Protein–RNA interactions for Protein: Q9UBL6

CPNE7, Copine-7, humanhuman

Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE7Q9UBL6 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
CPNE7Q9UBL6 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
CPNE7Q9UBL6 AL139125.2-201ENST00000623134 1869 ntBASIC21.96■■□□□ 1.11
CPNE7Q9UBL6 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CPNE7Q9UBL6 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC21.96■■□□□ 1.11
CPNE7Q9UBL6 SERBP1P1-201ENST00000396021 1160 ntBASIC21.96■■□□□ 1.11
CPNE7Q9UBL6 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC21.96■■□□□ 1.11
CPNE7Q9UBL6 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC21.96■■□□□ 1.11
CPNE7Q9UBL6 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC21.96■■□□□ 1.11
CPNE7Q9UBL6 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.11
CPNE7Q9UBL6 VGF-203ENST00000611537 1622 ntTSL 5 BASIC21.95■■□□□ 1.1
CPNE7Q9UBL6 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CPNE7Q9UBL6 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC21.95■■□□□ 1.1
CPNE7Q9UBL6 PTCHD3P2-201ENST00000424937 1205 ntBASIC21.95■■□□□ 1.1
CPNE7Q9UBL6 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CPNE7Q9UBL6 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC21.95■■□□□ 1.1
CPNE7Q9UBL6 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC21.95■■□□□ 1.1
CPNE7Q9UBL6 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CPNE7Q9UBL6 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC21.95■■□□□ 1.1
CPNE7Q9UBL6 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CPNE7Q9UBL6 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CPNE7Q9UBL6 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CPNE7Q9UBL6 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC21.94■■□□□ 1.1
CPNE7Q9UBL6 EDA-201ENST00000338901 1233 ntBASIC21.94■■□□□ 1.1
CPNE7Q9UBL6 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
CPNE7Q9UBL6 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CPNE7Q9UBL6 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC21.93■■□□□ 1.1
CPNE7Q9UBL6 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC21.93■■□□□ 1.1
CPNE7Q9UBL6 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC21.93■■□□□ 1.1
CPNE7Q9UBL6 AC142381.2-201ENST00000566120 298 ntBASIC21.93■■□□□ 1.1
CPNE7Q9UBL6 AL138724.1-201ENST00000606771 1088 ntBASIC21.93■■□□□ 1.1
CPNE7Q9UBL6 AL031432.3-201ENST00000607698 485 ntBASIC21.93■■□□□ 1.1
CPNE7Q9UBL6 AL355001.2-201ENST00000620617 1191 ntBASIC21.93■■□□□ 1.1
CPNE7Q9UBL6 AC009086.3-201ENST00000623486 1008 ntBASIC21.93■■□□□ 1.1
CPNE7Q9UBL6 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC21.93■■□□□ 1.1
CPNE7Q9UBL6 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
CPNE7Q9UBL6 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
CPNE7Q9UBL6 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC21.92■■□□□ 1.1
CPNE7Q9UBL6 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC21.92■■□□□ 1.1
CPNE7Q9UBL6 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
CPNE7Q9UBL6 AC006455.2-201ENST00000429931 906 ntBASIC21.92■■□□□ 1.1
CPNE7Q9UBL6 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC21.92■■□□□ 1.1
CPNE7Q9UBL6 SHD-204ENST00000599689 1729 ntTSL 5 BASIC21.92■■□□□ 1.1
CPNE7Q9UBL6 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
CPNE7Q9UBL6 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CPNE7Q9UBL6 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CPNE7Q9UBL6 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CPNE7Q9UBL6 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CPNE7Q9UBL6 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CPNE7Q9UBL6 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CPNE7Q9UBL6 PTMA-205ENST00000410064 814 ntTSL 2 BASIC21.91■■□□□ 1.1
CPNE7Q9UBL6 SUDS3P1-201ENST00000505831 966 ntBASIC21.91■■□□□ 1.1
CPNE7Q9UBL6 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC21.91■■□□□ 1.1
CPNE7Q9UBL6 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC21.91■■□□□ 1.1
CPNE7Q9UBL6 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
CPNE7Q9UBL6 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CPNE7Q9UBL6 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CPNE7Q9UBL6 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
CPNE7Q9UBL6 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CPNE7Q9UBL6 MIR4767-201ENST00000582827 78 ntBASIC21.9■■□□□ 1.1
CPNE7Q9UBL6 AC011298.3-201ENST00000615796 283 ntBASIC21.9■■□□□ 1.1
CPNE7Q9UBL6 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CPNE7Q9UBL6 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CPNE7Q9UBL6 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CPNE7Q9UBL6 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC21.9■■□□□ 1.1
CPNE7Q9UBL6 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC21.89■■□□□ 1.1
CPNE7Q9UBL6 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
CPNE7Q9UBL6 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC21.89■■□□□ 1.1
CPNE7Q9UBL6 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC21.89■■□□□ 1.1
CPNE7Q9UBL6 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
CPNE7Q9UBL6 GRAMD4P4-201ENST00000613563 1115 ntBASIC21.89■■□□□ 1.09
CPNE7Q9UBL6 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
CPNE7Q9UBL6 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC21.89■■□□□ 1.09
CPNE7Q9UBL6 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC21.89■■□□□ 1.09
CPNE7Q9UBL6 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC21.89■■□□□ 1.09
CPNE7Q9UBL6 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC21.89■■□□□ 1.09
CPNE7Q9UBL6 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC21.89■■□□□ 1.09
CPNE7Q9UBL6 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CPNE7Q9UBL6 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC21.88■■□□□ 1.09
CPNE7Q9UBL6 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CPNE7Q9UBL6 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CPNE7Q9UBL6 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC21.88■■□□□ 1.09
CPNE7Q9UBL6 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
CPNE7Q9UBL6 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
CPNE7Q9UBL6 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CPNE7Q9UBL6 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
CPNE7Q9UBL6 HES6-206ENST00000409574 738 ntTSL 2 BASIC21.88■■□□□ 1.09
CPNE7Q9UBL6 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC21.88■■□□□ 1.09
CPNE7Q9UBL6 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC21.88■■□□□ 1.09
CPNE7Q9UBL6 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
CPNE7Q9UBL6 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CPNE7Q9UBL6 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CPNE7Q9UBL6 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
CPNE7Q9UBL6 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
CPNE7Q9UBL6 AC004812.2-201ENST00000611079 2094 ntBASIC21.87■■□□□ 1.09
CPNE7Q9UBL6 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
CPNE7Q9UBL6 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
CPNE7Q9UBL6 EBPL-204ENST00000378272 766 ntTSL 3 BASIC21.87■■□□□ 1.09
CPNE7Q9UBL6 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
CPNE7Q9UBL6 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC21.87■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms