RNA–Protein interactions for RNA: ENST00000514139.2

RAP1GDS1-220, Transcript of Rap1 GTPase-GDP dissociation stimulator 1, humanhuman

TSL 5

Gene RAP1GDS1, Length 1,103 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAP1GDS1-220ENST00000514139 AEBP2Q6ZN18 517 aaPredicted RBP23.81■■□□□ 1.4
RAP1GDS1-220ENST00000514139 CHIC1Q5VXU3 224 aa22.31■■□□□ 1.16
RAP1GDS1-220ENST00000514139 SENP3Q9H4L4 574 aaPredicted RBP20.48■□□□□ 0.87
RAP1GDS1-220ENST00000514139 PHF23Q9BUL5 403 aaPredicted RBP20.11■□□□□ 0.81
RAP1GDS1-220ENST00000514139 NISCHQ9Y2I1 1504 aa19.19■□□□□ 0.66
RAP1GDS1-220ENST00000514139 FOXD1Q16676 465 aa19.12■□□□□ 0.65
RAP1GDS1-220ENST00000514139 POTEDQ86YR6 584 aa18.78■□□□□ 0.6
RAP1GDS1-220ENST00000514139 MSH5O43196 834 aa18.19■□□□□ 0.5
RAP1GDS1-220ENST00000514139 PLPPR3Q6T4P5 718 aa18.12■□□□□ 0.49
RAP1GDS1-220ENST00000514139 PIAS4Q8N2W9 510 aaPredicted RBP17.72■□□□□ 0.43
RAP1GDS1-220ENST00000514139 PPP6R1Q9UPN7 881 aa17.39■□□□□ 0.37
RAP1GDS1-220ENST00000514139 ADRA2BP18089 450 aa17.3■□□□□ 0.36
RAP1GDS1-220ENST00000514139 CCDC180Q9P1Z9 1646 aa17.07■□□□□ 0.32
RAP1GDS1-220ENST00000514139 ABCC9O60706 1549 aa16.83■□□□□ 0.28
RAP1GDS1-220ENST00000514139 DMRT2Q9Y5R5 561 aa16.13■□□□□ 0.17
RAP1GDS1-220ENST00000514139 RB1CC1Q8TDY2 1594 aa16.11■□□□□ 0.17
RAP1GDS1-220ENST00000514139 MAPK8IP2Q13387 824 aaPredicted RBP16.07■□□□□ 0.16
RAP1GDS1-220ENST00000514139 NACADO15069 1562 aa16.07■□□□□ 0.16
RAP1GDS1-220ENST00000514139 DCAF8L2P0C7V8 631 aa16.03■□□□□ 0.16
RAP1GDS1-220ENST00000514139 ZCCHC6Q5VYS8 1495 aaKnown RBP15.99■□□□□ 0.15
RAP1GDS1-220ENST00000514139 KCNA4P22459 653 aa15.98■□□□□ 0.15
RAP1GDS1-220ENST00000514139 CACNB1Q02641 598 aaPredicted RBP15.98■□□□□ 0.15
RAP1GDS1-220ENST00000514139 PPP4R3CPQ6ZMV5 832 aa15.98■□□□□ 0.15
RAP1GDS1-220ENST00000514139 MYO15BQ96JP2 1530 aa15.94■□□□□ 0.14
RAP1GDS1-220ENST00000514139 SCAF1Q9H7N4 1312 aaKnown RBP15.93■□□□□ 0.14
RAP1GDS1-220ENST00000514139 DCAF1Q9Y4B6 1507 aa15.85■□□□□ 0.13
RAP1GDS1-220ENST00000514139 UNC13AQ9UPW8 1703 aa15.74■□□□□ 0.11
RAP1GDS1-220ENST00000514139 PABPN1Q86U42 306 aaKnown RBP eCLIP15.71■□□□□ 0.11
RAP1GDS1-220ENST00000514139 BICRAQ9NZM4 1560 aa15.66■□□□□ 0.1
RAP1GDS1-220ENST00000514139 NCBP3Q53F19 620 aaKnown RBP15.66■□□□□ 0.1
RAP1GDS1-220ENST00000514139 SCRIBQ14160 1630 aa15.62■□□□□ 0.09
RAP1GDS1-220ENST00000514139 DNAJC5BQ9UF47 199 aa15.52■□□□□ 0.08
RAP1GDS1-220ENST00000514139 DCAF8L1A6NGE4 600 aa15.48■□□□□ 0.07
RAP1GDS1-220ENST00000514139 CNKSR2Q8WXI2 1034 aa15.48■□□□□ 0.07
RAP1GDS1-220ENST00000514139 SHROOM4Q9ULL8 1493 aa15.46■□□□□ 0.06
RAP1GDS1-220ENST00000514139 NPM3O75607 178 aaKnown RBP15.44■□□□□ 0.06
RAP1GDS1-220ENST00000514139 RNF39Q9H2S5 420 aa15.44■□□□□ 0.06
RAP1GDS1-220ENST00000514139 HOXD11P31277 338 aaPredicted RBP15.3■□□□□ 0.04
RAP1GDS1-220ENST00000514139 SLC4A1APQ9BWU0 796 aaKnown RBP15.26■□□□□ 0.03
RAP1GDS1-220ENST00000514139 EIF4G1Q04637 1599 aaKnown RBP15.25■□□□□ 0.03
RAP1GDS1-220ENST00000514139 C1QBPQ07021 282 aaKnown RBP15.22■□□□□ 0.03
RAP1GDS1-220ENST00000514139 CC2D2AQ9P2K1 1620 aa15.21■□□□□ 0.02
RAP1GDS1-220ENST00000514139 EHMT2Q96KQ7 1210 aa15.17■□□□□ 0.02
RAP1GDS1-220ENST00000514139 RNF216Q9NWF9 866 aaPredicted RBP15.12■□□□□ 0.01
RAP1GDS1-220ENST00000514139 CECR2Q9BXF3 1484 aa15.12■□□□□ 0.01
RAP1GDS1-220ENST00000514139 SMARCA4P51532 1647 aa14.92□□□□□ -0.02
RAP1GDS1-220ENST00000514139 BAZ1AQ9NRL2 1556 aaPredicted RBP14.87□□□□□ -0.03
RAP1GDS1-220ENST00000514139 ATAD2BQ9ULI0 1458 aa14.86□□□□□ -0.03
RAP1GDS1-220ENST00000514139 CSRNP3Q8WYN3 585 aa14.85□□□□□ -0.03
RAP1GDS1-220ENST00000514139 NCAPD3P42695 1498 aa14.83□□□□□ -0.03
RAP1GDS1-220ENST00000514139 MROH2BQ7Z745 1585 aa14.81□□□□□ -0.04
RAP1GDS1-220ENST00000514139 SMARCA2P51531 1590 aa14.81□□□□□ -0.04
RAP1GDS1-220ENST00000514139 HMGXB3Q12766 1538 aa14.76□□□□□ -0.05
RAP1GDS1-220ENST00000514139 PEG3Q9GZU2 1588 aa14.76□□□□□ -0.05
RAP1GDS1-220ENST00000514139 BAZ1BQ9UIG0 1483 aaKnown RBP14.72□□□□□ -0.05
RAP1GDS1-220ENST00000514139 ZBTB22O15209 634 aa14.72□□□□□ -0.05
RAP1GDS1-220ENST00000514139 WIZO95785 1651 aa14.63□□□□□ -0.07
RAP1GDS1-220ENST00000514139 FOXD4L1Q9NU39 408 aa14.63□□□□□ -0.07
RAP1GDS1-220ENST00000514139 POTEHQ6S545 545 aa14.61□□□□□ -0.07
RAP1GDS1-220ENST00000514139 RSF1Q96T23 1441 aaPredicted RBP14.6□□□□□ -0.07
RAP1GDS1-220ENST00000514139 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.57□□□□□ -0.08
RAP1GDS1-220ENST00000514139 NESP48681 1621 aa14.55□□□□□ -0.08
RAP1GDS1-220ENST00000514139 SLC4A2P04920 1241 aa14.51□□□□□ -0.09
RAP1GDS1-220ENST00000514139 ERCC6Q03468 1493 aa14.49□□□□□ -0.09
RAP1GDS1-220ENST00000514139 TOP2AP11388 1531 aaKnown RBP14.48□□□□□ -0.09
RAP1GDS1-220ENST00000514139 LAMC3Q9Y6N6 1575 aa14.45□□□□□ -0.1
RAP1GDS1-220ENST00000514139 CADPSQ9ULU8 1353 aa14.4□□□□□ -0.1
RAP1GDS1-220ENST00000514139 PDS5BQ9NTI5 1447 aa14.35□□□□□ -0.11
RAP1GDS1-220ENST00000514139 CUX2O14529 1486 aa14.35□□□□□ -0.11
RAP1GDS1-220ENST00000514139 THOC2Q8NI27 1593 aaKnown RBP14.34□□□□□ -0.11
RAP1GDS1-220ENST00000514139 KIF21AQ7Z4S6 1674 aa14.34□□□□□ -0.11
RAP1GDS1-220ENST00000514139 CFTRP13569 1480 aa14.31□□□□□ -0.12
RAP1GDS1-220ENST00000514139 CCDC88BA6NC98 1476 aa14.31□□□□□ -0.12
RAP1GDS1-220ENST00000514139 MYCNP04198 464 aaPredicted RBP14.27□□□□□ -0.13
RAP1GDS1-220ENST00000514139 FANCD2Q9BXW9 1451 aa14.25□□□□□ -0.13
RAP1GDS1-220ENST00000514139 MRC2Q9UBG0 1479 aa14.25□□□□□ -0.13
RAP1GDS1-220ENST00000514139 DSG3P32926 999 aa14.24□□□□□ -0.13
RAP1GDS1-220ENST00000514139 CEP164Q9UPV0 1460 aa14.24□□□□□ -0.13
RAP1GDS1-220ENST00000514139 WDR62O43379 1518 aa14.2□□□□□ -0.14
RAP1GDS1-220ENST00000514139 CAPN15O75808 1086 aa14.17□□□□□ -0.14
RAP1GDS1-220ENST00000514139 SUPT5HO00267 1087 aaKnown RBP14.16□□□□□ -0.14
RAP1GDS1-220ENST00000514139 U3KPZ7 1027 aaPredicted RBP14.16□□□□□ -0.14
RAP1GDS1-220ENST00000514139 PRDM2Q13029 1718 aa14.15□□□□□ -0.14
RAP1GDS1-220ENST00000514139 URB2Q14146 1524 aaKnown RBP14.14□□□□□ -0.15
RAP1GDS1-220ENST00000514139 SPINK5Q9NQ38 1064 aaPredicted RBP14.13□□□□□ -0.15
RAP1GDS1-220ENST00000514139 ATXN8OSP0DMR3 200 aa14.08□□□□□ -0.16
RAP1GDS1-220ENST00000514139 TOPBP1Q92547 1522 aa14.02□□□□□ -0.16
RAP1GDS1-220ENST00000514139 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14□□□□□ -0.17
RAP1GDS1-220ENST00000514139 HNRNPUL2Q1KMD3 747 aaKnown RBP14□□□□□ -0.17
RAP1GDS1-220ENST00000514139 DNAJC5Q9H3Z4 198 aa13.99□□□□□ -0.17
RAP1GDS1-220ENST00000514139 DNMBPQ6XZF7 1577 aa13.99□□□□□ -0.17
RAP1GDS1-220ENST00000514139 SAMD1Q6SPF0 538 aaPredicted RBP13.97□□□□□ -0.17
RAP1GDS1-220ENST00000514139 ABCC8Q09428 1581 aa13.96□□□□□ -0.18
RAP1GDS1-220ENST00000514139 IFT140Q96RY7 1462 aa13.94□□□□□ -0.18
RAP1GDS1-220ENST00000514139 ZNF608Q9ULD9 1512 aaPredicted RBP13.92□□□□□ -0.18
RAP1GDS1-220ENST00000514139 POLA1P09884 1462 aaPredicted RBP13.91□□□□□ -0.18
RAP1GDS1-220ENST00000514139 CUX1P39880 1505 aa13.9□□□□□ -0.18
RAP1GDS1-220ENST00000514139 FGD5Q6ZNL6 1462 aa13.87□□□□□ -0.19
RAP1GDS1-220ENST00000514139 TARBP1Q13395 1621 aaKnown RBP13.86□□□□□ -0.19
RAP1GDS1-220ENST00000514139 RAD54L2Q9Y4B4 1467 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms