Protein–RNA interactions for Protein: Q9H1A7

POLR2J3, DNA-directed RNA polymerase II subunit RPB11-b2, humanhuman

Known RBP Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3Q9H1A7 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
POLR2J3Q9H1A7 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
POLR2J3Q9H1A7 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
POLR2J3Q9H1A7 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
POLR2J3Q9H1A7 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
POLR2J3Q9H1A7 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC20.81■□□□□ 0.92
POLR2J3Q9H1A7 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC20.81■□□□□ 0.92
POLR2J3Q9H1A7 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC20.81■□□□□ 0.92
POLR2J3Q9H1A7 BHLHE23-202ENST00000612929 1109 ntBASIC20.81■□□□□ 0.92
POLR2J3Q9H1A7 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
POLR2J3Q9H1A7 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC20.81■□□□□ 0.92
POLR2J3Q9H1A7 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
POLR2J3Q9H1A7 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
POLR2J3Q9H1A7 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
POLR2J3Q9H1A7 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
POLR2J3Q9H1A7 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC20.8■□□□□ 0.92
POLR2J3Q9H1A7 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC20.8■□□□□ 0.92
POLR2J3Q9H1A7 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
POLR2J3Q9H1A7 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
POLR2J3Q9H1A7 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
POLR2J3Q9H1A7 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
POLR2J3Q9H1A7 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC20.8■□□□□ 0.92
POLR2J3Q9H1A7 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC20.8■□□□□ 0.92
POLR2J3Q9H1A7 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
POLR2J3Q9H1A7 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
POLR2J3Q9H1A7 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
POLR2J3Q9H1A7 ATP5G2P3-201ENST00000429083 425 ntBASIC20.79■□□□□ 0.92
POLR2J3Q9H1A7 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
POLR2J3Q9H1A7 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
POLR2J3Q9H1A7 THA1P-201ENST00000590384 1145 ntBASIC20.79■□□□□ 0.92
POLR2J3Q9H1A7 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
POLR2J3Q9H1A7 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC20.79■□□□□ 0.92
POLR2J3Q9H1A7 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
POLR2J3Q9H1A7 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
POLR2J3Q9H1A7 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC20.79■□□□□ 0.92
POLR2J3Q9H1A7 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
POLR2J3Q9H1A7 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
POLR2J3Q9H1A7 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
POLR2J3Q9H1A7 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
POLR2J3Q9H1A7 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
POLR2J3Q9H1A7 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
POLR2J3Q9H1A7 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
POLR2J3Q9H1A7 C1orf229-201ENST00000623686 2258 ntBASIC20.78■□□□□ 0.92
POLR2J3Q9H1A7 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
POLR2J3Q9H1A7 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
POLR2J3Q9H1A7 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC20.78■□□□□ 0.92
POLR2J3Q9H1A7 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
POLR2J3Q9H1A7 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
POLR2J3Q9H1A7 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC20.78■□□□□ 0.92
POLR2J3Q9H1A7 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
POLR2J3Q9H1A7 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
POLR2J3Q9H1A7 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC20.78■□□□□ 0.92
POLR2J3Q9H1A7 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
POLR2J3Q9H1A7 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
POLR2J3Q9H1A7 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
POLR2J3Q9H1A7 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
POLR2J3Q9H1A7 AC004987.1-201ENST00000428627 508 ntBASIC20.77■□□□□ 0.92
POLR2J3Q9H1A7 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC20.77■□□□□ 0.92
POLR2J3Q9H1A7 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC20.77■□□□□ 0.92
POLR2J3Q9H1A7 MIR4281-201ENST00000580852 62 ntBASIC20.77■□□□□ 0.92
POLR2J3Q9H1A7 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC20.77■□□□□ 0.92
POLR2J3Q9H1A7 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC20.77■□□□□ 0.92
POLR2J3Q9H1A7 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
POLR2J3Q9H1A7 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
POLR2J3Q9H1A7 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
POLR2J3Q9H1A7 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
POLR2J3Q9H1A7 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
POLR2J3Q9H1A7 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
POLR2J3Q9H1A7 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC20.76■□□□□ 0.91
POLR2J3Q9H1A7 EP400NL-214ENST00000641289 2402 ntBASIC20.76■□□□□ 0.91
POLR2J3Q9H1A7 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC20.76■□□□□ 0.91
POLR2J3Q9H1A7 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
POLR2J3Q9H1A7 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC20.76■□□□□ 0.91
POLR2J3Q9H1A7 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
POLR2J3Q9H1A7 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
POLR2J3Q9H1A7 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC20.76■□□□□ 0.91
POLR2J3Q9H1A7 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
POLR2J3Q9H1A7 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC20.76■□□□□ 0.91
POLR2J3Q9H1A7 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
POLR2J3Q9H1A7 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC20.76■□□□□ 0.91
POLR2J3Q9H1A7 AF131216.4-201ENST00000638924 1588 ntBASIC20.76■□□□□ 0.91
POLR2J3Q9H1A7 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC20.75■□□□□ 0.91
POLR2J3Q9H1A7 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC20.75■□□□□ 0.91
POLR2J3Q9H1A7 CLDN5-201ENST00000403084 2357 ntBASIC20.75■□□□□ 0.91
POLR2J3Q9H1A7 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
POLR2J3Q9H1A7 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
POLR2J3Q9H1A7 TSPY13P-201ENST00000338964 914 ntBASIC20.75■□□□□ 0.91
POLR2J3Q9H1A7 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC20.75■□□□□ 0.91
POLR2J3Q9H1A7 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
POLR2J3Q9H1A7 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
POLR2J3Q9H1A7 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC20.75■□□□□ 0.91
POLR2J3Q9H1A7 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
POLR2J3Q9H1A7 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
POLR2J3Q9H1A7 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
POLR2J3Q9H1A7 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
POLR2J3Q9H1A7 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC20.74■□□□□ 0.91
POLR2J3Q9H1A7 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC20.74■□□□□ 0.91
POLR2J3Q9H1A7 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
POLR2J3Q9H1A7 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
POLR2J3Q9H1A7 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms