Protein–RNA interactions for Protein: Q8TDI0

CHD5, Chromodomain-helicase-DNA-binding protein 5, humanhuman

Predictions only

Length 1,954 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD5Q8TDI0 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
CHD5Q8TDI0 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
CHD5Q8TDI0 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
CHD5Q8TDI0 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
CHD5Q8TDI0 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
CHD5Q8TDI0 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC23.15■■□□□ 1.3
CHD5Q8TDI0 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC23.15■■□□□ 1.3
CHD5Q8TDI0 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
CHD5Q8TDI0 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC23.15■■□□□ 1.3
CHD5Q8TDI0 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC23.15■■□□□ 1.3
CHD5Q8TDI0 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC23.15■■□□□ 1.3
CHD5Q8TDI0 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC23.14■■□□□ 1.3
CHD5Q8TDI0 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
CHD5Q8TDI0 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC23.14■■□□□ 1.3
CHD5Q8TDI0 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
CHD5Q8TDI0 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
CHD5Q8TDI0 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
CHD5Q8TDI0 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
CHD5Q8TDI0 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC23.14■■□□□ 1.29
CHD5Q8TDI0 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
CHD5Q8TDI0 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC23.13■■□□□ 1.29
CHD5Q8TDI0 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC23.13■■□□□ 1.29
CHD5Q8TDI0 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
CHD5Q8TDI0 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC23.13■■□□□ 1.29
CHD5Q8TDI0 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC23.13■■□□□ 1.29
CHD5Q8TDI0 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC23.13■■□□□ 1.29
CHD5Q8TDI0 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC23.13■■□□□ 1.29
CHD5Q8TDI0 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
CHD5Q8TDI0 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
CHD5Q8TDI0 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC23.12■■□□□ 1.29
CHD5Q8TDI0 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC23.12■■□□□ 1.29
CHD5Q8TDI0 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
CHD5Q8TDI0 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC23.12■■□□□ 1.29
CHD5Q8TDI0 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC23.12■■□□□ 1.29
CHD5Q8TDI0 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC23.12■■□□□ 1.29
CHD5Q8TDI0 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC23.12■■□□□ 1.29
CHD5Q8TDI0 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
CHD5Q8TDI0 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC23.12■■□□□ 1.29
CHD5Q8TDI0 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
CHD5Q8TDI0 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC23.11■■□□□ 1.29
CHD5Q8TDI0 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC23.11■■□□□ 1.29
CHD5Q8TDI0 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
CHD5Q8TDI0 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
CHD5Q8TDI0 RPP21-222ENST00000433076 577 ntTSL 2 BASIC23.11■■□□□ 1.29
CHD5Q8TDI0 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC23.11■■□□□ 1.29
CHD5Q8TDI0 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC23.11■■□□□ 1.29
CHD5Q8TDI0 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
CHD5Q8TDI0 AC079630.1-202ENST00000618127 1840 ntBASIC23.11■■□□□ 1.29
CHD5Q8TDI0 AC009102.2-201ENST00000606772 1639 ntBASIC23.1■■□□□ 1.29
CHD5Q8TDI0 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC23.1■■□□□ 1.29
CHD5Q8TDI0 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
CHD5Q8TDI0 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC23.1■■□□□ 1.29
CHD5Q8TDI0 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC23.1■■□□□ 1.29
CHD5Q8TDI0 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC23.1■■□□□ 1.29
CHD5Q8TDI0 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
CHD5Q8TDI0 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC23.1■■□□□ 1.29
CHD5Q8TDI0 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC23.09■■□□□ 1.29
CHD5Q8TDI0 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC23.09■■□□□ 1.29
CHD5Q8TDI0 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
CHD5Q8TDI0 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
CHD5Q8TDI0 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC23.09■■□□□ 1.29
CHD5Q8TDI0 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
CHD5Q8TDI0 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
CHD5Q8TDI0 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
CHD5Q8TDI0 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC23.09■■□□□ 1.29
CHD5Q8TDI0 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC23.09■■□□□ 1.29
CHD5Q8TDI0 H19-210ENST00000439725 1929 ntTSL 2 BASIC23.09■■□□□ 1.29
CHD5Q8TDI0 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC23.08■■□□□ 1.29
CHD5Q8TDI0 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC23.08■■□□□ 1.29
CHD5Q8TDI0 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
CHD5Q8TDI0 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC23.08■■□□□ 1.29
CHD5Q8TDI0 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC23.08■■□□□ 1.28
CHD5Q8TDI0 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC23.08■■□□□ 1.28
CHD5Q8TDI0 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
CHD5Q8TDI0 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
CHD5Q8TDI0 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC23.07■■□□□ 1.28
CHD5Q8TDI0 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC23.07■■□□□ 1.28
CHD5Q8TDI0 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC23.07■■□□□ 1.28
CHD5Q8TDI0 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC23.07■■□□□ 1.28
CHD5Q8TDI0 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC23.07■■□□□ 1.28
CHD5Q8TDI0 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC23.07■■□□□ 1.28
CHD5Q8TDI0 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC23.07■■□□□ 1.28
CHD5Q8TDI0 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC23.07■■□□□ 1.28
CHD5Q8TDI0 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
CHD5Q8TDI0 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC23.06■■□□□ 1.28
CHD5Q8TDI0 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
CHD5Q8TDI0 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC23.06■■□□□ 1.28
CHD5Q8TDI0 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC23.06■■□□□ 1.28
CHD5Q8TDI0 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC23.06■■□□□ 1.28
CHD5Q8TDI0 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
CHD5Q8TDI0 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC23.06■■□□□ 1.28
CHD5Q8TDI0 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC23.06■■□□□ 1.28
CHD5Q8TDI0 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC23.06■■□□□ 1.28
CHD5Q8TDI0 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC23.06■■□□□ 1.28
CHD5Q8TDI0 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
CHD5Q8TDI0 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC23.05■■□□□ 1.28
CHD5Q8TDI0 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
CHD5Q8TDI0 SF1-220ENST00000626028 704 ntTSL 2 BASIC23.05■■□□□ 1.28
CHD5Q8TDI0 GATM-206ENST00000558336 1522 ntTSL 2 BASIC23.05■■□□□ 1.28
CHD5Q8TDI0 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Retrieved 100 of 98,524 protein–RNA pairs in 60.2 ms