Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC22.15■■□□□ 1.14
PDLIM5Q96HC4 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC22.15■■□□□ 1.14
PDLIM5Q96HC4 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC22.15■■□□□ 1.14
PDLIM5Q96HC4 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC22.15■■□□□ 1.14
PDLIM5Q96HC4 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC22.15■■□□□ 1.14
PDLIM5Q96HC4 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
PDLIM5Q96HC4 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
PDLIM5Q96HC4 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC22.15■■□□□ 1.14
PDLIM5Q96HC4 AC092028.1-203ENST00000608262 953 ntBASIC22.15■■□□□ 1.14
PDLIM5Q96HC4 ME2-208ENST00000638937 2471 ntTSL 5 BASIC22.15■■□□□ 1.14
PDLIM5Q96HC4 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC22.14■■□□□ 1.14
PDLIM5Q96HC4 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC22.14■■□□□ 1.13
PDLIM5Q96HC4 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC22.14■■□□□ 1.13
PDLIM5Q96HC4 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
PDLIM5Q96HC4 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
PDLIM5Q96HC4 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
PDLIM5Q96HC4 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC22.14■■□□□ 1.13
PDLIM5Q96HC4 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
PDLIM5Q96HC4 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
PDLIM5Q96HC4 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC22.13■■□□□ 1.13
PDLIM5Q96HC4 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC22.13■■□□□ 1.13
PDLIM5Q96HC4 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC22.13■■□□□ 1.13
PDLIM5Q96HC4 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC22.13■■□□□ 1.13
PDLIM5Q96HC4 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
PDLIM5Q96HC4 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
PDLIM5Q96HC4 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
PDLIM5Q96HC4 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC22.12■■□□□ 1.13
PDLIM5Q96HC4 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC22.12■■□□□ 1.13
PDLIM5Q96HC4 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC22.12■■□□□ 1.13
PDLIM5Q96HC4 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC22.12■■□□□ 1.13
PDLIM5Q96HC4 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC22.12■■□□□ 1.13
PDLIM5Q96HC4 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC22.12■■□□□ 1.13
PDLIM5Q96HC4 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC22.12■■□□□ 1.13
PDLIM5Q96HC4 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC22.12■■□□□ 1.13
PDLIM5Q96HC4 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC22.12■■□□□ 1.13
PDLIM5Q96HC4 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
PDLIM5Q96HC4 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC22.12■■□□□ 1.13
PDLIM5Q96HC4 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
PDLIM5Q96HC4 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC22.12■■□□□ 1.13
PDLIM5Q96HC4 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC22.12■■□□□ 1.13
PDLIM5Q96HC4 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
PDLIM5Q96HC4 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC22.11■■□□□ 1.13
PDLIM5Q96HC4 AC005703.6-201ENST00000623265 1329 ntBASIC22.11■■□□□ 1.13
PDLIM5Q96HC4 AC079630.1-202ENST00000618127 1840 ntBASIC22.11■■□□□ 1.13
PDLIM5Q96HC4 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC22.11■■□□□ 1.13
PDLIM5Q96HC4 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC22.11■■□□□ 1.13
PDLIM5Q96HC4 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC22.11■■□□□ 1.13
PDLIM5Q96HC4 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC22.11■■□□□ 1.13
PDLIM5Q96HC4 KRT125P-201ENST00000546827 989 ntBASIC22.11■■□□□ 1.13
PDLIM5Q96HC4 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
PDLIM5Q96HC4 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC22.11■■□□□ 1.13
PDLIM5Q96HC4 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC22.11■■□□□ 1.13
PDLIM5Q96HC4 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC22.1■■□□□ 1.13
PDLIM5Q96HC4 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC22.1■■□□□ 1.13
PDLIM5Q96HC4 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC22.1■■□□□ 1.13
PDLIM5Q96HC4 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
PDLIM5Q96HC4 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC22.1■■□□□ 1.13
PDLIM5Q96HC4 CLTA-206ENST00000466396 695 ntTSL 2 BASIC22.1■■□□□ 1.13
PDLIM5Q96HC4 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC22.1■■□□□ 1.13
PDLIM5Q96HC4 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC22.1■■□□□ 1.13
PDLIM5Q96HC4 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
PDLIM5Q96HC4 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
PDLIM5Q96HC4 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC22.1■■□□□ 1.13
PDLIM5Q96HC4 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC22.1■■□□□ 1.13
PDLIM5Q96HC4 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
PDLIM5Q96HC4 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC22.09■■□□□ 1.13
PDLIM5Q96HC4 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
PDLIM5Q96HC4 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
PDLIM5Q96HC4 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
PDLIM5Q96HC4 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
PDLIM5Q96HC4 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
PDLIM5Q96HC4 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
PDLIM5Q96HC4 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC22.09■■□□□ 1.13
PDLIM5Q96HC4 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC22.09■■□□□ 1.13
PDLIM5Q96HC4 AC133561.1-201ENST00000568600 2415 ntBASIC22.09■■□□□ 1.13
PDLIM5Q96HC4 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC22.09■■□□□ 1.13
PDLIM5Q96HC4 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC22.08■■□□□ 1.13
PDLIM5Q96HC4 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC22.08■■□□□ 1.13
PDLIM5Q96HC4 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
PDLIM5Q96HC4 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC22.08■■□□□ 1.13
PDLIM5Q96HC4 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC22.08■■□□□ 1.13
PDLIM5Q96HC4 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
PDLIM5Q96HC4 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC22.08■■□□□ 1.13
PDLIM5Q96HC4 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
PDLIM5Q96HC4 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
PDLIM5Q96HC4 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC22.08■■□□□ 1.12
PDLIM5Q96HC4 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
PDLIM5Q96HC4 C9orf163-202ENST00000624034 2573 ntBASIC22.07■■□□□ 1.12
PDLIM5Q96HC4 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC22.07■■□□□ 1.12
PDLIM5Q96HC4 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
PDLIM5Q96HC4 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
PDLIM5Q96HC4 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
PDLIM5Q96HC4 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC22.07■■□□□ 1.12
PDLIM5Q96HC4 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC22.07■■□□□ 1.12
PDLIM5Q96HC4 AC009299.2-201ENST00000482477 511 ntBASIC22.07■■□□□ 1.12
PDLIM5Q96HC4 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC22.07■■□□□ 1.12
PDLIM5Q96HC4 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
PDLIM5Q96HC4 MIR4787-201ENST00000607364 84 ntBASIC22.07■■□□□ 1.12
PDLIM5Q96HC4 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
PDLIM5Q96HC4 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC22.07■■□□□ 1.12
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms