Protein–RNA interactions for Protein: Q9C056

NKX6-2, Homeobox protein Nkx-6.2, humanhuman

Predicted RBP Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-2Q9C056 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
NKX6-2Q9C056 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC18.31■□□□□ 0.52
NKX6-2Q9C056 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
NKX6-2Q9C056 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
NKX6-2Q9C056 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
NKX6-2Q9C056 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
NKX6-2Q9C056 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
NKX6-2Q9C056 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
NKX6-2Q9C056 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
NKX6-2Q9C056 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
NKX6-2Q9C056 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC18.3■□□□□ 0.52
NKX6-2Q9C056 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC18.3■□□□□ 0.52
NKX6-2Q9C056 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
NKX6-2Q9C056 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
NKX6-2Q9C056 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
NKX6-2Q9C056 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC18.3■□□□□ 0.52
NKX6-2Q9C056 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
NKX6-2Q9C056 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
NKX6-2Q9C056 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
NKX6-2Q9C056 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
NKX6-2Q9C056 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC18.29■□□□□ 0.52
NKX6-2Q9C056 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
NKX6-2Q9C056 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
NKX6-2Q9C056 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC18.29■□□□□ 0.52
NKX6-2Q9C056 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
NKX6-2Q9C056 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
NKX6-2Q9C056 AC007952.6-201ENST00000573168 2673 ntBASIC18.29■□□□□ 0.52
NKX6-2Q9C056 AC003957.1-201ENST00000625108 2673 ntBASIC18.29■□□□□ 0.52
NKX6-2Q9C056 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
NKX6-2Q9C056 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
NKX6-2Q9C056 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
NKX6-2Q9C056 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
NKX6-2Q9C056 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC18.29■□□□□ 0.52
NKX6-2Q9C056 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
NKX6-2Q9C056 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
NKX6-2Q9C056 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC18.28■□□□□ 0.52
NKX6-2Q9C056 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
NKX6-2Q9C056 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
NKX6-2Q9C056 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
NKX6-2Q9C056 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
NKX6-2Q9C056 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
NKX6-2Q9C056 BID-212ENST00000614949 1988 ntTSL 5 BASIC18.28■□□□□ 0.52
NKX6-2Q9C056 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC18.27■□□□□ 0.52
NKX6-2Q9C056 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
NKX6-2Q9C056 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
NKX6-2Q9C056 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
NKX6-2Q9C056 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
NKX6-2Q9C056 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
NKX6-2Q9C056 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC18.27■□□□□ 0.52
NKX6-2Q9C056 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
NKX6-2Q9C056 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
NKX6-2Q9C056 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC18.27■□□□□ 0.51
NKX6-2Q9C056 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
NKX6-2Q9C056 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC18.26■□□□□ 0.51
NKX6-2Q9C056 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
NKX6-2Q9C056 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
NKX6-2Q9C056 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC18.26■□□□□ 0.51
NKX6-2Q9C056 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
NKX6-2Q9C056 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
NKX6-2Q9C056 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
NKX6-2Q9C056 PALM-208ENST00000592155 2272 ntTSL 4 BASIC18.26■□□□□ 0.51
NKX6-2Q9C056 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
NKX6-2Q9C056 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC18.25■□□□□ 0.51
NKX6-2Q9C056 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
NKX6-2Q9C056 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
NKX6-2Q9C056 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC18.25■□□□□ 0.51
NKX6-2Q9C056 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
NKX6-2Q9C056 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC18.25■□□□□ 0.51
NKX6-2Q9C056 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
NKX6-2Q9C056 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC18.25■□□□□ 0.51
NKX6-2Q9C056 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
NKX6-2Q9C056 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC18.24■□□□□ 0.51
NKX6-2Q9C056 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC18.24■□□□□ 0.51
NKX6-2Q9C056 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
NKX6-2Q9C056 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
NKX6-2Q9C056 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
NKX6-2Q9C056 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
NKX6-2Q9C056 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
NKX6-2Q9C056 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
NKX6-2Q9C056 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
NKX6-2Q9C056 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
NKX6-2Q9C056 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC18.24■□□□□ 0.51
NKX6-2Q9C056 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
NKX6-2Q9C056 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
NKX6-2Q9C056 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
NKX6-2Q9C056 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
NKX6-2Q9C056 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
NKX6-2Q9C056 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
NKX6-2Q9C056 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
NKX6-2Q9C056 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
NKX6-2Q9C056 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
NKX6-2Q9C056 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
NKX6-2Q9C056 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
NKX6-2Q9C056 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC18.23■□□□□ 0.51
NKX6-2Q9C056 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC18.23■□□□□ 0.51
NKX6-2Q9C056 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
NKX6-2Q9C056 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC18.23■□□□□ 0.51
NKX6-2Q9C056 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
NKX6-2Q9C056 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
NKX6-2Q9C056 AC242852.2-201ENST00000615738 1807 ntBASIC18.23■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms