Protein–RNA interactions for Protein: Q96AA3

RFT1, Protein RFT1 homolog, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1Q96AA3 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RFT1Q96AA3 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
RFT1Q96AA3 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
RFT1Q96AA3 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
RFT1Q96AA3 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC19.89■□□□□ 0.77
RFT1Q96AA3 RPS2P7-201ENST00000447334 885 ntBASIC19.89■□□□□ 0.77
RFT1Q96AA3 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC19.89■□□□□ 0.77
RFT1Q96AA3 TERT-206ENST00000508104 2486 ntTSL 5 BASIC19.88■□□□□ 0.77
RFT1Q96AA3 AC007375.3-201ENST00000600936 2314 ntBASIC19.88■□□□□ 0.77
RFT1Q96AA3 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RFT1Q96AA3 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
RFT1Q96AA3 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RFT1Q96AA3 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
RFT1Q96AA3 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
RFT1Q96AA3 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
RFT1Q96AA3 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RFT1Q96AA3 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RFT1Q96AA3 LSR-203ENST00000360798 1963 ntTSL 2 BASIC19.88■□□□□ 0.77
RFT1Q96AA3 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
RFT1Q96AA3 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
RFT1Q96AA3 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC19.87■□□□□ 0.77
RFT1Q96AA3 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC19.87■□□□□ 0.77
RFT1Q96AA3 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RFT1Q96AA3 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
RFT1Q96AA3 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
RFT1Q96AA3 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RFT1Q96AA3 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RFT1Q96AA3 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RFT1Q96AA3 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
RFT1Q96AA3 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RFT1Q96AA3 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC19.87■□□□□ 0.77
RFT1Q96AA3 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RFT1Q96AA3 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
RFT1Q96AA3 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
RFT1Q96AA3 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC19.86■□□□□ 0.77
RFT1Q96AA3 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
RFT1Q96AA3 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC19.86■□□□□ 0.77
RFT1Q96AA3 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
RFT1Q96AA3 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
RFT1Q96AA3 ANOS2P-203ENST00000472227 1816 ntBASIC19.86■□□□□ 0.77
RFT1Q96AA3 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC19.86■□□□□ 0.77
RFT1Q96AA3 DUX4L9-201ENST00000449051 1259 ntBASIC19.86■□□□□ 0.77
RFT1Q96AA3 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
RFT1Q96AA3 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RFT1Q96AA3 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RFT1Q96AA3 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RFT1Q96AA3 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RFT1Q96AA3 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC19.86■□□□□ 0.77
RFT1Q96AA3 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
RFT1Q96AA3 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
RFT1Q96AA3 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RFT1Q96AA3 DUSP8P3-201ENST00000399571 1760 ntBASIC19.85■□□□□ 0.77
RFT1Q96AA3 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
RFT1Q96AA3 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC19.85■□□□□ 0.77
RFT1Q96AA3 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RFT1Q96AA3 RARRES2P2-201ENST00000394842 485 ntBASIC19.85■□□□□ 0.77
RFT1Q96AA3 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
RFT1Q96AA3 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC19.85■□□□□ 0.77
RFT1Q96AA3 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
RFT1Q96AA3 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RFT1Q96AA3 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC19.85■□□□□ 0.77
RFT1Q96AA3 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC19.85■□□□□ 0.77
RFT1Q96AA3 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RFT1Q96AA3 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC19.84■□□□□ 0.77
RFT1Q96AA3 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
RFT1Q96AA3 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
RFT1Q96AA3 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC19.84■□□□□ 0.77
RFT1Q96AA3 MIR6765-201ENST00000614092 87 ntBASIC19.84■□□□□ 0.77
RFT1Q96AA3 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC19.84■□□□□ 0.77
RFT1Q96AA3 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC19.84■□□□□ 0.77
RFT1Q96AA3 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC19.84■□□□□ 0.77
RFT1Q96AA3 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC19.84■□□□□ 0.77
RFT1Q96AA3 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
RFT1Q96AA3 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
RFT1Q96AA3 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
RFT1Q96AA3 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC19.83■□□□□ 0.77
RFT1Q96AA3 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC19.83■□□□□ 0.76
RFT1Q96AA3 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
RFT1Q96AA3 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC19.82■□□□□ 0.76
RFT1Q96AA3 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RFT1Q96AA3 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RFT1Q96AA3 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RFT1Q96AA3 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RFT1Q96AA3 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RFT1Q96AA3 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC19.82■□□□□ 0.76
RFT1Q96AA3 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RFT1Q96AA3 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC19.82■□□□□ 0.76
RFT1Q96AA3 U85056.1-201ENST00000616429 682 ntBASIC19.82■□□□□ 0.76
RFT1Q96AA3 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RFT1Q96AA3 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RFT1Q96AA3 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RFT1Q96AA3 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
RFT1Q96AA3 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC19.81■□□□□ 0.76
RFT1Q96AA3 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
RFT1Q96AA3 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
RFT1Q96AA3 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
RFT1Q96AA3 HSD17B1P1-201ENST00000590052 955 ntBASIC19.81■□□□□ 0.76
RFT1Q96AA3 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RFT1Q96AA3 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC19.81■□□□□ 0.76
RFT1Q96AA3 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 94.6 ms