Protein–RNA interactions for Protein: P48065

SLC6A12, Sodium- and chloride-dependent betaine transporter, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A12P48065 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
SLC6A12P48065 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
SLC6A12P48065 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
SLC6A12P48065 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
SLC6A12P48065 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC21.91■■□□□ 1.1
SLC6A12P48065 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
SLC6A12P48065 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
SLC6A12P48065 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC21.91■■□□□ 1.1
SLC6A12P48065 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
SLC6A12P48065 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
SLC6A12P48065 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
SLC6A12P48065 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
SLC6A12P48065 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
SLC6A12P48065 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC21.9■■□□□ 1.1
SLC6A12P48065 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
SLC6A12P48065 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
SLC6A12P48065 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC21.89■■□□□ 1.1
SLC6A12P48065 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
SLC6A12P48065 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
SLC6A12P48065 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
SLC6A12P48065 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
SLC6A12P48065 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
SLC6A12P48065 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC21.89■■□□□ 1.09
SLC6A12P48065 AC068473.5-201ENST00000616428 2072 ntBASIC21.89■■□□□ 1.09
SLC6A12P48065 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
SLC6A12P48065 ME2-208ENST00000638937 2471 ntTSL 5 BASIC21.88■■□□□ 1.09
SLC6A12P48065 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
SLC6A12P48065 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
SLC6A12P48065 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
SLC6A12P48065 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
SLC6A12P48065 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
SLC6A12P48065 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
SLC6A12P48065 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC21.88■■□□□ 1.09
SLC6A12P48065 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC21.88■■□□□ 1.09
SLC6A12P48065 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC21.88■■□□□ 1.09
SLC6A12P48065 AC079630.1-202ENST00000618127 1840 ntBASIC21.87■■□□□ 1.09
SLC6A12P48065 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC21.87■■□□□ 1.09
SLC6A12P48065 AC005703.6-201ENST00000623265 1329 ntBASIC21.87■■□□□ 1.09
SLC6A12P48065 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC21.87■■□□□ 1.09
SLC6A12P48065 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC21.87■■□□□ 1.09
SLC6A12P48065 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC21.87■■□□□ 1.09
SLC6A12P48065 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC21.87■■□□□ 1.09
SLC6A12P48065 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
SLC6A12P48065 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC21.87■■□□□ 1.09
SLC6A12P48065 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC21.87■■□□□ 1.09
SLC6A12P48065 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
SLC6A12P48065 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
SLC6A12P48065 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
SLC6A12P48065 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
SLC6A12P48065 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC21.86■■□□□ 1.09
SLC6A12P48065 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
SLC6A12P48065 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC21.86■■□□□ 1.09
SLC6A12P48065 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
SLC6A12P48065 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC21.85■■□□□ 1.09
SLC6A12P48065 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
SLC6A12P48065 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
SLC6A12P48065 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
SLC6A12P48065 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
SLC6A12P48065 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
SLC6A12P48065 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC21.85■■□□□ 1.09
SLC6A12P48065 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
SLC6A12P48065 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC21.84■■□□□ 1.09
SLC6A12P48065 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
SLC6A12P48065 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC21.84■■□□□ 1.09
SLC6A12P48065 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC21.84■■□□□ 1.09
SLC6A12P48065 MTDHP2-201ENST00000601468 714 ntBASIC21.84■■□□□ 1.09
SLC6A12P48065 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
SLC6A12P48065 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC21.84■■□□□ 1.09
SLC6A12P48065 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC21.83■■□□□ 1.09
SLC6A12P48065 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
SLC6A12P48065 C9orf163-202ENST00000624034 2573 ntBASIC21.83■■□□□ 1.09
SLC6A12P48065 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
SLC6A12P48065 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC21.83■■□□□ 1.09
SLC6A12P48065 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
SLC6A12P48065 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
SLC6A12P48065 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC21.83■■□□□ 1.08
SLC6A12P48065 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC21.83■■□□□ 1.08
SLC6A12P48065 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
SLC6A12P48065 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
SLC6A12P48065 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SLC6A12P48065 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SLC6A12P48065 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SLC6A12P48065 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
SLC6A12P48065 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC21.82■■□□□ 1.08
SLC6A12P48065 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC21.82■■□□□ 1.08
SLC6A12P48065 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SLC6A12P48065 AL035685.1-201ENST00000636663 812 ntBASIC21.82■■□□□ 1.08
SLC6A12P48065 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SLC6A12P48065 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
SLC6A12P48065 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
SLC6A12P48065 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC21.82■■□□□ 1.08
SLC6A12P48065 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
SLC6A12P48065 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC21.82■■□□□ 1.08
SLC6A12P48065 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
SLC6A12P48065 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC21.81■■□□□ 1.08
SLC6A12P48065 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC21.81■■□□□ 1.08
SLC6A12P48065 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
SLC6A12P48065 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SLC6A12P48065 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC21.81■■□□□ 1.08
SLC6A12P48065 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 12.4 ms