Protein–RNA interactions for Protein: Q9NWS1

PARPBP, PCNA-interacting partner, humanhuman

Predictions only

Length 579 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PARPBPQ9NWS1 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC20.21■□□□□ 0.83
PARPBPQ9NWS1 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
PARPBPQ9NWS1 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PARPBPQ9NWS1 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
PARPBPQ9NWS1 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PARPBPQ9NWS1 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PARPBPQ9NWS1 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
PARPBPQ9NWS1 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
PARPBPQ9NWS1 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC20.21■□□□□ 0.83
PARPBPQ9NWS1 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC20.21■□□□□ 0.83
PARPBPQ9NWS1 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
PARPBPQ9NWS1 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PARPBPQ9NWS1 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
PARPBPQ9NWS1 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC20.2■□□□□ 0.82
PARPBPQ9NWS1 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PARPBPQ9NWS1 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PARPBPQ9NWS1 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
PARPBPQ9NWS1 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PARPBPQ9NWS1 AL356740.2-201ENST00000601559 647 ntBASIC20.2■□□□□ 0.82
PARPBPQ9NWS1 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
PARPBPQ9NWS1 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PARPBPQ9NWS1 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
PARPBPQ9NWS1 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PARPBPQ9NWS1 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
PARPBPQ9NWS1 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC20.19■□□□□ 0.82
PARPBPQ9NWS1 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
PARPBPQ9NWS1 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
PARPBPQ9NWS1 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
PARPBPQ9NWS1 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
PARPBPQ9NWS1 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC20.19■□□□□ 0.82
PARPBPQ9NWS1 EI24-204ENST00000527235 1625 ntTSL 5 BASIC20.19■□□□□ 0.82
PARPBPQ9NWS1 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
PARPBPQ9NWS1 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PARPBPQ9NWS1 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PARPBPQ9NWS1 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
PARPBPQ9NWS1 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC20.18■□□□□ 0.82
PARPBPQ9NWS1 AK3-203ENST00000447596 705 ntTSL 2 BASIC20.18■□□□□ 0.82
PARPBPQ9NWS1 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC20.18■□□□□ 0.82
PARPBPQ9NWS1 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC20.18■□□□□ 0.82
PARPBPQ9NWS1 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PARPBPQ9NWS1 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC20.18■□□□□ 0.82
PARPBPQ9NWS1 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC20.18■□□□□ 0.82
PARPBPQ9NWS1 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC20.18■□□□□ 0.82
PARPBPQ9NWS1 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
PARPBPQ9NWS1 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC20.17■□□□□ 0.82
PARPBPQ9NWS1 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
PARPBPQ9NWS1 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
PARPBPQ9NWS1 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
PARPBPQ9NWS1 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PARPBPQ9NWS1 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
PARPBPQ9NWS1 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
PARPBPQ9NWS1 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
PARPBPQ9NWS1 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC20.16■□□□□ 0.82
PARPBPQ9NWS1 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC20.16■□□□□ 0.82
PARPBPQ9NWS1 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PARPBPQ9NWS1 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC20.16■□□□□ 0.82
PARPBPQ9NWS1 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
PARPBPQ9NWS1 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PARPBPQ9NWS1 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
PARPBPQ9NWS1 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC20.16■□□□□ 0.82
PARPBPQ9NWS1 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
PARPBPQ9NWS1 AC004812.2-201ENST00000611079 2094 ntBASIC20.15■□□□□ 0.82
PARPBPQ9NWS1 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
PARPBPQ9NWS1 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PARPBPQ9NWS1 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC20.15■□□□□ 0.82
PARPBPQ9NWS1 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PARPBPQ9NWS1 MIR3621-201ENST00000580529 85 ntBASIC20.15■□□□□ 0.82
PARPBPQ9NWS1 AC131212.1-201ENST00000613771 668 ntBASIC20.15■□□□□ 0.82
PARPBPQ9NWS1 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC20.15■□□□□ 0.82
PARPBPQ9NWS1 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PARPBPQ9NWS1 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
PARPBPQ9NWS1 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PARPBPQ9NWS1 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PARPBPQ9NWS1 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC20.15■□□□□ 0.82
PARPBPQ9NWS1 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
PARPBPQ9NWS1 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
PARPBPQ9NWS1 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC20.14■□□□□ 0.81
PARPBPQ9NWS1 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
PARPBPQ9NWS1 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
PARPBPQ9NWS1 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
PARPBPQ9NWS1 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC20.14■□□□□ 0.81
PARPBPQ9NWS1 AL117332.1-201ENST00000622628 974 ntBASIC20.14■□□□□ 0.81
PARPBPQ9NWS1 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC20.14■□□□□ 0.81
PARPBPQ9NWS1 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
PARPBPQ9NWS1 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
PARPBPQ9NWS1 EI24-213ENST00000618552 1747 ntTSL 5 BASIC20.13■□□□□ 0.81
PARPBPQ9NWS1 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
PARPBPQ9NWS1 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
PARPBPQ9NWS1 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
PARPBPQ9NWS1 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
PARPBPQ9NWS1 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
PARPBPQ9NWS1 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC20.13■□□□□ 0.81
PARPBPQ9NWS1 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PARPBPQ9NWS1 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
PARPBPQ9NWS1 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
PARPBPQ9NWS1 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
PARPBPQ9NWS1 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
PARPBPQ9NWS1 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
PARPBPQ9NWS1 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
PARPBPQ9NWS1 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC20.12■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 49.4 ms