Protein–RNA interactions for Protein: Q8NAV1

PRPF38A, Pre-mRNA-splicing factor 38A, humanhuman

Known RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38AQ8NAV1 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
PRPF38AQ8NAV1 MIR4767-201ENST00000582827 78 ntBASIC26.3■■□□□ 1.8
PRPF38AQ8NAV1 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC26.3■■□□□ 1.8
PRPF38AQ8NAV1 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
PRPF38AQ8NAV1 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC26.29■■□□□ 1.8
PRPF38AQ8NAV1 MIR939-201ENST00000401314 82 ntBASIC26.29■■□□□ 1.8
PRPF38AQ8NAV1 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC26.29■■□□□ 1.8
PRPF38AQ8NAV1 AF213884.3-201ENST00000563833 479 ntBASIC26.29■■□□□ 1.8
PRPF38AQ8NAV1 AC011298.3-201ENST00000615796 283 ntBASIC26.29■■□□□ 1.8
PRPF38AQ8NAV1 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
PRPF38AQ8NAV1 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC26.29■■□□□ 1.8
PRPF38AQ8NAV1 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
PRPF38AQ8NAV1 AP001330.3-201ENST00000520123 633 ntBASIC26.28■■□□□ 1.8
PRPF38AQ8NAV1 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC26.28■■□□□ 1.8
PRPF38AQ8NAV1 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
PRPF38AQ8NAV1 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
PRPF38AQ8NAV1 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
PRPF38AQ8NAV1 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC26.28■■□□□ 1.8
PRPF38AQ8NAV1 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC26.28■■□□□ 1.8
PRPF38AQ8NAV1 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
PRPF38AQ8NAV1 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
PRPF38AQ8NAV1 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC26.27■■□□□ 1.8
PRPF38AQ8NAV1 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
PRPF38AQ8NAV1 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
PRPF38AQ8NAV1 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
PRPF38AQ8NAV1 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
PRPF38AQ8NAV1 EI24-204ENST00000527235 1625 ntTSL 5 BASIC26.26■■□□□ 1.79
PRPF38AQ8NAV1 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
PRPF38AQ8NAV1 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC26.26■■□□□ 1.79
PRPF38AQ8NAV1 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC26.26■■□□□ 1.79
PRPF38AQ8NAV1 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
PRPF38AQ8NAV1 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
PRPF38AQ8NAV1 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC26.25■■□□□ 1.79
PRPF38AQ8NAV1 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
PRPF38AQ8NAV1 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
PRPF38AQ8NAV1 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
PRPF38AQ8NAV1 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC26.25■■□□□ 1.79
PRPF38AQ8NAV1 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC26.25■■□□□ 1.79
PRPF38AQ8NAV1 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC26.25■■□□□ 1.79
PRPF38AQ8NAV1 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC26.25■■□□□ 1.79
PRPF38AQ8NAV1 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
PRPF38AQ8NAV1 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC26.24■■□□□ 1.79
PRPF38AQ8NAV1 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
PRPF38AQ8NAV1 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC26.24■■□□□ 1.79
PRPF38AQ8NAV1 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
PRPF38AQ8NAV1 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
PRPF38AQ8NAV1 HES6-206ENST00000409574 738 ntTSL 2 BASIC26.24■■□□□ 1.79
PRPF38AQ8NAV1 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
PRPF38AQ8NAV1 AC091305.1-201ENST00000479476 895 ntBASIC26.24■■□□□ 1.79
PRPF38AQ8NAV1 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC26.24■■□□□ 1.79
PRPF38AQ8NAV1 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC26.24■■□□□ 1.79
PRPF38AQ8NAV1 NKILA-201ENST00000613231 537 ntTSL 4 BASIC26.24■■□□□ 1.79
PRPF38AQ8NAV1 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
PRPF38AQ8NAV1 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC26.24■■□□□ 1.79
PRPF38AQ8NAV1 VGF-203ENST00000611537 1622 ntTSL 5 BASIC26.24■■□□□ 1.79
PRPF38AQ8NAV1 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC26.24■■□□□ 1.79
PRPF38AQ8NAV1 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC26.24■■□□□ 1.79
PRPF38AQ8NAV1 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC26.23■■□□□ 1.79
PRPF38AQ8NAV1 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC26.23■■□□□ 1.79
PRPF38AQ8NAV1 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC26.23■■□□□ 1.79
PRPF38AQ8NAV1 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC26.23■■□□□ 1.79
PRPF38AQ8NAV1 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
PRPF38AQ8NAV1 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC26.23■■□□□ 1.79
PRPF38AQ8NAV1 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
PRPF38AQ8NAV1 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
PRPF38AQ8NAV1 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
PRPF38AQ8NAV1 AC142381.3-201ENST00000568208 1670 ntBASIC26.22■■□□□ 1.79
PRPF38AQ8NAV1 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
PRPF38AQ8NAV1 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC26.22■■□□□ 1.79
PRPF38AQ8NAV1 AC105265.2-201ENST00000467189 838 ntBASIC26.22■■□□□ 1.79
PRPF38AQ8NAV1 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC26.22■■□□□ 1.79
PRPF38AQ8NAV1 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC26.22■■□□□ 1.79
PRPF38AQ8NAV1 TMEM202-AS1-202ENST00000565181 2325 ntBASIC26.22■■□□□ 1.79
PRPF38AQ8NAV1 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
PRPF38AQ8NAV1 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC26.22■■□□□ 1.79
PRPF38AQ8NAV1 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC26.21■■□□□ 1.79
PRPF38AQ8NAV1 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
PRPF38AQ8NAV1 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC26.21■■□□□ 1.79
PRPF38AQ8NAV1 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
PRPF38AQ8NAV1 AC006455.2-201ENST00000429931 906 ntBASIC26.21■■□□□ 1.79
PRPF38AQ8NAV1 AC009086.3-201ENST00000623486 1008 ntBASIC26.21■■□□□ 1.79
PRPF38AQ8NAV1 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
PRPF38AQ8NAV1 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
PRPF38AQ8NAV1 AC138932.3-201ENST00000567634 1902 ntBASIC26.2■■□□□ 1.79
PRPF38AQ8NAV1 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC26.2■■□□□ 1.78
PRPF38AQ8NAV1 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC26.2■■□□□ 1.78
PRPF38AQ8NAV1 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC26.2■■□□□ 1.78
PRPF38AQ8NAV1 AC136469.2-201ENST00000623944 1028 ntBASIC26.2■■□□□ 1.78
PRPF38AQ8NAV1 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC26.2■■□□□ 1.78
PRPF38AQ8NAV1 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC26.2■■□□□ 1.78
PRPF38AQ8NAV1 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC26.2■■□□□ 1.78
PRPF38AQ8NAV1 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC26.2■■□□□ 1.78
PRPF38AQ8NAV1 RASA4CP-201ENST00000424092 1398 ntBASIC26.2■■□□□ 1.78
PRPF38AQ8NAV1 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC26.19■■□□□ 1.78
PRPF38AQ8NAV1 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
PRPF38AQ8NAV1 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC26.19■■□□□ 1.78
PRPF38AQ8NAV1 LGR4-203ENST00000480977 492 ntTSL 2 BASIC26.19■■□□□ 1.78
PRPF38AQ8NAV1 MIR3181-201ENST00000578512 73 ntBASIC26.19■■□□□ 1.78
PRPF38AQ8NAV1 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC26.19■■□□□ 1.78
PRPF38AQ8NAV1 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms