Protein–RNA interactions for Protein: Q9H649

NSUN3, tRNA (cytosine(34)-C(5))-methyltransferase, mitochondrial, humanhuman

Known RBP Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NSUN3Q9H649 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
NSUN3Q9H649 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC24.2■■□□□ 1.46
NSUN3Q9H649 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC24.2■■□□□ 1.46
NSUN3Q9H649 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC24.2■■□□□ 1.46
NSUN3Q9H649 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
NSUN3Q9H649 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC24.19■■□□□ 1.46
NSUN3Q9H649 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC24.19■■□□□ 1.46
NSUN3Q9H649 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
NSUN3Q9H649 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
NSUN3Q9H649 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC24.19■■□□□ 1.46
NSUN3Q9H649 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
NSUN3Q9H649 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
NSUN3Q9H649 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC24.18■■□□□ 1.46
NSUN3Q9H649 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC24.18■■□□□ 1.46
NSUN3Q9H649 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
NSUN3Q9H649 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC24.18■■□□□ 1.46
NSUN3Q9H649 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
NSUN3Q9H649 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC24.18■■□□□ 1.46
NSUN3Q9H649 AICDA-202ENST00000537228 667 ntTSL 5 BASIC24.18■■□□□ 1.46
NSUN3Q9H649 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC24.18■■□□□ 1.46
NSUN3Q9H649 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC24.18■■□□□ 1.46
NSUN3Q9H649 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC24.18■■□□□ 1.46
NSUN3Q9H649 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC24.18■■□□□ 1.46
NSUN3Q9H649 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC24.18■■□□□ 1.46
NSUN3Q9H649 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC24.18■■□□□ 1.46
NSUN3Q9H649 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
NSUN3Q9H649 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC24.18■■□□□ 1.46
NSUN3Q9H649 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC24.17■■□□□ 1.46
NSUN3Q9H649 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
NSUN3Q9H649 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC24.17■■□□□ 1.46
NSUN3Q9H649 CREM-210ENST00000374721 2020 ntTSL 5 BASIC24.17■■□□□ 1.46
NSUN3Q9H649 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC24.17■■□□□ 1.46
NSUN3Q9H649 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
NSUN3Q9H649 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC24.17■■□□□ 1.46
NSUN3Q9H649 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC24.17■■□□□ 1.46
NSUN3Q9H649 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC24.17■■□□□ 1.46
NSUN3Q9H649 AL022069.1-201ENST00000568025 1636 ntBASIC24.17■■□□□ 1.46
NSUN3Q9H649 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
NSUN3Q9H649 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
NSUN3Q9H649 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC24.16■■□□□ 1.46
NSUN3Q9H649 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
NSUN3Q9H649 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC24.16■■□□□ 1.46
NSUN3Q9H649 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC24.16■■□□□ 1.46
NSUN3Q9H649 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
NSUN3Q9H649 DENND3-207ENST00000518347 850 ntTSL 2 BASIC24.16■■□□□ 1.46
NSUN3Q9H649 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC24.16■■□□□ 1.46
NSUN3Q9H649 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC24.16■■□□□ 1.46
NSUN3Q9H649 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC24.15■■□□□ 1.46
NSUN3Q9H649 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC24.15■■□□□ 1.46
NSUN3Q9H649 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
NSUN3Q9H649 VGF-203ENST00000611537 1622 ntTSL 5 BASIC24.15■■□□□ 1.46
NSUN3Q9H649 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC24.15■■□□□ 1.46
NSUN3Q9H649 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC24.15■■□□□ 1.46
NSUN3Q9H649 GXYLT1P2-201ENST00000433312 1230 ntBASIC24.15■■□□□ 1.46
NSUN3Q9H649 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC24.15■■□□□ 1.46
NSUN3Q9H649 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
NSUN3Q9H649 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
NSUN3Q9H649 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC24.15■■□□□ 1.46
NSUN3Q9H649 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC24.14■■□□□ 1.46
NSUN3Q9H649 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC24.14■■□□□ 1.46
NSUN3Q9H649 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC24.14■■□□□ 1.46
NSUN3Q9H649 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC24.14■■□□□ 1.45
NSUN3Q9H649 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC24.14■■□□□ 1.45
NSUN3Q9H649 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
NSUN3Q9H649 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC24.14■■□□□ 1.45
NSUN3Q9H649 VPS53-216ENST00000574029 585 ntTSL 4 BASIC24.14■■□□□ 1.45
NSUN3Q9H649 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC24.14■■□□□ 1.45
NSUN3Q9H649 pRNA.6-201ENST00000610482 90 ntBASIC24.14■■□□□ 1.45
NSUN3Q9H649 pRNA.5-201ENST00000612139 90 ntBASIC24.14■■□□□ 1.45
NSUN3Q9H649 pRNA.11-201ENST00000618423 90 ntBASIC24.14■■□□□ 1.45
NSUN3Q9H649 pRNA.13-201ENST00000619112 90 ntBASIC24.14■■□□□ 1.45
NSUN3Q9H649 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
NSUN3Q9H649 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
NSUN3Q9H649 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
NSUN3Q9H649 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC24.13■■□□□ 1.45
NSUN3Q9H649 AC010501.1-201ENST00000606270 1962 ntBASIC24.13■■□□□ 1.45
NSUN3Q9H649 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC24.13■■□□□ 1.45
NSUN3Q9H649 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC24.13■■□□□ 1.45
NSUN3Q9H649 NKILA-201ENST00000613231 537 ntTSL 4 BASIC24.13■■□□□ 1.45
NSUN3Q9H649 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
NSUN3Q9H649 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
NSUN3Q9H649 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
NSUN3Q9H649 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC24.12■■□□□ 1.45
NSUN3Q9H649 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
NSUN3Q9H649 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC24.12■■□□□ 1.45
NSUN3Q9H649 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC24.12■■□□□ 1.45
NSUN3Q9H649 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC24.12■■□□□ 1.45
NSUN3Q9H649 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC24.12■■□□□ 1.45
NSUN3Q9H649 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC24.12■■□□□ 1.45
NSUN3Q9H649 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC24.12■■□□□ 1.45
NSUN3Q9H649 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC24.11■■□□□ 1.45
NSUN3Q9H649 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC24.11■■□□□ 1.45
NSUN3Q9H649 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC24.11■■□□□ 1.45
NSUN3Q9H649 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC24.11■■□□□ 1.45
NSUN3Q9H649 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
NSUN3Q9H649 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
NSUN3Q9H649 AC012414.1-201ENST00000556676 535 ntBASIC24.1■■□□□ 1.45
NSUN3Q9H649 MIR6084-201ENST00000622012 110 ntBASIC24.1■■□□□ 1.45
NSUN3Q9H649 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC24.1■■□□□ 1.45
NSUN3Q9H649 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC24.1■■□□□ 1.45
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms