RNA–Protein interactions for RNA: ENST00000556787.5

PAPOLA-222, Transcript of poly(A) polymerase alpha, humanhuman

TSL 2

Gene PAPOLA, Length 806 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAPOLA-222ENST00000556787 AEBP2Q6ZN18 517 aaPredicted RBP26.42■■□□□ 1.82
PAPOLA-222ENST00000556787 CHIC1Q5VXU3 224 aa25.33■■□□□ 1.65
PAPOLA-222ENST00000556787 SENP3Q9H4L4 574 aaPredicted RBP22.53■■□□□ 1.2
PAPOLA-222ENST00000556787 PHF23Q9BUL5 403 aaPredicted RBP22.23■■□□□ 1.15
PAPOLA-222ENST00000556787 FOXD1Q16676 465 aa21.01■□□□□ 0.95
PAPOLA-222ENST00000556787 PLPPR3Q6T4P5 718 aa20.71■□□□□ 0.91
PAPOLA-222ENST00000556787 MSH5O43196 834 aa19.68■□□□□ 0.74
PAPOLA-222ENST00000556787 PIAS4Q8N2W9 510 aaPredicted RBP19.61■□□□□ 0.73
PAPOLA-222ENST00000556787 PPP6R1Q9UPN7 881 aa19.61■□□□□ 0.73
PAPOLA-222ENST00000556787 ADRA2BP18089 450 aa19.59■□□□□ 0.73
PAPOLA-222ENST00000556787 POTEDQ86YR6 584 aa19.32■□□□□ 0.68
PAPOLA-222ENST00000556787 SCAF1Q9H7N4 1312 aaKnown RBP18.21■□□□□ 0.51
PAPOLA-222ENST00000556787 PPP4R3CPQ6ZMV5 832 aa18.19■□□□□ 0.5
PAPOLA-222ENST00000556787 MAPK8IP2Q13387 824 aaPredicted RBP17.96■□□□□ 0.47
PAPOLA-222ENST00000556787 NCBP3Q53F19 620 aaKnown RBP17.91■□□□□ 0.46
PAPOLA-222ENST00000556787 DMRT2Q9Y5R5 561 aa17.86■□□□□ 0.45
PAPOLA-222ENST00000556787 KCNA4P22459 653 aa17.74■□□□□ 0.43
PAPOLA-222ENST00000556787 CNKSR2Q8WXI2 1034 aa17.73■□□□□ 0.43
PAPOLA-222ENST00000556787 NPM3O75607 178 aaKnown RBP17.41■□□□□ 0.38
PAPOLA-222ENST00000556787 RNF216Q9NWF9 866 aaPredicted RBP17.34■□□□□ 0.37
PAPOLA-222ENST00000556787 HOXD11P31277 338 aaPredicted RBP17.19■□□□□ 0.34
PAPOLA-222ENST00000556787 DCAF8L1A6NGE4 600 aa17.11■□□□□ 0.33
PAPOLA-222ENST00000556787 SLC4A1APQ9BWU0 796 aaKnown RBP17.03■□□□□ 0.32
PAPOLA-222ENST00000556787 DNAJC5BQ9UF47 199 aa16.93■□□□□ 0.3
PAPOLA-222ENST00000556787 CACNB1Q02641 598 aaPredicted RBP16.92■□□□□ 0.3
PAPOLA-222ENST00000556787 RNF39Q9H2S5 420 aa16.8■□□□□ 0.28
PAPOLA-222ENST00000556787 EHMT2Q96KQ7 1210 aa16.55■□□□□ 0.24
PAPOLA-222ENST00000556787 C1QBPQ07021 282 aaKnown RBP16.54■□□□□ 0.24
PAPOLA-222ENST00000556787 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.53■□□□□ 0.249e-6■□□□□ 10.7
PAPOLA-222ENST00000556787 FOXD4L1Q9NU39 408 aa16.42■□□□□ 0.22
PAPOLA-222ENST00000556787 SLC4A2P04920 1241 aa16.36■□□□□ 0.21
PAPOLA-222ENST00000556787 CSRNP3Q8WYN3 585 aa16.26■□□□□ 0.19
PAPOLA-222ENST00000556787 ZBTB22O15209 634 aa16.21■□□□□ 0.19
PAPOLA-222ENST00000556787 MYCNP04198 464 aaPredicted RBP16.2■□□□□ 0.18
PAPOLA-222ENST00000556787 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.18■□□□□ 0.18
PAPOLA-222ENST00000556787 HNRNPUL2Q1KMD3 747 aaKnown RBP16.18■□□□□ 0.18
PAPOLA-222ENST00000556787 U3KPZ7 1027 aaPredicted RBP16.08■□□□□ 0.16
PAPOLA-222ENST00000556787 APLP2Q06481 763 aa16.07■□□□□ 0.16
PAPOLA-222ENST00000556787 SAMD1Q6SPF0 538 aaPredicted RBP16.06■□□□□ 0.16
PAPOLA-222ENST00000556787 ATXN8OSP0DMR3 200 aa15.91■□□□□ 0.14
PAPOLA-222ENST00000556787 SPINK5Q9NQ38 1064 aaPredicted RBP15.81■□□□□ 0.12
PAPOLA-222ENST00000556787 CAPN15O75808 1086 aa15.77■□□□□ 0.12
PAPOLA-222ENST00000556787 DSG3P32926 999 aa15.71■□□□□ 0.11
PAPOLA-222ENST00000556787 ZNF219Q9P2Y4 722 aaPredicted RBP15.69■□□□□ 0.1
PAPOLA-222ENST00000556787 TRHP20396 242 aaPredicted RBP15.62■□□□□ 0.09
PAPOLA-222ENST00000556787 ATF5Q9Y2D1 282 aaPredicted RBP15.55■□□□□ 0.08
PAPOLA-222ENST00000556787 ABCB7O75027 752 aa15.41■□□□□ 0.06
PAPOLA-222ENST00000556787 POLA2Q14181 598 aa15.36■□□□□ 0.05
PAPOLA-222ENST00000556787 ZBTB12Q9Y330 459 aaPredicted RBP15.27■□□□□ 0.04
PAPOLA-222ENST00000556787 FBLN2P98095 1184 aa15.22■□□□□ 0.03
PAPOLA-222ENST00000556787 POTEHQ6S545 545 aa15.13■□□□□ 0.01
PAPOLA-222ENST00000556787 RBM42Q9BTD8 480 aaKnown RBP14.97□□□□□ -0.01
PAPOLA-222ENST00000556787 MKRN4PQ13434 485 aaPredicted RBP14.9□□□□□ -0.02
PAPOLA-222ENST00000556787 FKBP8Q14318 412 aa14.8□□□□□ -0.04
PAPOLA-222ENST00000556787 SPDYE2BA6NHP3 402 aa14.77□□□□□ -0.05
PAPOLA-222ENST00000556787 SPDYE4A6NLX3 237 aa14.77□□□□□ -0.05
PAPOLA-222ENST00000556787 SPDYE6P0CI01 402 aa14.77□□□□□ -0.05
PAPOLA-222ENST00000556787 SPDYE2Q495Y8 402 aa14.77□□□□□ -0.05
PAPOLA-222ENST00000556787 OSCARQ8IYS5 282 aa14.77□□□□□ -0.05
PAPOLA-222ENST00000556787 ZNF692Q9BU19 519 aaPredicted RBP14.73□□□□□ -0.05
PAPOLA-222ENST00000556787 CHRDL2Q6WN34 429 aa14.68□□□□□ -0.06
PAPOLA-222ENST00000556787 AKT1S1Q96B36 256 aa14.62□□□□□ -0.07
PAPOLA-222ENST00000556787 SSUH2Q9Y2M2 353 aa14.54□□□□□ -0.08
PAPOLA-222ENST00000556787 REM2Q8IYK8 340 aaPredicted RBP14.49□□□□□ -0.09
PAPOLA-222ENST00000556787 PABPN1Q86U42 306 aaKnown RBP eCLIP14.47□□□□□ -0.09
PAPOLA-222ENST00000556787 FBXO3Q9UK99 471 aa14.44□□□□□ -0.1
PAPOLA-222ENST00000556787 STAG3Q9UJ98 1225 aa14.41□□□□□ -0.1
PAPOLA-222ENST00000556787 PROM2Q8N271 834 aa14.4□□□□□ -0.1
PAPOLA-222ENST00000556787 SPDYE1Q8NFV5 336 aaPredicted RBP14.35□□□□□ -0.11
PAPOLA-222ENST00000556787 PITPNM1O00562 1244 aa14.34□□□□□ -0.11
PAPOLA-222ENST00000556787 PIP4P2Q8N4L2 257 aa14.32□□□□□ -0.12
PAPOLA-222ENST00000556787 CLEC11AQ9Y240 323 aa14.26□□□□□ -0.13
PAPOLA-222ENST00000556787 FXR2P51116 673 aaKnown RBP eCLIP14.23□□□□□ -0.13
PAPOLA-222ENST00000556787 PLEKHG5O94827 1062 aa14.18□□□□□ -0.14
PAPOLA-222ENST00000556787 PRR29P0C7W0 189 aa14.17□□□□□ -0.14
PAPOLA-222ENST00000556787 SP7Q8TDD2 431 aaPredicted RBP14.15□□□□□ -0.14
PAPOLA-222ENST00000556787 PLCD3Q8N3E9 789 aa14.09□□□□□ -0.15
PAPOLA-222ENST00000556787 MIER1Q8N108 512 aa14.08□□□□□ -0.16
PAPOLA-222ENST00000556787 VASPP50552 380 aaPredicted RBP14.07□□□□□ -0.16
PAPOLA-222ENST00000556787 HAX1O00165 279 aa14.06□□□□□ -0.16
PAPOLA-222ENST00000556787 ZBTB47Q9UFB7 747 aaPredicted RBP14.01□□□□□ -0.17
PAPOLA-222ENST00000556787 KLHL34Q8N239 644 aa13.97□□□□□ -0.17
PAPOLA-222ENST00000556787 PRKAR2AP13861 404 aaKnown RBP13.96□□□□□ -0.17
PAPOLA-222ENST00000556787 EVX2Q03828 476 aa13.91□□□□□ -0.18
PAPOLA-222ENST00000556787 NPM1P06748 294 aaKnown RBP eCLIP13.84□□□□□ -0.19
PAPOLA-222ENST00000556787 CREBZFQ9NS37 354 aa13.84□□□□□ -0.19
PAPOLA-222ENST00000556787 IFNLR1Q8IU57 520 aaPredicted RBP13.81□□□□□ -0.2
PAPOLA-222ENST00000556787 CHADLQ6NUI6 762 aa13.79□□□□□ -0.2
PAPOLA-222ENST00000556787 SPOCK2Q92563 424 aa13.78□□□□□ -0.2
PAPOLA-222ENST00000556787 C19orf67A6NJJ6 358 aa13.77□□□□□ -0.21
PAPOLA-222ENST00000556787 FARP1Q9Y4F1 1045 aaPredicted RBP13.72□□□□□ -0.21
PAPOLA-222ENST00000556787 AMER1Q5JTC6 1135 aaPredicted RBP13.68□□□□□ -0.22
PAPOLA-222ENST00000556787 PAK3O75914 559 aaPredicted RBP13.63□□□□□ -0.23
PAPOLA-222ENST00000556787 MNX1P50219 401 aaPredicted RBP13.63□□□□□ -0.23
PAPOLA-222ENST00000556787 FAM212AQ96EL1 285 aa13.61□□□□□ -0.23
PAPOLA-222ENST00000556787 GSE1Q14687 1217 aa13.6□□□□□ -0.23
PAPOLA-222ENST00000556787 GABBR2O75899 941 aa13.58□□□□□ -0.24
PAPOLA-222ENST00000556787 DCAF8Q5TAQ9 597 aa13.58□□□□□ -0.24
PAPOLA-222ENST00000556787 CIZ1Q9ULV3 898 aaPredicted RBP13.58□□□□□ -0.24
PAPOLA-222ENST00000556787 NUBP1P53384 320 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms