Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
CNOT4O95628 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CNOT4O95628 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CNOT4O95628 SF1-220ENST00000626028 704 ntTSL 2 BASIC19.9■□□□□ 0.78
CNOT4O95628 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC19.9■□□□□ 0.78
CNOT4O95628 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC19.9■□□□□ 0.78
CNOT4O95628 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CNOT4O95628 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CNOT4O95628 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CNOT4O95628 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC19.89■□□□□ 0.77
CNOT4O95628 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CNOT4O95628 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CNOT4O95628 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CNOT4O95628 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
CNOT4O95628 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC19.89■□□□□ 0.77
CNOT4O95628 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
CNOT4O95628 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CNOT4O95628 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CNOT4O95628 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
CNOT4O95628 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CNOT4O95628 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
CNOT4O95628 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
CNOT4O95628 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
CNOT4O95628 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CNOT4O95628 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CNOT4O95628 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CNOT4O95628 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CNOT4O95628 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CNOT4O95628 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC19.88■□□□□ 0.77
CNOT4O95628 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
CNOT4O95628 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
CNOT4O95628 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CNOT4O95628 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CNOT4O95628 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CNOT4O95628 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CNOT4O95628 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
CNOT4O95628 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC19.87■□□□□ 0.77
CNOT4O95628 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC19.87■□□□□ 0.77
CNOT4O95628 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
CNOT4O95628 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CNOT4O95628 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
CNOT4O95628 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC19.87■□□□□ 0.77
CNOT4O95628 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CNOT4O95628 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
CNOT4O95628 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC19.87■□□□□ 0.77
CNOT4O95628 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
CNOT4O95628 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CNOT4O95628 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
CNOT4O95628 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CNOT4O95628 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CNOT4O95628 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC19.86■□□□□ 0.77
CNOT4O95628 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CNOT4O95628 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CNOT4O95628 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
CNOT4O95628 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CNOT4O95628 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CNOT4O95628 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
CNOT4O95628 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CNOT4O95628 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
CNOT4O95628 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CNOT4O95628 VGF-203ENST00000611537 1622 ntTSL 5 BASIC19.85■□□□□ 0.77
CNOT4O95628 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
CNOT4O95628 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CNOT4O95628 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
CNOT4O95628 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CNOT4O95628 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC19.85■□□□□ 0.77
CNOT4O95628 AL138724.1-201ENST00000606771 1088 ntBASIC19.85■□□□□ 0.77
CNOT4O95628 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC19.85■□□□□ 0.77
CNOT4O95628 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC19.85■□□□□ 0.77
CNOT4O95628 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CNOT4O95628 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
CNOT4O95628 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC19.84■□□□□ 0.77
CNOT4O95628 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CNOT4O95628 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CNOT4O95628 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CNOT4O95628 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CNOT4O95628 GUK1-205ENST00000366722 850 ntTSL 3 BASIC19.84■□□□□ 0.77
CNOT4O95628 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CNOT4O95628 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CNOT4O95628 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CNOT4O95628 FP325331.1-202ENST00000623531 1380 ntBASIC19.83■□□□□ 0.77
CNOT4O95628 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
CNOT4O95628 EBPL-204ENST00000378272 766 ntTSL 3 BASIC19.83■□□□□ 0.77
CNOT4O95628 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC19.83■□□□□ 0.77
CNOT4O95628 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC19.83■□□□□ 0.77
CNOT4O95628 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC19.83■□□□□ 0.76
CNOT4O95628 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CNOT4O95628 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
CNOT4O95628 AC004812.2-201ENST00000611079 2094 ntBASIC19.83■□□□□ 0.76
CNOT4O95628 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC19.83■□□□□ 0.76
CNOT4O95628 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.76
CNOT4O95628 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CNOT4O95628 SYT6-210ENST00000641643 1587 ntBASIC19.83■□□□□ 0.76
CNOT4O95628 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC19.83■□□□□ 0.76
CNOT4O95628 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
CNOT4O95628 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
CNOT4O95628 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC19.82■□□□□ 0.76
CNOT4O95628 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CNOT4O95628 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CNOT4O95628 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms