aaKnown RBP8.55□□□□□ -1.04
SRGAP1-201ENST00000355086 MYT1LQ9UL68 1186 aa8.53□□□□□ -1.04
SRGAP1-201ENST00000355086 TRIM41Q8WV44 630 aa8.51□□□□□ -1.05
SRGAP1-201ENST00000355086 POLR3GLQ9BT43 218 aa8.5□□□□□ -1.05
SRGAP1-201ENST00000355086 NISCHQ9Y2I1 1504 aa8.43□□□□□ -1.06
SRGAP1-201ENST00000355086 ZNF316A6NFI3 1004 aaPredicted RBP8.41□□□□□ -1.06
SRGAP1-201ENST00000355086 SLC4A1APQ9BWU0 796 aaKnown RBP8.41□□□□□ -1.06
SRGAP1-201ENST00000355086 CNGB1Q14028 1251 aaPredicted RBP8.4□□□□□ -1.07
SRGAP1-201ENST00000355086 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.39□□□□□ -1.07
SRGAP1-201ENST00000355086 HNRNPUL2Q1KMD3 747 aaKnown RBP8.39□□□□□ -1.07
SRGAP1-201ENST00000355086 CHIC1Q5VXU3 224 aa8.39□□□□□ -1.07
SRGAP1-201ENST00000355086 CLSPNQ9HAW4 1339 aa8.37□□□□□ -1.07
SRGAP1-201ENST00000355086 PPARGC1BQ86YN6 1023 aaKnown RBP8.36□□□□□ -1.07
SRGAP1-201ENST00000355086 RTL5Q5HYW3 569 aaPredicted RBP8.36□□□□□ -1.07
SRGAP1-201ENST00000355086 ITGAEP38570 1179 aa8.34□□□□□ -1.07
SRGAP1-201ENST00000355086 ZBTB47Q9UFB7 747 aaPredicted RBP8.25□□□□□ -1.09
SRGAP1-201ENST00000355086 TRIM26Q12899 539 aaPredicted RBP8.24□□□□□ -1.09
SRGAP1-201ENST00000355086 HRCP23327 699 aa8.19□□□□□ -1.1
SRGAP1-201ENST00000355086 SLC24A1O60721 1099 aa8.19□□□□□ -1.1
SRGAP1-201ENST00000355086 BCL11AQ9H165 835 aa8.16□□□□□ -1.1
SRGAP1-201ENST00000355086 CANXP27824 592 aaKnown RBP8.11□□□□□ -1.11
SRGAP1-201ENST00000355086 TRIM52Q96A61 297 aa8.1□□□□□ -1.11
SRGAP1-201ENST00000355086 FAM50AQ14320 339 aaKnown RBP8.1□□□□□ -1.11
SRGAP1-201ENST00000355086 CDK11AQ9UQ88 783 aaPredicted RBP8.09□□□□□ -1.11
SRGAP1-201ENST00000355086 DIEXFQ68CQ4 756 aaKnown RBP8.08□□□□□ -1.12
SRGAP1-201ENST00000355086 NEFMP07197 916 aa8.07□□□□□ -1.12
SRGAP1-201ENST00000355086 BCANQ96GW7 911 aa8.07□□□□□ -1.12
SRGAP1-201ENST00000355086 NEUROD1Q13562 356 aa8.06□□□□□ -1.12
SRGAP1-201ENST00000355086 ANP32CO43423 234 aa8.05□□□□□ -1.12
SRGAP1-201ENST00000355086 ZNF326Q5BKZ1 582 aaKnown RBP8.04□□□□□ -1.12
SRGAP1-201ENST00000355086 ANP32BQ92688 251 aaKnown RBP8.02□□□□□ -1.13
SRGAP1-201ENST00000355086 LOC105371045A0A1W2PR82 267 aa8.02□□□□□ -1.13
SRGAP1-201ENST00000355086 ANP32AP39687 249 aaKnown RBP7.98□□□□□ -1.13
SRGAP1-201ENST00000355086 HSP90AA1P07900 732 aaKnown RBP7.97□□□□□ -1.13
SRGAP1-201ENST00000355086 EIF5BO60841 1220 aaKnown RBP7.96□□□□□ -1.14
SRGAP1-201ENST00000355086 NPM2Q86SE8 214 aaKnown RBP7.95□□□□□ -1.14
SRGAP1-201ENST00000355086 GTF3C3Q9Y5Q9 886 aa7.91□□□□□ -1.14
SRGAP1-201ENST00000355086 UPF2Q9HAU5 1272 aaKnown RBP7.91□□□□□ -1.14
SRGAP1-201ENST00000355086 FBLN2P98095 1184 aa7.91□□□□□ -1.14
SRGAP1-201ENST00000355086 CDK11BP21127 795 aaKnown RBP7.9□□□□□ -1.15
SRGAP1-201ENST00000355086 ESF1Q9H501 851 aaKnown RBP7.89□□□□□ -1.15
SRGAP1-201ENST00000355086 GLIPR1L2Q4G1C9 344 aa7.89□□□□□ -1.15
SRGAP1-201ENST00000355086 STAG3Q9UJ98 1225 aa7.87□□□□□ -1.15
SRGAP1-201ENST00000355086 PLPPR3Q6T4P5 718 aa7.86□□□□□ -1.15
SRGAP1-201ENST00000355086 CHGAP10645 457 aaKnown RBP7.82□□□□□ -1.16
SRGAP1-201ENST00000355086 ARXQ96QS3 562 aa7.82□□□□□ -1.16
SRGAP1-201ENST00000355086 A0A0G2JS52 829 aa7.8□□□□□ -1.16
SRGAP1-201ENST00000355086 ARID3CA6NKF2 412 aa7.8□□□□□ -1.16
SRGAP1-201ENST00000355086 SCAF1Q9H7N4 1312 aaKnown RBP7.79□□□□□ -1.16
SRGAP1-201ENST00000355086 ZNF777Q9ULD5 760 aaPredicted RBP7.79□□□□□ -1.16
SRGAP1-201ENST00000355086 GOLGA6L2Q8N9W4 650 aaPredicted RBP7.77□□□□□ -1.17
SRGAP1-201ENST00000355086 SALL2Q9Y467 1007 aaPredicted RBP7.76□□□□□ -1.17
SRGAP1-201ENST00000355086 NBR1Q14596 966 aa7.76□□□□□ -1.17
SRGAP1-201ENST00000355086 P3H3Q8IVL6 736 aa7.76□□□□□ -1.17
SRGAP1-201ENST00000355086 FKBP8Q14318 412 aa7.75□□□□□ -1.17
SRGAP1-201ENST00000355086 MYH16Q9H6N6 1097 aa7.74□□□□□ -1.17
SRGAP1-201ENST00000355086 PABPN1Q86U42 306 aaKnown RBP eCLIP7.73□□□□□ -1.17
SRGAP1-201ENST00000355086 FAM9BQ8IZU0 186 aa7.73□□□□□ -1.17
SRGAP1-201ENST00000355086 HNRNPUQ00839 825 aaKnown RBP eCLIP7.72□□□□□ -1.17
SRGAP1-201ENST00000355086 TULP1O00294 542 aaPredicted RBP7.72□□□□□ -1.17
SRGAP1-201ENST00000355086 WDR43Q15061 677 aaKnown RBP eCLIP7.72□□□□□ -1.17
SRGAP1-201ENST00000355086 CCDC136Q96JN2 1154 aa7.71□□□□□ -1.17
SRGAP1-201ENST00000355086 ACIN1Q9UKV3 1341 aaKnown RBP7.71□□□□□ -1.18
SRGAP1-201ENST00000355086 NCLP19338 710 aaKnown RBP7.71□□□□□ -1.18
SRGAP1-201ENST00000355086 TMC1Q8TDI8 760 aa7.71□□□□□ -1.18
SRGAP1-201ENST00000355086 TNNT2P45379 298 aaPredicted RBP7.7□□□□□ -1.18
SRGAP1-201ENST00000355086 TRIM44Q96DX7 344 aaPredicted RBP7.69□□□□□ -1.18
SRGAP1-201ENST00000355086 TONSLQ96HA7 1378 aa7.69□□□□□ -1.18
SRGAP1-201ENST00000355086 NPM1P06748 294 aaKnown RBP eCLIP7.68□□□□□ -1.18
SRGAP1-201ENST00000355086 ZBTB7CA1YPR0 619 aa7.68□□□□□ -1.18
SRGAP1-201ENST00000355086 PLEKHG5O94827 1062 aa7.68□□□□□ -1.18
SRGAP1-201ENST00000355086 C14orf37Q86TY3 774 aa7.67□□□□□ -1.18
SRGAP1-201ENST00000355086 ZRSR1Q15695 479 aaKnown RBP7.67□□□□□ -1.18
SRGAP1-201ENST00000355086 GRWD1Q9BQ67 446 aaKnown RBP eCLIP7.67□□□□□ -1.18
SRGAP1-201ENST00000355086 GOLGA6L22H0YM25 854 aa7.66□□□□□ -1.18
SRGAP1-201ENST00000355086 BECN1Q14457 450 aa7.66□□□□□ -1.18
SRGAP1-201ENST00000355086 PTMAP06454 111 aaKnown RBP7.65□□□□□ -1.18
SRGAP1-201ENST00000355086 DDX10Q13206 875 aaKnown RBP7.65□□□□□ -1.19
SRGAP1-201ENST00000355086 DDRGK1Q96HY6 314 aa7.63□□□□□ -1.19
SRGAP1-201ENST00000355086 ANP32EQ9BTT0 268 aa7.63□□□□□ -1.19
SRGAP1-201ENST00000355086 DNTTIP2Q5QJE6 756 aaKnown RBP7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms