Protein–RNA interactions for Protein: E9PKD4

NPIPA5, Nuclear pore complex-interacting protein family member A5, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA5E9PKD4 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
NPIPA5E9PKD4 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
NPIPA5E9PKD4 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC20.66■□□□□ 0.9
NPIPA5E9PKD4 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
NPIPA5E9PKD4 AC009102.2-201ENST00000606772 1639 ntBASIC20.66■□□□□ 0.9
NPIPA5E9PKD4 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
NPIPA5E9PKD4 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
NPIPA5E9PKD4 AC004812.2-201ENST00000611079 2094 ntBASIC20.66■□□□□ 0.9
NPIPA5E9PKD4 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC20.66■□□□□ 0.9
NPIPA5E9PKD4 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
NPIPA5E9PKD4 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
NPIPA5E9PKD4 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
NPIPA5E9PKD4 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
NPIPA5E9PKD4 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
NPIPA5E9PKD4 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
NPIPA5E9PKD4 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
NPIPA5E9PKD4 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
NPIPA5E9PKD4 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC20.65■□□□□ 0.9
NPIPA5E9PKD4 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
NPIPA5E9PKD4 LGR4-203ENST00000480977 492 ntTSL 2 BASIC20.65■□□□□ 0.9
NPIPA5E9PKD4 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC20.65■□□□□ 0.9
NPIPA5E9PKD4 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC20.65■□□□□ 0.9
NPIPA5E9PKD4 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC20.65■□□□□ 0.9
NPIPA5E9PKD4 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC20.65■□□□□ 0.9
NPIPA5E9PKD4 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC20.64■□□□□ 0.9
NPIPA5E9PKD4 SHD-204ENST00000599689 1729 ntTSL 5 BASIC20.64■□□□□ 0.9
NPIPA5E9PKD4 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
NPIPA5E9PKD4 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC20.64■□□□□ 0.9
NPIPA5E9PKD4 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
NPIPA5E9PKD4 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
NPIPA5E9PKD4 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
NPIPA5E9PKD4 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
NPIPA5E9PKD4 SERBP1P1-201ENST00000396021 1160 ntBASIC20.64■□□□□ 0.89
NPIPA5E9PKD4 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC20.64■□□□□ 0.89
NPIPA5E9PKD4 AL136967.2-201ENST00000623968 743 ntBASIC20.64■□□□□ 0.89
NPIPA5E9PKD4 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC20.64■□□□□ 0.89
NPIPA5E9PKD4 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC20.64■□□□□ 0.89
NPIPA5E9PKD4 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC20.64■□□□□ 0.89
NPIPA5E9PKD4 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
NPIPA5E9PKD4 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
NPIPA5E9PKD4 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC20.64■□□□□ 0.89
NPIPA5E9PKD4 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
NPIPA5E9PKD4 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC20.63■□□□□ 0.89
NPIPA5E9PKD4 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
NPIPA5E9PKD4 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
NPIPA5E9PKD4 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
NPIPA5E9PKD4 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
NPIPA5E9PKD4 PTMA-205ENST00000410064 814 ntTSL 2 BASIC20.63■□□□□ 0.89
NPIPA5E9PKD4 AC105265.2-201ENST00000467189 838 ntBASIC20.63■□□□□ 0.89
NPIPA5E9PKD4 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
NPIPA5E9PKD4 MIR4767-201ENST00000582827 78 ntBASIC20.63■□□□□ 0.89
NPIPA5E9PKD4 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
NPIPA5E9PKD4 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
NPIPA5E9PKD4 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
NPIPA5E9PKD4 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
NPIPA5E9PKD4 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
NPIPA5E9PKD4 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
NPIPA5E9PKD4 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
NPIPA5E9PKD4 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
NPIPA5E9PKD4 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
NPIPA5E9PKD4 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC20.62■□□□□ 0.89
NPIPA5E9PKD4 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
NPIPA5E9PKD4 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC20.62■□□□□ 0.89
NPIPA5E9PKD4 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
NPIPA5E9PKD4 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC20.62■□□□□ 0.89
NPIPA5E9PKD4 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
NPIPA5E9PKD4 RARRES2P6-201ENST00000567333 442 ntBASIC20.62■□□□□ 0.89
NPIPA5E9PKD4 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
NPIPA5E9PKD4 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
NPIPA5E9PKD4 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
NPIPA5E9PKD4 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
NPIPA5E9PKD4 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
NPIPA5E9PKD4 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
NPIPA5E9PKD4 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC20.61■□□□□ 0.89
NPIPA5E9PKD4 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
NPIPA5E9PKD4 PTCHD3P2-201ENST00000424937 1205 ntBASIC20.61■□□□□ 0.89
NPIPA5E9PKD4 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC20.61■□□□□ 0.89
NPIPA5E9PKD4 AP001330.3-201ENST00000520123 633 ntBASIC20.61■□□□□ 0.89
NPIPA5E9PKD4 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
NPIPA5E9PKD4 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
NPIPA5E9PKD4 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC20.61■□□□□ 0.89
NPIPA5E9PKD4 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC20.61■□□□□ 0.89
NPIPA5E9PKD4 ABCB10P4-201ENST00000566803 2184 ntBASIC20.61■□□□□ 0.89
NPIPA5E9PKD4 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
NPIPA5E9PKD4 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
NPIPA5E9PKD4 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
NPIPA5E9PKD4 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
NPIPA5E9PKD4 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
NPIPA5E9PKD4 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
NPIPA5E9PKD4 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
NPIPA5E9PKD4 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC20.6■□□□□ 0.89
NPIPA5E9PKD4 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
NPIPA5E9PKD4 MIR939-201ENST00000401314 82 ntBASIC20.6■□□□□ 0.89
NPIPA5E9PKD4 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
NPIPA5E9PKD4 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC20.6■□□□□ 0.89
NPIPA5E9PKD4 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC20.6■□□□□ 0.89
NPIPA5E9PKD4 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
NPIPA5E9PKD4 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
NPIPA5E9PKD4 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
NPIPA5E9PKD4 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms