Protein–RNA interactions for Protein: Q86UE6

LRRTM1, Leucine-rich repeat transmembrane neuronal protein 1, humanhuman

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1Q86UE6 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
LRRTM1Q86UE6 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC19.61■□□□□ 0.73
LRRTM1Q86UE6 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
LRRTM1Q86UE6 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC19.61■□□□□ 0.73
LRRTM1Q86UE6 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
LRRTM1Q86UE6 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
LRRTM1Q86UE6 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
LRRTM1Q86UE6 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
LRRTM1Q86UE6 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
LRRTM1Q86UE6 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC19.61■□□□□ 0.73
LRRTM1Q86UE6 AC018755.3-202ENST00000596210 929 ntBASIC19.61■□□□□ 0.73
LRRTM1Q86UE6 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC19.61■□□□□ 0.73
LRRTM1Q86UE6 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC19.61■□□□□ 0.73
LRRTM1Q86UE6 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
LRRTM1Q86UE6 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
LRRTM1Q86UE6 AC131274.2-201ENST00000580697 1507 ntBASIC19.61■□□□□ 0.73
LRRTM1Q86UE6 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
LRRTM1Q86UE6 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
LRRTM1Q86UE6 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
LRRTM1Q86UE6 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
LRRTM1Q86UE6 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC19.6■□□□□ 0.73
LRRTM1Q86UE6 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
LRRTM1Q86UE6 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
LRRTM1Q86UE6 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
LRRTM1Q86UE6 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
LRRTM1Q86UE6 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
LRRTM1Q86UE6 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
LRRTM1Q86UE6 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
LRRTM1Q86UE6 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
LRRTM1Q86UE6 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
LRRTM1Q86UE6 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
LRRTM1Q86UE6 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
LRRTM1Q86UE6 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
LRRTM1Q86UE6 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
LRRTM1Q86UE6 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
LRRTM1Q86UE6 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
LRRTM1Q86UE6 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
LRRTM1Q86UE6 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
LRRTM1Q86UE6 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC19.58■□□□□ 0.73
LRRTM1Q86UE6 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC19.58■□□□□ 0.73
LRRTM1Q86UE6 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
LRRTM1Q86UE6 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC19.58■□□□□ 0.73
LRRTM1Q86UE6 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC19.58■□□□□ 0.73
LRRTM1Q86UE6 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.72
LRRTM1Q86UE6 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
LRRTM1Q86UE6 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC19.58■□□□□ 0.72
LRRTM1Q86UE6 WWC2-AS2-201ENST00000578387 2183 ntBASIC19.58■□□□□ 0.72
LRRTM1Q86UE6 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC19.58■□□□□ 0.72
LRRTM1Q86UE6 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
LRRTM1Q86UE6 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
LRRTM1Q86UE6 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
LRRTM1Q86UE6 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
LRRTM1Q86UE6 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC19.58■□□□□ 0.72
LRRTM1Q86UE6 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC19.58■□□□□ 0.72
LRRTM1Q86UE6 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
LRRTM1Q86UE6 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
LRRTM1Q86UE6 ESRRAP2-201ENST00000418437 1549 ntBASIC19.57■□□□□ 0.72
LRRTM1Q86UE6 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC19.57■□□□□ 0.72
LRRTM1Q86UE6 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC19.57■□□□□ 0.72
LRRTM1Q86UE6 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC19.57■□□□□ 0.72
LRRTM1Q86UE6 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
LRRTM1Q86UE6 IDNK-203ENST00000405990 629 ntTSL 2 BASIC19.57■□□□□ 0.72
LRRTM1Q86UE6 AL592293.1-201ENST00000502889 1188 ntBASIC19.57■□□□□ 0.72
LRRTM1Q86UE6 AC242852.2-201ENST00000615738 1807 ntBASIC19.57■□□□□ 0.72
LRRTM1Q86UE6 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
LRRTM1Q86UE6 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC19.57■□□□□ 0.72
LRRTM1Q86UE6 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
LRRTM1Q86UE6 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
LRRTM1Q86UE6 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
LRRTM1Q86UE6 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
LRRTM1Q86UE6 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
LRRTM1Q86UE6 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
LRRTM1Q86UE6 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
LRRTM1Q86UE6 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
LRRTM1Q86UE6 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
LRRTM1Q86UE6 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC19.56■□□□□ 0.72
LRRTM1Q86UE6 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
LRRTM1Q86UE6 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC19.56■□□□□ 0.72
LRRTM1Q86UE6 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC19.56■□□□□ 0.72
LRRTM1Q86UE6 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
LRRTM1Q86UE6 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
LRRTM1Q86UE6 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
LRRTM1Q86UE6 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
LRRTM1Q86UE6 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
LRRTM1Q86UE6 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC19.55■□□□□ 0.72
LRRTM1Q86UE6 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC19.55■□□□□ 0.72
LRRTM1Q86UE6 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
LRRTM1Q86UE6 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
LRRTM1Q86UE6 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
LRRTM1Q86UE6 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
LRRTM1Q86UE6 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
LRRTM1Q86UE6 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC19.54■□□□□ 0.72
LRRTM1Q86UE6 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC19.54■□□□□ 0.72
LRRTM1Q86UE6 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
LRRTM1Q86UE6 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
LRRTM1Q86UE6 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
LRRTM1Q86UE6 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
LRRTM1Q86UE6 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
LRRTM1Q86UE6 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
LRRTM1Q86UE6 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC19.53■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms