Protein–RNA interactions for Protein: Q9H321

VCX3B, Variable charge X-linked protein 3B, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3BQ9H321 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC21.59■■□□□ 1.05
VCX3BQ9H321 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
VCX3BQ9H321 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
VCX3BQ9H321 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
VCX3BQ9H321 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
VCX3BQ9H321 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
VCX3BQ9H321 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
VCX3BQ9H321 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC21.58■■□□□ 1.04
VCX3BQ9H321 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
VCX3BQ9H321 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC21.58■■□□□ 1.04
VCX3BQ9H321 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
VCX3BQ9H321 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
VCX3BQ9H321 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
VCX3BQ9H321 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC21.57■■□□□ 1.04
VCX3BQ9H321 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
VCX3BQ9H321 CIB2-204ENST00000557846 934 ntTSL 3 BASIC21.57■■□□□ 1.04
VCX3BQ9H321 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC21.57■■□□□ 1.04
VCX3BQ9H321 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
VCX3BQ9H321 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
VCX3BQ9H321 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
VCX3BQ9H321 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC21.57■■□□□ 1.04
VCX3BQ9H321 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC21.56■■□□□ 1.04
VCX3BQ9H321 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
VCX3BQ9H321 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
VCX3BQ9H321 BID-212ENST00000614949 1988 ntTSL 5 BASIC21.56■■□□□ 1.04
VCX3BQ9H321 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
VCX3BQ9H321 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
VCX3BQ9H321 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC21.56■■□□□ 1.04
VCX3BQ9H321 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
VCX3BQ9H321 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
VCX3BQ9H321 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC21.56■■□□□ 1.04
VCX3BQ9H321 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
VCX3BQ9H321 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
VCX3BQ9H321 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
VCX3BQ9H321 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
VCX3BQ9H321 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
VCX3BQ9H321 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC21.55■■□□□ 1.04
VCX3BQ9H321 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
VCX3BQ9H321 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
VCX3BQ9H321 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
VCX3BQ9H321 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
VCX3BQ9H321 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
VCX3BQ9H321 ESRRAP2-201ENST00000418437 1549 ntBASIC21.55■■□□□ 1.04
VCX3BQ9H321 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC21.54■■□□□ 1.04
VCX3BQ9H321 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC21.54■■□□□ 1.04
VCX3BQ9H321 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
VCX3BQ9H321 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
VCX3BQ9H321 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
VCX3BQ9H321 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
VCX3BQ9H321 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
VCX3BQ9H321 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
VCX3BQ9H321 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
VCX3BQ9H321 AL359258.2-201ENST00000564063 1566 ntBASIC21.53■■□□□ 1.04
VCX3BQ9H321 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
VCX3BQ9H321 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
VCX3BQ9H321 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
VCX3BQ9H321 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
VCX3BQ9H321 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
VCX3BQ9H321 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
VCX3BQ9H321 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC21.53■■□□□ 1.04
VCX3BQ9H321 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
VCX3BQ9H321 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
VCX3BQ9H321 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
VCX3BQ9H321 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
VCX3BQ9H321 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC21.52■■□□□ 1.04
VCX3BQ9H321 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC21.52■■□□□ 1.04
VCX3BQ9H321 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
VCX3BQ9H321 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC21.52■■□□□ 1.04
VCX3BQ9H321 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
VCX3BQ9H321 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
VCX3BQ9H321 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
VCX3BQ9H321 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
VCX3BQ9H321 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC21.51■■□□□ 1.03
VCX3BQ9H321 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
VCX3BQ9H321 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC21.51■■□□□ 1.03
VCX3BQ9H321 AC136428.2-201ENST00000563187 214 ntBASIC21.51■■□□□ 1.03
VCX3BQ9H321 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC21.51■■□□□ 1.03
VCX3BQ9H321 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
VCX3BQ9H321 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
VCX3BQ9H321 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
VCX3BQ9H321 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
VCX3BQ9H321 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC21.5■■□□□ 1.03
VCX3BQ9H321 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC21.5■■□□□ 1.03
VCX3BQ9H321 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
VCX3BQ9H321 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC21.5■■□□□ 1.03
VCX3BQ9H321 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
VCX3BQ9H321 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
VCX3BQ9H321 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC21.49■■□□□ 1.03
VCX3BQ9H321 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC21.49■■□□□ 1.03
VCX3BQ9H321 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC21.48■■□□□ 1.03
VCX3BQ9H321 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
VCX3BQ9H321 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
VCX3BQ9H321 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
VCX3BQ9H321 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC21.48■■□□□ 1.03
VCX3BQ9H321 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
VCX3BQ9H321 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
VCX3BQ9H321 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
VCX3BQ9H321 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC21.48■■□□□ 1.03
VCX3BQ9H321 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
VCX3BQ9H321 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC21.48■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 92.6 ms