RNA–Protein interactions for RNA: ENST00000482955.5

PDS5B-207, Transcript of PDS5 cohesin associated factor B, humanhuman

TSL 3

Gene PDS5B, Length 581 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5B-207ENST00000482955 NISCHQ9Y2I1 1504 aa52.31■■■■■ 5.96
PDS5B-207ENST00000482955 CCDC180Q9P1Z9 1646 aa46.87■■■■■ 5.09
PDS5B-207ENST00000482955 ABCC9O60706 1549 aa46.69■■■■■ 5.07
PDS5B-207ENST00000482955 RB1CC1Q8TDY2 1594 aa44.55■■■■■ 4.72
PDS5B-207ENST00000482955 NACADO15069 1562 aa44.3■■■■■ 4.68
PDS5B-207ENST00000482955 DCAF8L2P0C7V8 631 aa44.08■■■■■ 4.65
PDS5B-207ENST00000482955 MYO15BQ96JP2 1530 aa43.77■■■■■ 4.6
PDS5B-207ENST00000482955 DNAJC5BQ9UF47 199 aa43.73■■■■■ 4.59
PDS5B-207ENST00000482955 UNC13AQ9UPW8 1703 aa43.53■■■■■ 4.56
PDS5B-207ENST00000482955 PABPN1Q86U42 306 aaKnown RBP eCLIP43.52■■■■■ 4.56
PDS5B-207ENST00000482955 ZCCHC6Q5VYS8 1495 aaKnown RBP43.36■■■■■ 4.53
PDS5B-207ENST00000482955 DCAF1Q9Y4B6 1507 aa43.25■■■■■ 4.51
PDS5B-207ENST00000482955 BICRAQ9NZM4 1560 aa43.24■■■■■ 4.51
PDS5B-207ENST00000482955 SHROOM4Q9ULL8 1493 aa42.7■■■■■ 4.43
PDS5B-207ENST00000482955 SCRIBQ14160 1630 aa42.66■■■■■ 4.42
PDS5B-207ENST00000482955 CC2D2AQ9P2K1 1620 aa42.21■■■■■ 4.35
PDS5B-207ENST00000482955 EIF4G1Q04637 1599 aaKnown RBP42.15■■■■■ 4.34
PDS5B-207ENST00000482955 CECR2Q9BXF3 1484 aa42.06■■■■■ 4.32
PDS5B-207ENST00000482955 NCAPD3P42695 1498 aa40.9■■■■■ 4.14
PDS5B-207ENST00000482955 ATAD2BQ9ULI0 1458 aa40.77■■■■■ 4.12
PDS5B-207ENST00000482955 SMARCA4P51532 1647 aa40.75■■■■■ 4.11
PDS5B-207ENST00000482955 SMARCA2P51531 1590 aa40.67■■■■■ 4.1
PDS5B-207ENST00000482955 BAZ1AQ9NRL2 1556 aaPredicted RBP40.59■■■■■ 4.09
PDS5B-207ENST00000482955 HMGXB3Q12766 1538 aa40.58■■■■■ 4.09
PDS5B-207ENST00000482955 PEG3Q9GZU2 1588 aa40.39■■■■■ 4.06
PDS5B-207ENST00000482955 BAZ1BQ9UIG0 1483 aaKnown RBP40.37■■■■■ 4.05
PDS5B-207ENST00000482955 ERCC6Q03468 1493 aa40.31■■■■■ 4.04
PDS5B-207ENST00000482955 MROH2BQ7Z745 1585 aa40.29■■■■■ 4.04
PDS5B-207ENST00000482955 CUX2O14529 1486 aa40.22■■■■■ 4.03
PDS5B-207ENST00000482955 NESP48681 1621 aa40.16■■■■■ 4.02
PDS5B-207ENST00000482955 DNAJC5Q9H3Z4 198 aa40.08■■■■■ 4.01
PDS5B-207ENST00000482955 LAMC3Q9Y6N6 1575 aa39.94■■■■□ 3.98
PDS5B-207ENST00000482955 WIZO95785 1651 aa39.81■■■■□ 3.96
PDS5B-207ENST00000482955 PDS5BQ9NTI5 1447 aa39.72■■■■□ 3.95
PDS5B-207ENST00000482955 THOC2Q8NI27 1593 aaKnown RBP39.72■■■■□ 3.95
PDS5B-207ENST00000482955 CADPSQ9ULU8 1353 aa39.67■■■■□ 3.94
PDS5B-207ENST00000482955 KIF21AQ7Z4S6 1674 aa39.64■■■■□ 3.94
PDS5B-207ENST00000482955 RSF1Q96T23 1441 aaPredicted RBP39.53■■■■□ 3.92
PDS5B-207ENST00000482955 MRC2Q9UBG0 1479 aa39.33■■■■□ 3.89
PDS5B-207ENST00000482955 TOP2AP11388 1531 aaKnown RBP39.31■■■■□ 3.88
PDS5B-207ENST00000482955 CFTRP13569 1480 aa39.24■■■■□ 3.87
PDS5B-207ENST00000482955 WDR62O43379 1518 aa39.23■■■■□ 3.87
PDS5B-207ENST00000482955 CEP164Q9UPV0 1460 aa39.2■■■■□ 3.87
PDS5B-207ENST00000482955 FANCD2Q9BXW9 1451 aa39.18■■■■□ 3.86
PDS5B-207ENST00000482955 CCDC88BA6NC98 1476 aa38.9■■■■□ 3.82
PDS5B-207ENST00000482955 URB2Q14146 1524 aaKnown RBP38.84■■■■□ 3.81
PDS5B-207ENST00000482955 PRDM2Q13029 1718 aa38.83■■■■□ 3.81
PDS5B-207ENST00000482955 TOPBP1Q92547 1522 aa38.46■■■■□ 3.75
PDS5B-207ENST00000482955 OSCARQ8IYS5 282 aa38.45■■■■□ 3.75
PDS5B-207ENST00000482955 ABCC8Q09428 1581 aa38.44■■■■□ 3.74
PDS5B-207ENST00000482955 IFT140Q96RY7 1462 aa38.43■■■■□ 3.74
PDS5B-207ENST00000482955 ZNF608Q9ULD9 1512 aaPredicted RBP38.33■■■■□ 3.73
PDS5B-207ENST00000482955 DNMBPQ6XZF7 1577 aa38.32■■■■□ 3.73
PDS5B-207ENST00000482955 TRIM41Q8WV44 630 aa38.3■■■■□ 3.72
PDS5B-207ENST00000482955 EIF4G3O43432 1585 aaKnown RBP38.11■■■■□ 3.69
PDS5B-207ENST00000482955 TARBP1Q13395 1621 aaKnown RBP38.11■■■■□ 3.69
PDS5B-207ENST00000482955 POLA1P09884 1462 aaPredicted RBP38.07■■■■□ 3.68
PDS5B-207ENST00000482955 AQRO60306 1485 aaKnown RBP eCLIP38.03■■■■□ 3.68
PDS5B-207ENST00000482955 SOGA1O94964 1423 aa37.93■■■■□ 3.66
PDS5B-207ENST00000482955 RAD54L2Q9Y4B4 1467 aa37.92■■■■□ 3.66
PDS5B-207ENST00000482955 RIMBP3CA6NJZ7 1639 aa37.87■■■■□ 3.65
PDS5B-207ENST00000482955 RIMBP3BA6NNM3 1639 aa37.87■■■■□ 3.65
PDS5B-207ENST00000482955 RIMBP3Q9UFD9 1639 aa37.87■■■■□ 3.65
PDS5B-207ENST00000482955 SUPT5HO00267 1087 aaKnown RBP37.86■■■■□ 3.65
PDS5B-207ENST00000482955 FGD5Q6ZNL6 1462 aa37.84■■■■□ 3.65
PDS5B-207ENST00000482955 CUX1P39880 1505 aa37.84■■■■□ 3.65
PDS5B-207ENST00000482955 TDRD9Q8NDG6 1382 aaKnown RBP37.81■■■■□ 3.64
PDS5B-207ENST00000482955 CHD1O14646 1710 aa37.81■■■■□ 3.64
PDS5B-207ENST00000482955 ARHGEF11O15085 1522 aa37.77■■■■□ 3.64
PDS5B-207ENST00000482955 WDR97A6NE52 1622 aa37.76■■■■□ 3.63
PDS5B-207ENST00000482955 FBLN2P98095 1184 aa37.74■■■■□ 3.63
PDS5B-207ENST00000482955 SNAPC4Q5SXM2 1469 aa37.62■■■■□ 3.61
PDS5B-207ENST00000482955 GRIN2BQ13224 1484 aa37.57■■■■□ 3.6
PDS5B-207ENST00000482955 MAGI1Q96QZ7 1491 aaPredicted RBP37.56■■■■□ 3.6
PDS5B-207ENST00000482955 CYB5RLQ6IPT4 315 aa37.52■■■■□ 3.6
PDS5B-207ENST00000482955 CHMP7Q8WUX9 453 aaPredicted RBP37.52■■■■□ 3.6
PDS5B-207ENST00000482955 ABCA10Q8WWZ4 1543 aa37.46■■■■□ 3.59
PDS5B-207ENST00000482955 GAPVD1Q14C86 1478 aa37.45■■■■□ 3.59
PDS5B-207ENST00000482955 SYNJ2O15056 1496 aa37.42■■■■□ 3.58
PDS5B-207ENST00000482955 ARAP1Q96P48 1450 aa37.4■■■■□ 3.58
PDS5B-207ENST00000482955 PBRM1Q86U86 1689 aa37.4■■■■□ 3.58
PDS5B-207ENST00000482955 CLASP1Q7Z460 1538 aa37.4■■■■□ 3.58
PDS5B-207ENST00000482955 SYNJ1O43426 1573 aa37.39■■■■□ 3.58
PDS5B-207ENST00000482955 ABCA5Q8WWZ7 1642 aa37.36■■■■□ 3.57
PDS5B-207ENST00000482955 WRNQ14191 1432 aaPredicted RBP eCLIP37.34■■■■□ 3.57
PDS5B-207ENST00000482955 TOP2BQ02880 1626 aa37.28■■■■□ 3.56
PDS5B-207ENST00000482955 BIVM-ERCC5R4GMW8 1640 aa37.28■■■■□ 3.56
PDS5B-207ENST00000482955 GRIN2AQ12879 1464 aa37.07■■■■□ 3.53
PDS5B-207ENST00000482955 ADAMTS12P58397 1594 aa37.04■■■■□ 3.52
PDS5B-207ENST00000482955 TRHP20396 242 aaPredicted RBP37.03■■■■□ 3.52
PDS5B-207ENST00000482955 FHAD1B1AJZ9 1412 aa37■■■■□ 3.51
PDS5B-207ENST00000482955 ERICH3Q5RHP9 1530 aa36.99■■■■□ 3.51
PDS5B-207ENST00000482955 NUP160Q12769 1436 aa36.96■■■■□ 3.51
PDS5B-207ENST00000482955 CEP170Q5SW79 1584 aa36.91■■■■□ 3.5
PDS5B-207ENST00000482955 ERCC6L2Q5T890 1561 aa36.81■■■■□ 3.48
PDS5B-207ENST00000482955 SHROOM2Q13796 1616 aa36.77■■■■□ 3.48
PDS5B-207ENST00000482955 JPH4Q96JJ6 628 aa36.63■■■■□ 3.45
PDS5B-207ENST00000482955 PRG4Q92954 1404 aaPredicted RBP36.59■■■■□ 3.45
PDS5B-207ENST00000482955 IGF1RP08069 1367 aa36.57■■■■□ 3.45
PDS5B-207ENST00000482955 KIF27Q86VH2 1401 aa36.57■■■■□ 3.44
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms