RNA–Protein interactions for RNA: ENST00000631006.2

SRGAP1-207, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SRGAP1, Length 8,406 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-207ENST00000631006 DCAF8L2P0C7V8 631 aa11.22□□□□□ -0.61
SRGAP1-207ENST00000631006 FAM9AQ8IZU1 332 aaPredicted RBP10.35□□□□□ -0.75
SRGAP1-207ENST00000631006 SUPT5HO00267 1087 aaKnown RBP10.28□□□□□ -0.76
SRGAP1-207ENST00000631006 EHMT2Q96KQ7 1210 aa10.26□□□□□ -0.77
SRGAP1-207ENST00000631006 PELP1Q8IZL8 1130 aaKnown RBP10.25□□□□□ -0.77
SRGAP1-207ENST00000631006 APLP2Q06481 763 aa10.2□□□□□ -0.78
SRGAP1-207ENST00000631006 SHROOM4Q9ULL8 1493 aa10.03□□□□□ -0.8
SRGAP1-207ENST00000631006 ATP1B4Q9UN42 357 aaPredicted RBP9.92□□□□□ -0.82
SRGAP1-207ENST00000631006 TTBK1Q5TCY1 1321 aaPredicted RBP9.89□□□□□ -0.83
SRGAP1-207ENST00000631006 ERICH6Q7L0X2 663 aa9.89□□□□□ -0.83
SRGAP1-207ENST00000631006 RANGAP1P46060 587 aaPredicted RBP9.88□□□□□ -0.83
SRGAP1-207ENST00000631006 CCER1Q8TC90 406 aaPredicted RBP9.82□□□□□ -0.84
SRGAP1-207ENST00000631006 NISCHQ9Y2I1 1504 aa9.82□□□□□ -0.84
SRGAP1-207ENST00000631006 MYT1LQ9UL68 1186 aa9.79□□□□□ -0.84
SRGAP1-207ENST00000631006 PCGF6Q9BYE7 350 aa9.64□□□□□ -0.87
SRGAP1-207ENST00000631006 CHIC1Q5VXU3 224 aa9.6□□□□□ -0.87
SRGAP1-207ENST00000631006 NEFLP07196 543 aa9.59□□□□□ -0.87
SRGAP1-207ENST00000631006 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.59□□□□□ -0.87
SRGAP1-207ENST00000631006 HNRNPUL2Q1KMD3 747 aaKnown RBP9.59□□□□□ -0.87
SRGAP1-207ENST00000631006 UBTFP17480 764 aaKnown RBP9.58□□□□□ -0.88
SRGAP1-207ENST00000631006 CENPBP07199 599 aaPredicted RBP9.56□□□□□ -0.88
SRGAP1-207ENST00000631006 TRIM41Q8WV44 630 aa9.52□□□□□ -0.89
SRGAP1-207ENST00000631006 SLC4A1APQ9BWU0 796 aaKnown RBP9.51□□□□□ -0.89
SRGAP1-207ENST00000631006 POLR3GLQ9BT43 218 aa9.51□□□□□ -0.89
SRGAP1-207ENST00000631006 DAXXQ9UER7 740 aaPredicted RBP9.51□□□□□ -0.89
SRGAP1-207ENST00000631006 MYT1Q01538 1121 aa9.47□□□□□ -0.89
SRGAP1-207ENST00000631006 ZEB1P37275 1124 aaPredicted RBP9.42□□□□□ -0.9
SRGAP1-207ENST00000631006 YTHDC1Q96MU7 727 aaKnown RBP9.4□□□□□ -0.9
SRGAP1-207ENST00000631006 CNGB1Q14028 1251 aaPredicted RBP9.36□□□□□ -0.91
SRGAP1-207ENST00000631006 ITGAEP38570 1179 aa9.35□□□□□ -0.91
SRGAP1-207ENST00000631006 CLSPNQ9HAW4 1339 aa9.27□□□□□ -0.92
SRGAP1-207ENST00000631006 SLC24A1O60721 1099 aa9.27□□□□□ -0.93
SRGAP1-207ENST00000631006 BCANQ96GW7 911 aa9.25□□□□□ -0.93
SRGAP1-207ENST00000631006 PPARGC1BQ86YN6 1023 aaKnown RBP9.25□□□□□ -0.93
SRGAP1-207ENST00000631006 ZNF316A6NFI3 1004 aaPredicted RBP9.25□□□□□ -0.93
SRGAP1-207ENST00000631006 ZBTB47Q9UFB7 747 aaPredicted RBP9.21□□□□□ -0.93
SRGAP1-207ENST00000631006 TRIM52Q96A61 297 aa9.13□□□□□ -0.95
SRGAP1-207ENST00000631006 FBLN2P98095 1184 aa9.13□□□□□ -0.95
SRGAP1-207ENST00000631006 BCL11AQ9H165 835 aa9.11□□□□□ -0.95
SRGAP1-207ENST00000631006 ESF1Q9H501 851 aaKnown RBP9.1□□□□□ -0.95
SRGAP1-207ENST00000631006 NEFMP07197 916 aa9.1□□□□□ -0.95
SRGAP1-207ENST00000631006 FAM50AQ14320 339 aaKnown RBP9.09□□□□□ -0.95
SRGAP1-207ENST00000631006 PLPPR3Q6T4P5 718 aa9.09□□□□□ -0.95
SRGAP1-207ENST00000631006 RTL5Q5HYW3 569 aaPredicted RBP9.08□□□□□ -0.96
SRGAP1-207ENST00000631006 ZNF326Q5BKZ1 582 aaKnown RBP9.05□□□□□ -0.96
SRGAP1-207ENST00000631006 CANXP27824 592 aaKnown RBP9.05□□□□□ -0.96
SRGAP1-207ENST00000631006 STAG3Q9UJ98 1225 aa8.99□□□□□ -0.97
SRGAP1-207ENST00000631006 TRIM26Q12899 539 aaPredicted RBP8.98□□□□□ -0.97
SRGAP1-207ENST00000631006 NEUROD1Q13562 356 aa8.96□□□□□ -0.97
SRGAP1-207ENST00000631006 SCAF1Q9H7N4 1312 aaKnown RBP8.94□□□□□ -0.98
SRGAP1-207ENST00000631006 A0A0G2JS52 829 aa8.94□□□□□ -0.98
SRGAP1-207ENST00000631006 PABPN1Q86U42 306 aaKnown RBP eCLIP8.93□□□□□ -0.98
SRGAP1-207ENST00000631006 NPM1P06748 294 aaKnown RBP eCLIP8.91□□□□□ -0.98
SRGAP1-207ENST00000631006 CHGAP10645 457 aaKnown RBP8.9□□□□□ -0.99
SRGAP1-207ENST00000631006 ARID3CA6NKF2 412 aa8.89□□□□□ -0.99
SRGAP1-207ENST00000631006 ZNF777Q9ULD5 760 aaPredicted RBP8.88□□□□□ -0.99
SRGAP1-207ENST00000631006 ANP32CO43423 234 aa8.85□□□□□ -0.99
SRGAP1-207ENST00000631006 CDK11BP21127 795 aaKnown RBP8.85□□□□□ -0.99
SRGAP1-207ENST00000631006 CDK11AQ9UQ88 783 aaPredicted RBP8.85□□□□□ -0.99
SRGAP1-207ENST00000631006 NPM2Q86SE8 214 aaKnown RBP8.83□□□□□ -1
SRGAP1-207ENST00000631006 HRCP23327 699 aa8.83□□□□□ -1
SRGAP1-207ENST00000631006 ABCC9O60706 1549 aa8.82□□□□□ -1
SRGAP1-207ENST00000631006 ZBTB7CA1YPR0 619 aa8.8□□□□□ -1
SRGAP1-207ENST00000631006 HSP90AA1P07900 732 aaKnown RBP8.79□□□□□ -1
SRGAP1-207ENST00000631006 LOC105371045A0A1W2PR82 267 aa8.78□□□□□ -1
SRGAP1-207ENST00000631006 ANP32BQ92688 251 aaKnown RBP8.78□□□□□ -1
SRGAP1-207ENST00000631006 P3H3Q8IVL6 736 aa8.78□□□□□ -1
SRGAP1-207ENST00000631006 HAP1P54257 671 aaPredicted RBP8.77□□□□□ -1
SRGAP1-207ENST00000631006 PLEKHG5O94827 1062 aa8.77□□□□□ -1.01
SRGAP1-207ENST00000631006 C14orf37Q86TY3 774 aa8.77□□□□□ -1.01
SRGAP1-207ENST00000631006 DIEXFQ68CQ4 756 aaKnown RBP8.75□□□□□ -1.01
SRGAP1-207ENST00000631006 UPF2Q9HAU5 1272 aaKnown RBP8.7□□□□□ -1.02
SRGAP1-207ENST00000631006 ANP32AP39687 249 aaKnown RBP8.69□□□□□ -1.02
SRGAP1-207ENST00000631006 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.69□□□□□ -1.02
SRGAP1-207ENST00000631006 TULP1O00294 542 aaPredicted RBP8.69□□□□□ -1.02
SRGAP1-207ENST00000631006 PPP1R15AO75807 674 aaPredicted RBP8.69□□□□□ -1.02
SRGAP1-207ENST00000631006 ARXQ96QS3 562 aa8.69□□□□□ -1.02
SRGAP1-207ENST00000631006 ARID4BQ4LE39 1312 aaPredicted RBP8.68□□□□□ -1.02
SRGAP1-207ENST00000631006 NPHP1O15259 732 aa8.68□□□□□ -1.02
SRGAP1-207ENST00000631006 MYH16Q9H6N6 1097 aa8.65□□□□□ -1.03
SRGAP1-207ENST00000631006 SENP3Q9H4L4 574 aaPredicted RBP8.64□□□□□ -1.03
SRGAP1-207ENST00000631006 WDR43Q15061 677 aaKnown RBP eCLIP8.61□□□□□ -1.03
SRGAP1-207ENST00000631006 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.6□□□□□ -1.03
SRGAP1-207ENST00000631006 SALL2Q9Y467 1007 aaPredicted RBP8.59□□□□□ -1.03
SRGAP1-207ENST00000631006 TONSLQ96HA7 1378 aa8.57□□□□□ -1.04
SRGAP1-207ENST00000631006 NCBP3Q53F19 620 aaKnown RBP8.57□□□□□ -1.04
SRGAP1-207ENST00000631006 CHMP7Q8WUX9 453 aaPredicted RBP8.57□□□□□ -1.04
SRGAP1-207ENST00000631006 LMOD2Q6P5Q4 547 aa8.56□□□□□ -1.04
SRGAP1-207ENST00000631006 TSPY4P0CV99 314 aa8.55□□□□□ -1.04
SRGAP1-207ENST00000631006 TSPY10P0CW01 314 aa8.55□□□□□ -1.04
SRGAP1-207ENST00000631006 TRHP20396 242 aaPredicted RBP8.55□□□□□ -1.04
SRGAP1-207ENST00000631006 KDM2AQ9Y2K7 1162 aa8.55□□□□□ -1.04
SRGAP1-207ENST00000631006 CCDC180Q9P1Z9 1646 aa8.54□□□□□ -1.04
SRGAP1-207ENST00000631006 NCLP19338 710 aaKnown RBP8.53□□□□□ -1.04
SRGAP1-207ENST00000631006 ZRSR1Q15695 479 aaKnown RBP8.53□□□□□ -1.04
SRGAP1-207ENST00000631006 FAM9BQ8IZU0 186 aa8.53□□□□□ -1.04
SRGAP1-207ENST00000631006 KCNH8Q96L42 1107 aa8.53□□□□□ -1.04
SRGAP1-207ENST00000631006 CHIC2Q9UKJ5 165 aa8.52□□□□□ -1.04
SRGAP1-207ENST00000631006 TMC1Q8TDI8 760 aa8.52□□□□□ -1.05
SRGAP1-207ENST00000631006 CLSTN1O94985 981 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms