RNA–Protein interactions for RNA: ENST00000535277.5

MRPL48-207, Transcript of mitochondrial ribosomal protein L48, humanhuman

TSL 3

Gene MRPL48, Length 598 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL48-207ENST00000535277 NISCHQ9Y2I1 1504 aa18.49■□□□□ 0.55
MRPL48-207ENST00000535277 ABCC9O60706 1549 aa16.83■□□□□ 0.28
MRPL48-207ENST00000535277 CCDC180Q9P1Z9 1646 aa16.79■□□□□ 0.28
MRPL48-207ENST00000535277 RB1CC1Q8TDY2 1594 aa15.96■□□□□ 0.15
MRPL48-207ENST00000535277 DNAJC5BQ9UF47 199 aa15.89■□□□□ 0.13
MRPL48-207ENST00000535277 UNC13AQ9UPW8 1703 aa15.86■□□□□ 0.13
MRPL48-207ENST00000535277 NACADO15069 1562 aa15.79■□□□□ 0.12
MRPL48-207ENST00000535277 BICRAQ9NZM4 1560 aa15.6■□□□□ 0.09
MRPL48-207ENST00000535277 PABPN1Q86U42 306 aaKnown RBP eCLIP15.55■□□□□ 0.08
MRPL48-207ENST00000535277 MYO15BQ96JP2 1530 aa15.51■□□□□ 0.07
MRPL48-207ENST00000535277 DCAF8L2P0C7V8 631 aa15.48■□□□□ 0.07
MRPL48-207ENST00000535277 ZCCHC6Q5VYS8 1495 aaKnown RBP15.33■□□□□ 0.05
MRPL48-207ENST00000535277 CC2D2AQ9P2K1 1620 aa15.27■□□□□ 0.03
MRPL48-207ENST00000535277 DCAF1Q9Y4B6 1507 aa15.27■□□□□ 0.03
MRPL48-207ENST00000535277 SCRIBQ14160 1630 aa15.26■□□□□ 0.03
MRPL48-207ENST00000535277 SHROOM4Q9ULL8 1493 aa15.25■□□□□ 0.03
MRPL48-207ENST00000535277 EIF4G1Q04637 1599 aaKnown RBP15.18■□□□□ 0.02
MRPL48-207ENST00000535277 CECR2Q9BXF3 1484 aa15.15■□□□□ 0.02
MRPL48-207ENST00000535277 DNAJC5Q9H3Z4 198 aa14.63□□□□□ -0.07
MRPL48-207ENST00000535277 CUX2O14529 1486 aa14.56□□□□□ -0.08
MRPL48-207ENST00000535277 SMARCA4P51532 1647 aa14.54□□□□□ -0.08
MRPL48-207ENST00000535277 NCAPD3P42695 1498 aa14.53□□□□□ -0.08
MRPL48-207ENST00000535277 ATAD2BQ9ULI0 1458 aa14.5□□□□□ -0.09
MRPL48-207ENST00000535277 HMGXB3Q12766 1538 aa14.5□□□□□ -0.09
MRPL48-207ENST00000535277 ERCC6Q03468 1493 aa14.49□□□□□ -0.09
MRPL48-207ENST00000535277 SMARCA2P51531 1590 aa14.46□□□□□ -0.09
MRPL48-207ENST00000535277 NESP48681 1621 aa14.45□□□□□ -0.1
MRPL48-207ENST00000535277 THOC2Q8NI27 1593 aaKnown RBP14.43□□□□□ -0.1
MRPL48-207ENST00000535277 KIF21AQ7Z4S6 1674 aa14.39□□□□□ -0.11
MRPL48-207ENST00000535277 PEG3Q9GZU2 1588 aa14.38□□□□□ -0.11
MRPL48-207ENST00000535277 BAZ1AQ9NRL2 1556 aaPredicted RBP14.37□□□□□ -0.11
MRPL48-207ENST00000535277 BAZ1BQ9UIG0 1483 aaKnown RBP14.34□□□□□ -0.11
MRPL48-207ENST00000535277 LAMC3Q9Y6N6 1575 aa14.31□□□□□ -0.12
MRPL48-207ENST00000535277 MROH2BQ7Z745 1585 aa14.29□□□□□ -0.12
MRPL48-207ENST00000535277 WIZO95785 1651 aa14.18□□□□□ -0.14
MRPL48-207ENST00000535277 WDR62O43379 1518 aa14.11□□□□□ -0.15
MRPL48-207ENST00000535277 PDS5BQ9NTI5 1447 aa14.11□□□□□ -0.15
MRPL48-207ENST00000535277 MRC2Q9UBG0 1479 aa14.09□□□□□ -0.15
MRPL48-207ENST00000535277 CADPSQ9ULU8 1353 aa14.05□□□□□ -0.16
MRPL48-207ENST00000535277 PRDM2Q13029 1718 aa14.02□□□□□ -0.16
MRPL48-207ENST00000535277 CEP164Q9UPV0 1460 aa13.99□□□□□ -0.17
MRPL48-207ENST00000535277 FANCD2Q9BXW9 1451 aa13.95□□□□□ -0.18
MRPL48-207ENST00000535277 TRIM41Q8WV44 630 aa13.93□□□□□ -0.18
MRPL48-207ENST00000535277 TOP2AP11388 1531 aaKnown RBP13.92□□□□□ -0.18
MRPL48-207ENST00000535277 CFTRP13569 1480 aa13.91□□□□□ -0.18
MRPL48-207ENST00000535277 URB2Q14146 1524 aaKnown RBP13.9□□□□□ -0.18
MRPL48-207ENST00000535277 RSF1Q96T23 1441 aaPredicted RBP13.85□□□□□ -0.19
MRPL48-207ENST00000535277 RIMBP3CA6NJZ7 1639 aa13.81□□□□□ -0.2
MRPL48-207ENST00000535277 RIMBP3BA6NNM3 1639 aa13.81□□□□□ -0.2
MRPL48-207ENST00000535277 RIMBP3Q9UFD9 1639 aa13.81□□□□□ -0.2
MRPL48-207ENST00000535277 ZNF608Q9ULD9 1512 aaPredicted RBP13.75□□□□□ -0.21
MRPL48-207ENST00000535277 EIF4G3O43432 1585 aaKnown RBP13.75□□□□□ -0.21
MRPL48-207ENST00000535277 CHD1O14646 1710 aa13.74□□□□□ -0.21
MRPL48-207ENST00000535277 OSCARQ8IYS5 282 aa13.71□□□□□ -0.21
MRPL48-207ENST00000535277 CCDC88BA6NC98 1476 aa13.71□□□□□ -0.21
MRPL48-207ENST00000535277 TOPBP1Q92547 1522 aa13.7□□□□□ -0.22
MRPL48-207ENST00000535277 ARHGEF11O15085 1522 aa13.69□□□□□ -0.22
MRPL48-207ENST00000535277 IFT140Q96RY7 1462 aa13.68□□□□□ -0.22
MRPL48-207ENST00000535277 TARBP1Q13395 1621 aaKnown RBP13.68□□□□□ -0.22
MRPL48-207ENST00000535277 DNMBPQ6XZF7 1577 aa13.66□□□□□ -0.22
MRPL48-207ENST00000535277 ABCC8Q09428 1581 aa13.57□□□□□ -0.24
MRPL48-207ENST00000535277 POLA1P09884 1462 aaPredicted RBP13.55□□□□□ -0.24
MRPL48-207ENST00000535277 ARAP1Q96P48 1450 aa13.55□□□□□ -0.24
MRPL48-207ENST00000535277 AQRO60306 1485 aaKnown RBP eCLIP13.55□□□□□ -0.24
MRPL48-207ENST00000535277 WDR97A6NE52 1622 aa13.53□□□□□ -0.24
MRPL48-207ENST00000535277 RAD54L2Q9Y4B4 1467 aa13.49□□□□□ -0.25
MRPL48-207ENST00000535277 CLASP1Q7Z460 1538 aa13.49□□□□□ -0.25
MRPL48-207ENST00000535277 PBRM1Q86U86 1689 aa13.48□□□□□ -0.25
MRPL48-207ENST00000535277 SNAPC4Q5SXM2 1469 aa13.45□□□□□ -0.26
MRPL48-207ENST00000535277 CUX1P39880 1505 aa13.44□□□□□ -0.26
MRPL48-207ENST00000535277 FGD5Q6ZNL6 1462 aa13.44□□□□□ -0.26
MRPL48-207ENST00000535277 CYB5RLQ6IPT4 315 aa13.43□□□□□ -0.26
MRPL48-207ENST00000535277 TDRD9Q8NDG6 1382 aaKnown RBP13.4□□□□□ -0.26
MRPL48-207ENST00000535277 SYNJ1O43426 1573 aa13.4□□□□□ -0.26
MRPL48-207ENST00000535277 SOGA1O94964 1423 aa13.39□□□□□ -0.27
MRPL48-207ENST00000535277 MAGI1Q96QZ7 1491 aaPredicted RBP13.37□□□□□ -0.27
MRPL48-207ENST00000535277 FBLN2P98095 1184 aa13.37□□□□□ -0.27
MRPL48-207ENST00000535277 ABCA5Q8WWZ7 1642 aa13.37□□□□□ -0.27
MRPL48-207ENST00000535277 SYNJ2O15056 1496 aa13.33□□□□□ -0.28
MRPL48-207ENST00000535277 GRIN2BQ13224 1484 aa13.33□□□□□ -0.28
MRPL48-207ENST00000535277 TRHP20396 242 aaPredicted RBP13.3□□□□□ -0.28
MRPL48-207ENST00000535277 ERCC6L2Q5T890 1561 aa13.29□□□□□ -0.28
MRPL48-207ENST00000535277 GAPVD1Q14C86 1478 aa13.27□□□□□ -0.29
MRPL48-207ENST00000535277 ADAMTS12P58397 1594 aa13.27□□□□□ -0.29
MRPL48-207ENST00000535277 ABCA10Q8WWZ4 1543 aa13.26□□□□□ -0.29
MRPL48-207ENST00000535277 BIVM-ERCC5R4GMW8 1640 aa13.24□□□□□ -0.29
MRPL48-207ENST00000535277 CEP170Q5SW79 1584 aa13.24□□□□□ -0.29
MRPL48-207ENST00000535277 CHMP7Q8WUX9 453 aaPredicted RBP13.24□□□□□ -0.29
MRPL48-207ENST00000535277 SHROOM2Q13796 1616 aa13.23□□□□□ -0.29
MRPL48-207ENST00000535277 KIF13AQ9H1H9 1805 aa13.23□□□□□ -0.29
MRPL48-207ENST00000535277 GRIN2AQ12879 1464 aa13.2□□□□□ -0.3
MRPL48-207ENST00000535277 TOP2BQ02880 1626 aa13.19□□□□□ -0.3
MRPL48-207ENST00000535277 NUP160Q12769 1436 aa13.16□□□□□ -0.3
MRPL48-207ENST00000535277 ERICH3Q5RHP9 1530 aa13.1□□□□□ -0.31
MRPL48-207ENST00000535277 RUSC2Q8N2Y8 1516 aa13.1□□□□□ -0.31
MRPL48-207ENST00000535277 WRNQ14191 1432 aaPredicted RBP eCLIP13.09□□□□□ -0.31
MRPL48-207ENST00000535277 FHAD1B1AJZ9 1412 aa13.07□□□□□ -0.32
MRPL48-207ENST00000535277 ADCY10Q96PN6 1610 aa13.02□□□□□ -0.32
MRPL48-207ENST00000535277 AEBP2Q6ZN18 517 aaPredicted RBP13.01□□□□□ -0.33
MRPL48-207ENST00000535277 DIP2BQ9P265 1576 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 89.5 ms