Protein–RNA interactions for Protein: Q9BV87

CNPPD1, Protein CNPPD1, humanhuman

Predictions only

Length 410 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNPPD1Q9BV87 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
CNPPD1Q9BV87 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC21.32■■□□□ 1
CNPPD1Q9BV87 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CNPPD1Q9BV87 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CNPPD1Q9BV87 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
CNPPD1Q9BV87 REST-206ENST00000612429 1376 ntTSL 5 BASIC21.32■■□□□ 1
CNPPD1Q9BV87 REST-207ENST00000616975 1370 ntTSL 5 BASIC21.32■■□□□ 1
CNPPD1Q9BV87 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC21.32■■□□□ 1
CNPPD1Q9BV87 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CNPPD1Q9BV87 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
CNPPD1Q9BV87 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC21.31■■□□□ 1
CNPPD1Q9BV87 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
CNPPD1Q9BV87 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CNPPD1Q9BV87 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
CNPPD1Q9BV87 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC21.31■■□□□ 1
CNPPD1Q9BV87 CD72-202ENST00000378430 585 ntTSL 3 BASIC21.31■■□□□ 1
CNPPD1Q9BV87 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC21.31■■□□□ 1
CNPPD1Q9BV87 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC21.31■■□□□ 1
CNPPD1Q9BV87 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
CNPPD1Q9BV87 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
CNPPD1Q9BV87 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC21.31■■□□□ 1
CNPPD1Q9BV87 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC21.31■■□□□ 1
CNPPD1Q9BV87 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC21.31■■□□□ 1
CNPPD1Q9BV87 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
CNPPD1Q9BV87 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
CNPPD1Q9BV87 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CNPPD1Q9BV87 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
CNPPD1Q9BV87 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC21.3■■□□□ 1
CNPPD1Q9BV87 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CNPPD1Q9BV87 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC21.3■■□□□ 1
CNPPD1Q9BV87 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CNPPD1Q9BV87 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CNPPD1Q9BV87 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC21.3■■□□□ 1
CNPPD1Q9BV87 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CNPPD1Q9BV87 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
CNPPD1Q9BV87 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
CNPPD1Q9BV87 EXOG-217ENST00000630638 197 ntTSL 5 BASIC21.3■■□□□ 1
CNPPD1Q9BV87 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC21.3■■□□□ 1
CNPPD1Q9BV87 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC21.29■■□□□ 1
CNPPD1Q9BV87 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC21.29■■□□□ 1
CNPPD1Q9BV87 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
CNPPD1Q9BV87 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC21.29■■□□□ 1
CNPPD1Q9BV87 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC21.29■■□□□ 1
CNPPD1Q9BV87 LSM4-201ENST00000252816 986 ntTSL 2 BASIC21.29■■□□□ 1
CNPPD1Q9BV87 CLTA-206ENST00000466396 695 ntTSL 2 BASIC21.29■■□□□ 1
CNPPD1Q9BV87 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CNPPD1Q9BV87 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC21.29■■□□□ 1
CNPPD1Q9BV87 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC21.28■■□□□ 1
CNPPD1Q9BV87 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC21.28■■□□□ 1
CNPPD1Q9BV87 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CNPPD1Q9BV87 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC21.28■■□□□ 1
CNPPD1Q9BV87 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CNPPD1Q9BV87 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
CNPPD1Q9BV87 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC21.28■■□□□ 1
CNPPD1Q9BV87 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC21.28■■□□□ 1
CNPPD1Q9BV87 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CNPPD1Q9BV87 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
CNPPD1Q9BV87 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
CNPPD1Q9BV87 EI24-204ENST00000527235 1625 ntTSL 5 BASIC21.27■■□□□ 1
CNPPD1Q9BV87 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
CNPPD1Q9BV87 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC21.27■■□□□ 1
CNPPD1Q9BV87 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC21.27■■□□□ 1
CNPPD1Q9BV87 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC21.27■■□□□ 1
CNPPD1Q9BV87 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CNPPD1Q9BV87 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CNPPD1Q9BV87 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC21.27■■□□□ 1
CNPPD1Q9BV87 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC21.27■□□□□ 0.99
CNPPD1Q9BV87 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC21.27■□□□□ 0.99
CNPPD1Q9BV87 AC005703.6-201ENST00000623265 1329 ntBASIC21.27■□□□□ 0.99
CNPPD1Q9BV87 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC21.27■□□□□ 0.99
CNPPD1Q9BV87 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CNPPD1Q9BV87 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CNPPD1Q9BV87 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CNPPD1Q9BV87 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CNPPD1Q9BV87 MIR6724-1-201ENST00000616420 92 ntBASIC21.26■□□□□ 0.99
CNPPD1Q9BV87 MIR6724-2-201ENST00000616483 92 ntBASIC21.26■□□□□ 0.99
CNPPD1Q9BV87 MIR6724-4-201ENST00000617390 92 ntBASIC21.26■□□□□ 0.99
CNPPD1Q9BV87 MIR6724-3-201ENST00000622482 92 ntBASIC21.26■□□□□ 0.99
CNPPD1Q9BV87 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CNPPD1Q9BV87 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CNPPD1Q9BV87 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CNPPD1Q9BV87 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CNPPD1Q9BV87 TFPT-201ENST00000391757 774 ntTSL 5 BASIC21.25■□□□□ 0.99
CNPPD1Q9BV87 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
CNPPD1Q9BV87 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC21.25■□□□□ 0.99
CNPPD1Q9BV87 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CNPPD1Q9BV87 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
CNPPD1Q9BV87 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC21.25■□□□□ 0.99
CNPPD1Q9BV87 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC21.24■□□□□ 0.99
CNPPD1Q9BV87 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CNPPD1Q9BV87 EI24-213ENST00000618552 1747 ntTSL 5 BASIC21.24■□□□□ 0.99
CNPPD1Q9BV87 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC21.24■□□□□ 0.99
CNPPD1Q9BV87 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC21.24■□□□□ 0.99
CNPPD1Q9BV87 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CNPPD1Q9BV87 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CNPPD1Q9BV87 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC21.24■□□□□ 0.99
CNPPD1Q9BV87 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CNPPD1Q9BV87 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
CNPPD1Q9BV87 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC21.24■□□□□ 0.99
CNPPD1Q9BV87 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms