Protein–RNA interactions for Protein: Q86TM6

SYVN1, E3 ubiquitin-protein ligase synoviolin, humanhuman

Predictions only

Length 617 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYVN1Q86TM6 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC22.18■■□□□ 1.14
SYVN1Q86TM6 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
SYVN1Q86TM6 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC22.18■■□□□ 1.14
SYVN1Q86TM6 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
SYVN1Q86TM6 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC22.18■■□□□ 1.14
SYVN1Q86TM6 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
SYVN1Q86TM6 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC22.18■■□□□ 1.14
SYVN1Q86TM6 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC22.18■■□□□ 1.14
SYVN1Q86TM6 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
SYVN1Q86TM6 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
SYVN1Q86TM6 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
SYVN1Q86TM6 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC22.17■■□□□ 1.14
SYVN1Q86TM6 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC22.17■■□□□ 1.14
SYVN1Q86TM6 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC22.17■■□□□ 1.14
SYVN1Q86TM6 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
SYVN1Q86TM6 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC22.17■■□□□ 1.14
SYVN1Q86TM6 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC22.17■■□□□ 1.14
SYVN1Q86TM6 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC22.17■■□□□ 1.14
SYVN1Q86TM6 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC22.17■■□□□ 1.14
SYVN1Q86TM6 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
SYVN1Q86TM6 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC22.17■■□□□ 1.14
SYVN1Q86TM6 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC22.16■■□□□ 1.14
SYVN1Q86TM6 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC22.16■■□□□ 1.14
SYVN1Q86TM6 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
SYVN1Q86TM6 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC22.16■■□□□ 1.14
SYVN1Q86TM6 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC22.16■■□□□ 1.14
SYVN1Q86TM6 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
SYVN1Q86TM6 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
SYVN1Q86TM6 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC22.16■■□□□ 1.14
SYVN1Q86TM6 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC22.15■■□□□ 1.14
SYVN1Q86TM6 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
SYVN1Q86TM6 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
SYVN1Q86TM6 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
SYVN1Q86TM6 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC22.15■■□□□ 1.14
SYVN1Q86TM6 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
SYVN1Q86TM6 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC22.15■■□□□ 1.14
SYVN1Q86TM6 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
SYVN1Q86TM6 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
SYVN1Q86TM6 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC22.15■■□□□ 1.14
SYVN1Q86TM6 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC22.15■■□□□ 1.14
SYVN1Q86TM6 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
SYVN1Q86TM6 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC22.14■■□□□ 1.14
SYVN1Q86TM6 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC22.14■■□□□ 1.14
SYVN1Q86TM6 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
SYVN1Q86TM6 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
SYVN1Q86TM6 AC010997.5-201ENST00000609182 354 ntBASIC22.14■■□□□ 1.13
SYVN1Q86TM6 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC22.14■■□□□ 1.13
SYVN1Q86TM6 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
SYVN1Q86TM6 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC22.14■■□□□ 1.13
SYVN1Q86TM6 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
SYVN1Q86TM6 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
SYVN1Q86TM6 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
SYVN1Q86TM6 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC22.13■■□□□ 1.13
SYVN1Q86TM6 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC22.13■■□□□ 1.13
SYVN1Q86TM6 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
SYVN1Q86TM6 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
SYVN1Q86TM6 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
SYVN1Q86TM6 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC22.13■■□□□ 1.13
SYVN1Q86TM6 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC22.12■■□□□ 1.13
SYVN1Q86TM6 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC22.12■■□□□ 1.13
SYVN1Q86TM6 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC22.12■■□□□ 1.13
SYVN1Q86TM6 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC22.12■■□□□ 1.13
SYVN1Q86TM6 MTDHP2-201ENST00000601468 714 ntBASIC22.12■■□□□ 1.13
SYVN1Q86TM6 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC22.12■■□□□ 1.13
SYVN1Q86TM6 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC22.12■■□□□ 1.13
SYVN1Q86TM6 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC22.12■■□□□ 1.13
SYVN1Q86TM6 EI24-204ENST00000527235 1625 ntTSL 5 BASIC22.12■■□□□ 1.13
SYVN1Q86TM6 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
SYVN1Q86TM6 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC22.11■■□□□ 1.13
SYVN1Q86TM6 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
SYVN1Q86TM6 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC22.11■■□□□ 1.13
SYVN1Q86TM6 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC22.11■■□□□ 1.13
SYVN1Q86TM6 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
SYVN1Q86TM6 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC22.11■■□□□ 1.13
SYVN1Q86TM6 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC22.11■■□□□ 1.13
SYVN1Q86TM6 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC22.11■■□□□ 1.13
SYVN1Q86TM6 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
SYVN1Q86TM6 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
SYVN1Q86TM6 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
SYVN1Q86TM6 AC092068.2-201ENST00000590491 1708 ntBASIC22.11■■□□□ 1.13
SYVN1Q86TM6 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
SYVN1Q86TM6 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
SYVN1Q86TM6 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
SYVN1Q86TM6 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
SYVN1Q86TM6 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC22.1■■□□□ 1.13
SYVN1Q86TM6 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC22.1■■□□□ 1.13
SYVN1Q86TM6 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC22.1■■□□□ 1.13
SYVN1Q86TM6 ALDH1A3-203ENST00000557963 1670 ntBASIC22.1■■□□□ 1.13
SYVN1Q86TM6 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC22.1■■□□□ 1.13
SYVN1Q86TM6 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC22.1■■□□□ 1.13
SYVN1Q86TM6 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC22.1■■□□□ 1.13
SYVN1Q86TM6 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC22.09■■□□□ 1.13
SYVN1Q86TM6 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC22.09■■□□□ 1.13
SYVN1Q86TM6 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
SYVN1Q86TM6 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC22.09■■□□□ 1.13
SYVN1Q86TM6 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC22.09■■□□□ 1.13
SYVN1Q86TM6 TK2-202ENST00000417693 1046 ntTSL 2 BASIC22.09■■□□□ 1.13
SYVN1Q86TM6 RPP21-222ENST00000433076 577 ntTSL 2 BASIC22.09■■□□□ 1.13
SYVN1Q86TM6 STK32C-205ENST00000456004 607 ntTSL 2 BASIC22.09■■□□□ 1.13
SYVN1Q86TM6 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC22.09■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 91.4 ms