Protein–RNA interactions for Protein: Q9Y5I4

PCDHAC2, Protocadherin alpha-C2, humanhuman

Predictions only

Length 1,007 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHAC2Q9Y5I4 ALDH1A3-203ENST00000557963 1670 ntBASIC27.17■■□□□ 1.94
PCDHAC2Q9Y5I4 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC27.16■■□□□ 1.94
PCDHAC2Q9Y5I4 EI24-204ENST00000527235 1625 ntTSL 5 BASIC27.16■■□□□ 1.94
PCDHAC2Q9Y5I4 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
PCDHAC2Q9Y5I4 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC27.16■■□□□ 1.94
PCDHAC2Q9Y5I4 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC27.16■■□□□ 1.94
PCDHAC2Q9Y5I4 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC27.15■■□□□ 1.94
PCDHAC2Q9Y5I4 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC27.15■■□□□ 1.94
PCDHAC2Q9Y5I4 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC27.15■■□□□ 1.94
PCDHAC2Q9Y5I4 ASB1-202ENST00000409297 878 ntTSL 5 BASIC27.15■■□□□ 1.94
PCDHAC2Q9Y5I4 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC27.15■■□□□ 1.94
PCDHAC2Q9Y5I4 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC27.15■■□□□ 1.94
PCDHAC2Q9Y5I4 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC27.15■■□□□ 1.94
PCDHAC2Q9Y5I4 AC126544.1-201ENST00000580842 1059 ntBASIC27.15■■□□□ 1.94
PCDHAC2Q9Y5I4 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC27.15■■□□□ 1.94
PCDHAC2Q9Y5I4 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC27.15■■□□□ 1.94
PCDHAC2Q9Y5I4 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
PCDHAC2Q9Y5I4 TSPY26P-201ENST00000476365 1326 ntBASIC27.15■■□□□ 1.94
PCDHAC2Q9Y5I4 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
PCDHAC2Q9Y5I4 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC27.14■■□□□ 1.94
PCDHAC2Q9Y5I4 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC27.14■■□□□ 1.94
PCDHAC2Q9Y5I4 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
PCDHAC2Q9Y5I4 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
PCDHAC2Q9Y5I4 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC27.14■■□□□ 1.94
PCDHAC2Q9Y5I4 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC27.14■■□□□ 1.94
PCDHAC2Q9Y5I4 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC27.14■■□□□ 1.94
PCDHAC2Q9Y5I4 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC27.14■■□□□ 1.94
PCDHAC2Q9Y5I4 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
PCDHAC2Q9Y5I4 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.93
PCDHAC2Q9Y5I4 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC27.13■■□□□ 1.93
PCDHAC2Q9Y5I4 TMEM202-AS1-202ENST00000565181 2325 ntBASIC27.13■■□□□ 1.93
PCDHAC2Q9Y5I4 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC27.13■■□□□ 1.93
PCDHAC2Q9Y5I4 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC27.13■■□□□ 1.93
PCDHAC2Q9Y5I4 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
PCDHAC2Q9Y5I4 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC27.12■■□□□ 1.93
PCDHAC2Q9Y5I4 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC27.12■■□□□ 1.93
PCDHAC2Q9Y5I4 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC27.12■■□□□ 1.93
PCDHAC2Q9Y5I4 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
PCDHAC2Q9Y5I4 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC27.12■■□□□ 1.93
PCDHAC2Q9Y5I4 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
PCDHAC2Q9Y5I4 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC27.11■■□□□ 1.93
PCDHAC2Q9Y5I4 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC27.11■■□□□ 1.93
PCDHAC2Q9Y5I4 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC27.11■■□□□ 1.93
PCDHAC2Q9Y5I4 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
PCDHAC2Q9Y5I4 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC27.11■■□□□ 1.93
PCDHAC2Q9Y5I4 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC27.11■■□□□ 1.93
PCDHAC2Q9Y5I4 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC27.1■■□□□ 1.93
PCDHAC2Q9Y5I4 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC27.1■■□□□ 1.93
PCDHAC2Q9Y5I4 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC27.1■■□□□ 1.93
PCDHAC2Q9Y5I4 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
PCDHAC2Q9Y5I4 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC27.1■■□□□ 1.93
PCDHAC2Q9Y5I4 AK1-201ENST00000223836 736 ntTSL 3 BASIC27.1■■□□□ 1.93
PCDHAC2Q9Y5I4 KRT18P5-201ENST00000436075 1291 ntBASIC27.1■■□□□ 1.93
PCDHAC2Q9Y5I4 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC27.1■■□□□ 1.93
PCDHAC2Q9Y5I4 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC27.1■■□□□ 1.93
PCDHAC2Q9Y5I4 DUX4L2-201ENST00000561772 1275 ntBASIC27.1■■□□□ 1.93
PCDHAC2Q9Y5I4 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC27.1■■□□□ 1.93
PCDHAC2Q9Y5I4 AC022517.1-201ENST00000592429 346 ntBASIC27.1■■□□□ 1.93
PCDHAC2Q9Y5I4 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC27.1■■□□□ 1.93
PCDHAC2Q9Y5I4 DUX4L6-201ENST00000626483 1275 ntBASIC27.1■■□□□ 1.93
PCDHAC2Q9Y5I4 DUX4L1-201ENST00000627662 1275 ntBASIC27.1■■□□□ 1.93
PCDHAC2Q9Y5I4 DUX4L8-201ENST00000629013 1275 ntBASIC27.1■■□□□ 1.93
PCDHAC2Q9Y5I4 DUX4L3-201ENST00000630187 1275 ntBASIC27.1■■□□□ 1.93
PCDHAC2Q9Y5I4 DUX4L7-201ENST00000630678 1275 ntBASIC27.1■■□□□ 1.93
PCDHAC2Q9Y5I4 DUX4L5-201ENST00000630834 1275 ntBASIC27.1■■□□□ 1.93
PCDHAC2Q9Y5I4 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC27.09■■□□□ 1.93
PCDHAC2Q9Y5I4 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
PCDHAC2Q9Y5I4 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
PCDHAC2Q9Y5I4 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
PCDHAC2Q9Y5I4 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC27.09■■□□□ 1.93
PCDHAC2Q9Y5I4 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC27.09■■□□□ 1.93
PCDHAC2Q9Y5I4 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC27.09■■□□□ 1.93
PCDHAC2Q9Y5I4 SHF-207ENST00000560540 2062 ntTSL 5 BASIC27.09■■□□□ 1.93
PCDHAC2Q9Y5I4 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC27.08■■□□□ 1.93
PCDHAC2Q9Y5I4 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
PCDHAC2Q9Y5I4 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC27.08■■□□□ 1.93
PCDHAC2Q9Y5I4 AC034268.1-201ENST00000441047 882 ntBASIC27.08■■□□□ 1.93
PCDHAC2Q9Y5I4 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC27.08■■□□□ 1.93
PCDHAC2Q9Y5I4 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC27.08■■□□□ 1.93
PCDHAC2Q9Y5I4 MIR6084-201ENST00000622012 110 ntBASIC27.08■■□□□ 1.93
PCDHAC2Q9Y5I4 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC27.08■■□□□ 1.93
PCDHAC2Q9Y5I4 AC022211.4-201ENST00000625094 2161 ntBASIC27.08■■□□□ 1.93
PCDHAC2Q9Y5I4 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC27.08■■□□□ 1.93
PCDHAC2Q9Y5I4 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC27.07■■□□□ 1.92
PCDHAC2Q9Y5I4 AL161729.1-201ENST00000604104 1402 ntBASIC27.07■■□□□ 1.92
PCDHAC2Q9Y5I4 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC27.07■■□□□ 1.92
PCDHAC2Q9Y5I4 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
PCDHAC2Q9Y5I4 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC27.07■■□□□ 1.92
PCDHAC2Q9Y5I4 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC27.07■■□□□ 1.92
PCDHAC2Q9Y5I4 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC27.07■■□□□ 1.92
PCDHAC2Q9Y5I4 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC27.07■■□□□ 1.92
PCDHAC2Q9Y5I4 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC27.07■■□□□ 1.92
PCDHAC2Q9Y5I4 AC092437.1-201ENST00000624794 1048 ntBASIC27.07■■□□□ 1.92
PCDHAC2Q9Y5I4 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC27.07■■□□□ 1.92
PCDHAC2Q9Y5I4 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC27.07■■□□□ 1.92
PCDHAC2Q9Y5I4 AC141586.4-201ENST00000624558 1573 ntBASIC27.06■■□□□ 1.92
PCDHAC2Q9Y5I4 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC27.06■■□□□ 1.92
PCDHAC2Q9Y5I4 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC27.06■■□□□ 1.92
PCDHAC2Q9Y5I4 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
PCDHAC2Q9Y5I4 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC27.06■■□□□ 1.92
Retrieved 100 of 98,524 protein–RNA pairs in 113.8 ms