Protein–RNA interactions for Protein: Q9H0A8

COMMD4, COMM domain-containing protein 4, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4Q9H0A8 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
COMMD4Q9H0A8 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
COMMD4Q9H0A8 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
COMMD4Q9H0A8 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
COMMD4Q9H0A8 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
COMMD4Q9H0A8 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC19.97■□□□□ 0.79
COMMD4Q9H0A8 AC087393.1-201ENST00000582896 145 ntBASIC19.97■□□□□ 0.79
COMMD4Q9H0A8 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC19.97■□□□□ 0.79
COMMD4Q9H0A8 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
COMMD4Q9H0A8 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
COMMD4Q9H0A8 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
COMMD4Q9H0A8 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
COMMD4Q9H0A8 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
COMMD4Q9H0A8 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
COMMD4Q9H0A8 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
COMMD4Q9H0A8 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
COMMD4Q9H0A8 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
COMMD4Q9H0A8 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
COMMD4Q9H0A8 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
COMMD4Q9H0A8 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
COMMD4Q9H0A8 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
COMMD4Q9H0A8 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
COMMD4Q9H0A8 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
COMMD4Q9H0A8 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
COMMD4Q9H0A8 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
COMMD4Q9H0A8 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
COMMD4Q9H0A8 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
COMMD4Q9H0A8 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
COMMD4Q9H0A8 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC19.95■□□□□ 0.78
COMMD4Q9H0A8 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC19.95■□□□□ 0.78
COMMD4Q9H0A8 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
COMMD4Q9H0A8 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
COMMD4Q9H0A8 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
COMMD4Q9H0A8 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
COMMD4Q9H0A8 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
COMMD4Q9H0A8 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
COMMD4Q9H0A8 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
COMMD4Q9H0A8 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
COMMD4Q9H0A8 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
COMMD4Q9H0A8 IDNK-203ENST00000405990 629 ntTSL 2 BASIC19.94■□□□□ 0.78
COMMD4Q9H0A8 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC19.94■□□□□ 0.78
COMMD4Q9H0A8 AL592293.1-201ENST00000502889 1188 ntBASIC19.94■□□□□ 0.78
COMMD4Q9H0A8 MIR6765-201ENST00000614092 87 ntBASIC19.94■□□□□ 0.78
COMMD4Q9H0A8 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
COMMD4Q9H0A8 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
COMMD4Q9H0A8 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
COMMD4Q9H0A8 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
COMMD4Q9H0A8 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
COMMD4Q9H0A8 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC19.93■□□□□ 0.78
COMMD4Q9H0A8 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
COMMD4Q9H0A8 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
COMMD4Q9H0A8 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
COMMD4Q9H0A8 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
COMMD4Q9H0A8 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
COMMD4Q9H0A8 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
COMMD4Q9H0A8 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC19.93■□□□□ 0.78
COMMD4Q9H0A8 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
COMMD4Q9H0A8 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
COMMD4Q9H0A8 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
COMMD4Q9H0A8 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC19.92■□□□□ 0.78
COMMD4Q9H0A8 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
COMMD4Q9H0A8 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
COMMD4Q9H0A8 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
COMMD4Q9H0A8 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
COMMD4Q9H0A8 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
COMMD4Q9H0A8 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC19.91■□□□□ 0.78
COMMD4Q9H0A8 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
COMMD4Q9H0A8 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
COMMD4Q9H0A8 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
COMMD4Q9H0A8 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
COMMD4Q9H0A8 SPCS2P3-201ENST00000500401 656 ntBASIC19.91■□□□□ 0.78
COMMD4Q9H0A8 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
COMMD4Q9H0A8 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
COMMD4Q9H0A8 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
COMMD4Q9H0A8 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC19.91■□□□□ 0.78
COMMD4Q9H0A8 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
COMMD4Q9H0A8 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
COMMD4Q9H0A8 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
COMMD4Q9H0A8 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
COMMD4Q9H0A8 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
COMMD4Q9H0A8 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
COMMD4Q9H0A8 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
COMMD4Q9H0A8 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
COMMD4Q9H0A8 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC19.9■□□□□ 0.78
COMMD4Q9H0A8 STK32C-205ENST00000456004 607 ntTSL 2 BASIC19.9■□□□□ 0.78
COMMD4Q9H0A8 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
COMMD4Q9H0A8 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
COMMD4Q9H0A8 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
COMMD4Q9H0A8 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC19.9■□□□□ 0.78
COMMD4Q9H0A8 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
COMMD4Q9H0A8 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
COMMD4Q9H0A8 C1orf229-201ENST00000623686 2258 ntBASIC19.9■□□□□ 0.78
COMMD4Q9H0A8 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
COMMD4Q9H0A8 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
COMMD4Q9H0A8 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
COMMD4Q9H0A8 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
COMMD4Q9H0A8 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
COMMD4Q9H0A8 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.77
COMMD4Q9H0A8 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC19.89■□□□□ 0.77
COMMD4Q9H0A8 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC19.88■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 64.2 ms