Protein–RNA interactions for Protein: P48764

SLC9A3, Sodium/hydrogen exchanger 3, humanhuman

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC9A3P48764 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SLC9A3P48764 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SLC9A3P48764 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SLC9A3P48764 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SLC9A3P48764 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC20.59■□□□□ 0.89
SLC9A3P48764 ALDH1A3-203ENST00000557963 1670 ntBASIC20.59■□□□□ 0.89
SLC9A3P48764 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SLC9A3P48764 LBH-205ENST00000407930 756 ntTSL 2 BASIC20.59■□□□□ 0.89
SLC9A3P48764 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC20.59■□□□□ 0.89
SLC9A3P48764 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SLC9A3P48764 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC20.59■□□□□ 0.89
SLC9A3P48764 AC120024.1-201ENST00000562672 995 ntBASIC20.59■□□□□ 0.89
SLC9A3P48764 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC20.59■□□□□ 0.89
SLC9A3P48764 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
SLC9A3P48764 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
SLC9A3P48764 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
SLC9A3P48764 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
SLC9A3P48764 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC20.58■□□□□ 0.89
SLC9A3P48764 KRT18P24-201ENST00000344739 1156 ntBASIC20.58■□□□□ 0.89
SLC9A3P48764 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
SLC9A3P48764 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC20.58■□□□□ 0.88
SLC9A3P48764 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
SLC9A3P48764 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
SLC9A3P48764 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
SLC9A3P48764 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
SLC9A3P48764 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
SLC9A3P48764 EI24-204ENST00000527235 1625 ntTSL 5 BASIC20.57■□□□□ 0.88
SLC9A3P48764 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SLC9A3P48764 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SLC9A3P48764 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SLC9A3P48764 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
SLC9A3P48764 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC20.57■□□□□ 0.88
SLC9A3P48764 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC20.57■□□□□ 0.88
SLC9A3P48764 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SLC9A3P48764 AC233723.2-201ENST00000623798 2106 ntBASIC20.57■□□□□ 0.88
SLC9A3P48764 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SLC9A3P48764 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
SLC9A3P48764 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SLC9A3P48764 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
SLC9A3P48764 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SLC9A3P48764 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SLC9A3P48764 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
SLC9A3P48764 TSPY13P-201ENST00000338964 914 ntBASIC20.56■□□□□ 0.88
SLC9A3P48764 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC20.56■□□□□ 0.88
SLC9A3P48764 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SLC9A3P48764 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
SLC9A3P48764 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SLC9A3P48764 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC20.56■□□□□ 0.88
SLC9A3P48764 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SLC9A3P48764 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SLC9A3P48764 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SLC9A3P48764 THA1P-201ENST00000590384 1145 ntBASIC20.55■□□□□ 0.88
SLC9A3P48764 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC20.55■□□□□ 0.88
SLC9A3P48764 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
SLC9A3P48764 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC20.55■□□□□ 0.88
SLC9A3P48764 LINC00565-201ENST00000562710 2331 ntBASIC20.55■□□□□ 0.88
SLC9A3P48764 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SLC9A3P48764 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SLC9A3P48764 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SLC9A3P48764 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC20.54■□□□□ 0.88
SLC9A3P48764 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC20.54■□□□□ 0.88
SLC9A3P48764 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC20.54■□□□□ 0.88
SLC9A3P48764 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
SLC9A3P48764 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SLC9A3P48764 EP400NL-214ENST00000641289 2402 ntBASIC20.54■□□□□ 0.88
SLC9A3P48764 DUSP8P3-201ENST00000399571 1760 ntBASIC20.54■□□□□ 0.88
SLC9A3P48764 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
SLC9A3P48764 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SLC9A3P48764 STK25-234ENST00000535007 2459 ntTSL 2 BASIC20.53■□□□□ 0.88
SLC9A3P48764 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SLC9A3P48764 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SLC9A3P48764 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SLC9A3P48764 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SLC9A3P48764 MIR4281-201ENST00000580852 62 ntBASIC20.53■□□□□ 0.88
SLC9A3P48764 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SLC9A3P48764 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC20.53■□□□□ 0.88
SLC9A3P48764 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SLC9A3P48764 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SLC9A3P48764 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SLC9A3P48764 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
SLC9A3P48764 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SLC9A3P48764 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC20.52■□□□□ 0.88
SLC9A3P48764 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SLC9A3P48764 PVT1_1.1-201ENST00000615125 194 ntBASIC20.52■□□□□ 0.88
SLC9A3P48764 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC20.52■□□□□ 0.88
SLC9A3P48764 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
SLC9A3P48764 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
SLC9A3P48764 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC20.52■□□□□ 0.88
SLC9A3P48764 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC20.52■□□□□ 0.87
SLC9A3P48764 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.87
SLC9A3P48764 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC20.52■□□□□ 0.87
SLC9A3P48764 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
SLC9A3P48764 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
SLC9A3P48764 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SLC9A3P48764 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
SLC9A3P48764 AF131216.4-201ENST00000638924 1588 ntBASIC20.51■□□□□ 0.87
SLC9A3P48764 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SLC9A3P48764 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SLC9A3P48764 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SLC9A3P48764 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC20.51■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 76.9 ms