Protein–RNA interactions for Protein: Q8IWY4

SCUBE1, Signal peptide, CUB and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE1Q8IWY4 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
SCUBE1Q8IWY4 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
SCUBE1Q8IWY4 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC22.23■■□□□ 1.15
SCUBE1Q8IWY4 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC22.23■■□□□ 1.15
SCUBE1Q8IWY4 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC22.23■■□□□ 1.15
SCUBE1Q8IWY4 MIR4508-201ENST00000584178 70 ntBASIC22.23■■□□□ 1.15
SCUBE1Q8IWY4 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC22.23■■□□□ 1.15
SCUBE1Q8IWY4 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
SCUBE1Q8IWY4 AL024507.2-201ENST00000606070 2574 ntBASIC22.23■■□□□ 1.15
SCUBE1Q8IWY4 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
SCUBE1Q8IWY4 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC22.23■■□□□ 1.15
SCUBE1Q8IWY4 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
SCUBE1Q8IWY4 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
SCUBE1Q8IWY4 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
SCUBE1Q8IWY4 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC22.22■■□□□ 1.15
SCUBE1Q8IWY4 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
SCUBE1Q8IWY4 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC22.22■■□□□ 1.15
SCUBE1Q8IWY4 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
SCUBE1Q8IWY4 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC22.21■■□□□ 1.15
SCUBE1Q8IWY4 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
SCUBE1Q8IWY4 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC22.21■■□□□ 1.15
SCUBE1Q8IWY4 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC22.21■■□□□ 1.15
SCUBE1Q8IWY4 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC22.21■■□□□ 1.15
SCUBE1Q8IWY4 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
SCUBE1Q8IWY4 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC22.21■■□□□ 1.15
SCUBE1Q8IWY4 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
SCUBE1Q8IWY4 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC22.21■■□□□ 1.15
SCUBE1Q8IWY4 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC22.21■■□□□ 1.15
SCUBE1Q8IWY4 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.15
SCUBE1Q8IWY4 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC22.2■■□□□ 1.15
SCUBE1Q8IWY4 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
SCUBE1Q8IWY4 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
SCUBE1Q8IWY4 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC22.2■■□□□ 1.14
SCUBE1Q8IWY4 FOXO3B-201ENST00000395675 1928 ntBASIC22.2■■□□□ 1.14
SCUBE1Q8IWY4 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC22.2■■□□□ 1.14
SCUBE1Q8IWY4 GUSBP5-202ENST00000510805 1989 ntBASIC22.2■■□□□ 1.14
SCUBE1Q8IWY4 AL592295.1-201ENST00000400984 884 ntBASIC22.2■■□□□ 1.14
SCUBE1Q8IWY4 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC22.2■■□□□ 1.14
SCUBE1Q8IWY4 AC022616.5-201ENST00000518796 181 ntBASIC22.2■■□□□ 1.14
SCUBE1Q8IWY4 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC22.2■■□□□ 1.14
SCUBE1Q8IWY4 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC22.2■■□□□ 1.14
SCUBE1Q8IWY4 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC22.2■■□□□ 1.14
SCUBE1Q8IWY4 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC22.2■■□□□ 1.14
SCUBE1Q8IWY4 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC22.2■■□□□ 1.14
SCUBE1Q8IWY4 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
SCUBE1Q8IWY4 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
SCUBE1Q8IWY4 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC22.19■■□□□ 1.14
SCUBE1Q8IWY4 TERT-206ENST00000508104 2486 ntTSL 5 BASIC22.19■■□□□ 1.14
SCUBE1Q8IWY4 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
SCUBE1Q8IWY4 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC22.19■■□□□ 1.14
SCUBE1Q8IWY4 RARRES2P1-201ENST00000474487 481 ntBASIC22.19■■□□□ 1.14
SCUBE1Q8IWY4 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC22.19■■□□□ 1.14
SCUBE1Q8IWY4 KRT8P33-201ENST00000508125 1423 ntBASIC22.19■■□□□ 1.14
SCUBE1Q8IWY4 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC22.19■■□□□ 1.14
SCUBE1Q8IWY4 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC22.19■■□□□ 1.14
SCUBE1Q8IWY4 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC22.19■■□□□ 1.14
SCUBE1Q8IWY4 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
SCUBE1Q8IWY4 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC22.19■■□□□ 1.14
SCUBE1Q8IWY4 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC22.18■■□□□ 1.14
SCUBE1Q8IWY4 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
SCUBE1Q8IWY4 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
SCUBE1Q8IWY4 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC22.18■■□□□ 1.14
SCUBE1Q8IWY4 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
SCUBE1Q8IWY4 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC22.18■■□□□ 1.14
SCUBE1Q8IWY4 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC22.18■■□□□ 1.14
SCUBE1Q8IWY4 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
SCUBE1Q8IWY4 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC22.18■■□□□ 1.14
SCUBE1Q8IWY4 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC22.18■■□□□ 1.14
SCUBE1Q8IWY4 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC22.18■■□□□ 1.14
SCUBE1Q8IWY4 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
SCUBE1Q8IWY4 WWC2-AS2-201ENST00000578387 2183 ntBASIC22.18■■□□□ 1.14
SCUBE1Q8IWY4 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
SCUBE1Q8IWY4 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC22.17■■□□□ 1.14
SCUBE1Q8IWY4 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
SCUBE1Q8IWY4 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC22.17■■□□□ 1.14
SCUBE1Q8IWY4 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC22.17■■□□□ 1.14
SCUBE1Q8IWY4 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
SCUBE1Q8IWY4 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
SCUBE1Q8IWY4 YBX1P4-201ENST00000392794 808 ntBASIC22.17■■□□□ 1.14
SCUBE1Q8IWY4 ANOS2P-203ENST00000472227 1816 ntBASIC22.17■■□□□ 1.14
SCUBE1Q8IWY4 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
SCUBE1Q8IWY4 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
SCUBE1Q8IWY4 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC22.16■■□□□ 1.14
SCUBE1Q8IWY4 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
SCUBE1Q8IWY4 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC22.16■■□□□ 1.14
SCUBE1Q8IWY4 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
SCUBE1Q8IWY4 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC22.16■■□□□ 1.14
SCUBE1Q8IWY4 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
SCUBE1Q8IWY4 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC22.16■■□□□ 1.14
SCUBE1Q8IWY4 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
SCUBE1Q8IWY4 LSR-203ENST00000360798 1963 ntTSL 2 BASIC22.16■■□□□ 1.14
SCUBE1Q8IWY4 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC22.15■■□□□ 1.14
SCUBE1Q8IWY4 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
SCUBE1Q8IWY4 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
SCUBE1Q8IWY4 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC22.15■■□□□ 1.14
SCUBE1Q8IWY4 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
SCUBE1Q8IWY4 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC22.15■■□□□ 1.14
SCUBE1Q8IWY4 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC22.15■■□□□ 1.14
SCUBE1Q8IWY4 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
SCUBE1Q8IWY4 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC22.15■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms