RNA–Protein interactions for RNA: ENST00000573451.5

SRRM2-214, Transcript of serine/arginine repetitive matrix 2, humanhuman

TSL 3

Gene SRRM2, Length 441 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM2-214ENST00000573451 NISCHQ9Y2I1 1504 aa19.53■□□□□ 0.72
SRRM2-214ENST00000573451 CCDC180Q9P1Z9 1646 aa17.54■□□□□ 0.4
SRRM2-214ENST00000573451 AEBP2Q6ZN18 517 aaPredicted RBP17.28■□□□□ 0.36
SRRM2-214ENST00000573451 ABCC9O60706 1549 aa17.11■□□□□ 0.33
SRRM2-214ENST00000573451 RB1CC1Q8TDY2 1594 aa16.51■□□□□ 0.23
SRRM2-214ENST00000573451 NACADO15069 1562 aa16.48■□□□□ 0.23
SRRM2-214ENST00000573451 MYO15BQ96JP2 1530 aa16.44■□□□□ 0.22
SRRM2-214ENST00000573451 CHIC1Q5VXU3 224 aa16.42■□□□□ 0.22
SRRM2-214ENST00000573451 DCAF1Q9Y4B6 1507 aa16.27■□□□□ 0.2
SRRM2-214ENST00000573451 ZCCHC6Q5VYS8 1495 aaKnown RBP16.27■□□□□ 0.19
SRRM2-214ENST00000573451 UNC13AQ9UPW8 1703 aa16.17■□□□□ 0.18
SRRM2-214ENST00000573451 BICRAQ9NZM4 1560 aa16.05■□□□□ 0.16
SRRM2-214ENST00000573451 DCAF8L2P0C7V8 631 aa16.05■□□□□ 0.16
SRRM2-214ENST00000573451 SHROOM4Q9ULL8 1493 aa15.97■□□□□ 0.15
SRRM2-214ENST00000573451 PABPN1Q86U42 306 aaKnown RBP eCLIP15.87■□□□□ 0.13
SRRM2-214ENST00000573451 DNAJC5BQ9UF47 199 aa15.87■□□□□ 0.13
SRRM2-214ENST00000573451 SCRIBQ14160 1630 aa15.81■□□□□ 0.12
SRRM2-214ENST00000573451 EIF4G1Q04637 1599 aaKnown RBP15.61■□□□□ 0.09
SRRM2-214ENST00000573451 CC2D2AQ9P2K1 1620 aa15.56■□□□□ 0.08
SRRM2-214ENST00000573451 CECR2Q9BXF3 1484 aa15.44■□□□□ 0.06
SRRM2-214ENST00000573451 SMARCA4P51532 1647 aa15.21■□□□□ 0.02
SRRM2-214ENST00000573451 NCAPD3P42695 1498 aa15.2■□□□□ 0.02
SRRM2-214ENST00000573451 PEG3Q9GZU2 1588 aa15.15■□□□□ 0.02
SRRM2-214ENST00000573451 BAZ1AQ9NRL2 1556 aaPredicted RBP15.15■□□□□ 0.02
SRRM2-214ENST00000573451 ATAD2BQ9ULI0 1458 aa15.14■□□□□ 0.01
SRRM2-214ENST00000573451 HMGXB3Q12766 1538 aa15.14■□□□□ 0.01
SRRM2-214ENST00000573451 SMARCA2P51531 1590 aa15.14■□□□□ 0.01
SRRM2-214ENST00000573451 MROH2BQ7Z745 1585 aa15.01□□□□□ -0.01
SRRM2-214ENST00000573451 BAZ1BQ9UIG0 1483 aaKnown RBP14.97□□□□□ -0.01
SRRM2-214ENST00000573451 LAMC3Q9Y6N6 1575 aa14.83□□□□□ -0.04
SRRM2-214ENST00000573451 WIZO95785 1651 aa14.83□□□□□ -0.04
SRRM2-214ENST00000573451 CUX2O14529 1486 aa14.81□□□□□ -0.04
SRRM2-214ENST00000573451 NESP48681 1621 aa14.78□□□□□ -0.04
SRRM2-214ENST00000573451 RSF1Q96T23 1441 aaPredicted RBP14.77□□□□□ -0.04
SRRM2-214ENST00000573451 SENP3Q9H4L4 574 aaPredicted RBP14.77□□□□□ -0.05
SRRM2-214ENST00000573451 ERCC6Q03468 1493 aa14.75□□□□□ -0.05
SRRM2-214ENST00000573451 THOC2Q8NI27 1593 aaKnown RBP14.72□□□□□ -0.05
SRRM2-214ENST00000573451 TOP2AP11388 1531 aaKnown RBP14.71□□□□□ -0.05
SRRM2-214ENST00000573451 CADPSQ9ULU8 1353 aa14.68□□□□□ -0.06
SRRM2-214ENST00000573451 KIF21AQ7Z4S6 1674 aa14.67□□□□□ -0.06
SRRM2-214ENST00000573451 PDS5BQ9NTI5 1447 aa14.66□□□□□ -0.06
SRRM2-214ENST00000573451 CFTRP13569 1480 aa14.62□□□□□ -0.07
SRRM2-214ENST00000573451 PHF23Q9BUL5 403 aaPredicted RBP14.57□□□□□ -0.08
SRRM2-214ENST00000573451 WDR62O43379 1518 aa14.56□□□□□ -0.08
SRRM2-214ENST00000573451 PRDM2Q13029 1718 aa14.55□□□□□ -0.08
SRRM2-214ENST00000573451 MRC2Q9UBG0 1479 aa14.54□□□□□ -0.08
SRRM2-214ENST00000573451 CEP164Q9UPV0 1460 aa14.5□□□□□ -0.09
SRRM2-214ENST00000573451 FANCD2Q9BXW9 1451 aa14.5□□□□□ -0.09
SRRM2-214ENST00000573451 CCDC88BA6NC98 1476 aa14.49□□□□□ -0.09
SRRM2-214ENST00000573451 DNAJC5Q9H3Z4 198 aa14.47□□□□□ -0.09
SRRM2-214ENST00000573451 URB2Q14146 1524 aaKnown RBP14.4□□□□□ -0.1
SRRM2-214ENST00000573451 ABCC8Q09428 1581 aa14.3□□□□□ -0.12
SRRM2-214ENST00000573451 TOPBP1Q92547 1522 aa14.28□□□□□ -0.12
SRRM2-214ENST00000573451 DNMBPQ6XZF7 1577 aa14.27□□□□□ -0.12
SRRM2-214ENST00000573451 IFT140Q96RY7 1462 aa14.24□□□□□ -0.13
SRRM2-214ENST00000573451 TARBP1Q13395 1621 aaKnown RBP14.19□□□□□ -0.14
SRRM2-214ENST00000573451 POLA1P09884 1462 aaPredicted RBP14.15□□□□□ -0.14
SRRM2-214ENST00000573451 WDR97A6NE52 1622 aa14.15□□□□□ -0.14
SRRM2-214ENST00000573451 ZNF608Q9ULD9 1512 aaPredicted RBP14.15□□□□□ -0.14
SRRM2-214ENST00000573451 EIF4G3O43432 1585 aaKnown RBP14.13□□□□□ -0.15
SRRM2-214ENST00000573451 CUX1P39880 1505 aa14.1□□□□□ -0.15
SRRM2-214ENST00000573451 FGD5Q6ZNL6 1462 aa14.06□□□□□ -0.16
SRRM2-214ENST00000573451 SOGA1O94964 1423 aa14.02□□□□□ -0.16
SRRM2-214ENST00000573451 SUPT5HO00267 1087 aaKnown RBP14.02□□□□□ -0.17
SRRM2-214ENST00000573451 OSCARQ8IYS5 282 aa14.02□□□□□ -0.17
SRRM2-214ENST00000573451 RAD54L2Q9Y4B4 1467 aa14.01□□□□□ -0.17
SRRM2-214ENST00000573451 AQRO60306 1485 aaKnown RBP eCLIP14□□□□□ -0.171e-26■■■■□ 23.3
SRRM2-214ENST00000573451 BIVM-ERCC5R4GMW8 1640 aa14□□□□□ -0.17
SRRM2-214ENST00000573451 CHD1O14646 1710 aa13.98□□□□□ -0.17
SRRM2-214ENST00000573451 TOP2BQ02880 1626 aa13.97□□□□□ -0.17
SRRM2-214ENST00000573451 ABCA10Q8WWZ4 1543 aa13.97□□□□□ -0.17
SRRM2-214ENST00000573451 ABCA5Q8WWZ7 1642 aa13.97□□□□□ -0.17
SRRM2-214ENST00000573451 MAGI1Q96QZ7 1491 aaPredicted RBP13.95□□□□□ -0.18
SRRM2-214ENST00000573451 GRIN2BQ13224 1484 aa13.93□□□□□ -0.18
SRRM2-214ENST00000573451 PBRM1Q86U86 1689 aa13.92□□□□□ -0.18
SRRM2-214ENST00000573451 TDRD9Q8NDG6 1382 aaKnown RBP13.92□□□□□ -0.18
SRRM2-214ENST00000573451 SYNJ1O43426 1573 aa13.92□□□□□ -0.18
SRRM2-214ENST00000573451 WRNQ14191 1432 aaPredicted RBP eCLIP13.9□□□□□ -0.18
SRRM2-214ENST00000573451 SNAPC4Q5SXM2 1469 aa13.9□□□□□ -0.18
SRRM2-214ENST00000573451 RIMBP3CA6NJZ7 1639 aa13.9□□□□□ -0.19
SRRM2-214ENST00000573451 RIMBP3BA6NNM3 1639 aa13.9□□□□□ -0.19
SRRM2-214ENST00000573451 RIMBP3Q9UFD9 1639 aa13.9□□□□□ -0.19
SRRM2-214ENST00000573451 GAPVD1Q14C86 1478 aa13.88□□□□□ -0.19
SRRM2-214ENST00000573451 ARHGEF11O15085 1522 aa13.88□□□□□ -0.19
SRRM2-214ENST00000573451 CLASP1Q7Z460 1538 aa13.88□□□□□ -0.19
SRRM2-214ENST00000573451 SYNJ2O15056 1496 aa13.87□□□□□ -0.19
SRRM2-214ENST00000573451 ERICH3Q5RHP9 1530 aa13.81□□□□□ -0.2
SRRM2-214ENST00000573451 ADAMTS12P58397 1594 aa13.81□□□□□ -0.2
SRRM2-214ENST00000573451 GRIN2AQ12879 1464 aa13.75□□□□□ -0.21
SRRM2-214ENST00000573451 ARAP1Q96P48 1450 aa13.75□□□□□ -0.21
SRRM2-214ENST00000573451 FOXD1Q16676 465 aa13.75□□□□□ -0.21
SRRM2-214ENST00000573451 FHAD1B1AJZ9 1412 aa13.74□□□□□ -0.21
SRRM2-214ENST00000573451 NUP160Q12769 1436 aa13.74□□□□□ -0.21
SRRM2-214ENST00000573451 CHMP7Q8WUX9 453 aaPredicted RBP13.74□□□□□ -0.21
SRRM2-214ENST00000573451 FBLN2P98095 1184 aa13.72□□□□□ -0.21
SRRM2-214ENST00000573451 TRIM41Q8WV44 630 aa13.72□□□□□ -0.21
SRRM2-214ENST00000573451 SHROOM2Q13796 1616 aa13.71□□□□□ -0.22
SRRM2-214ENST00000573451 CEP170Q5SW79 1584 aa13.7□□□□□ -0.22
SRRM2-214ENST00000573451 CUL7Q14999 1698 aa13.66□□□□□ -0.22
SRRM2-214ENST00000573451 KIF27Q86VH2 1401 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms