Protein–RNA interactions for Protein: Q86UE6

LRRTM1, Leucine-rich repeat transmembrane neuronal protein 1, humanhuman

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1Q86UE6 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC19.69■□□□□ 0.74
LRRTM1Q86UE6 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
LRRTM1Q86UE6 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC19.69■□□□□ 0.74
LRRTM1Q86UE6 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
LRRTM1Q86UE6 AC127496.7-201ENST00000625110 1798 ntBASIC19.69■□□□□ 0.74
LRRTM1Q86UE6 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
LRRTM1Q86UE6 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
LRRTM1Q86UE6 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
LRRTM1Q86UE6 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC19.69■□□□□ 0.74
LRRTM1Q86UE6 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC19.68■□□□□ 0.74
LRRTM1Q86UE6 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
LRRTM1Q86UE6 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
LRRTM1Q86UE6 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
LRRTM1Q86UE6 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
LRRTM1Q86UE6 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
LRRTM1Q86UE6 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC19.68■□□□□ 0.74
LRRTM1Q86UE6 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
LRRTM1Q86UE6 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
LRRTM1Q86UE6 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
LRRTM1Q86UE6 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
LRRTM1Q86UE6 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
LRRTM1Q86UE6 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC19.67■□□□□ 0.74
LRRTM1Q86UE6 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
LRRTM1Q86UE6 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
LRRTM1Q86UE6 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
LRRTM1Q86UE6 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
LRRTM1Q86UE6 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
LRRTM1Q86UE6 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
LRRTM1Q86UE6 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
LRRTM1Q86UE6 AL022069.1-201ENST00000568025 1636 ntBASIC19.67■□□□□ 0.74
LRRTM1Q86UE6 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
LRRTM1Q86UE6 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
LRRTM1Q86UE6 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
LRRTM1Q86UE6 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
LRRTM1Q86UE6 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
LRRTM1Q86UE6 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
LRRTM1Q86UE6 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC19.67■□□□□ 0.74
LRRTM1Q86UE6 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
LRRTM1Q86UE6 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
LRRTM1Q86UE6 GPX1-201ENST00000419349 1106 ntBASIC19.66■□□□□ 0.74
LRRTM1Q86UE6 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
LRRTM1Q86UE6 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
LRRTM1Q86UE6 EI24-204ENST00000527235 1625 ntTSL 5 BASIC19.65■□□□□ 0.74
LRRTM1Q86UE6 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
LRRTM1Q86UE6 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
LRRTM1Q86UE6 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
LRRTM1Q86UE6 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
LRRTM1Q86UE6 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC19.65■□□□□ 0.74
LRRTM1Q86UE6 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
LRRTM1Q86UE6 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
LRRTM1Q86UE6 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
LRRTM1Q86UE6 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
LRRTM1Q86UE6 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
LRRTM1Q86UE6 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC19.65■□□□□ 0.74
LRRTM1Q86UE6 GCA-201ENST00000233612 1694 ntTSL 2 BASIC19.65■□□□□ 0.74
LRRTM1Q86UE6 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
LRRTM1Q86UE6 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC19.65■□□□□ 0.74
LRRTM1Q86UE6 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
LRRTM1Q86UE6 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
LRRTM1Q86UE6 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC19.64■□□□□ 0.74
LRRTM1Q86UE6 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
LRRTM1Q86UE6 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
LRRTM1Q86UE6 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC19.64■□□□□ 0.73
LRRTM1Q86UE6 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC19.64■□□□□ 0.73
LRRTM1Q86UE6 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
LRRTM1Q86UE6 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
LRRTM1Q86UE6 PVT1-219ENST00000523427 938 ntTSL 3 BASIC19.64■□□□□ 0.73
LRRTM1Q86UE6 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
LRRTM1Q86UE6 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
LRRTM1Q86UE6 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC19.64■□□□□ 0.73
LRRTM1Q86UE6 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC19.64■□□□□ 0.73
LRRTM1Q86UE6 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
LRRTM1Q86UE6 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
LRRTM1Q86UE6 COMT-203ENST00000403184 2217 ntTSL 2 BASIC19.64■□□□□ 0.73
LRRTM1Q86UE6 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
LRRTM1Q86UE6 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
LRRTM1Q86UE6 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
LRRTM1Q86UE6 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC19.63■□□□□ 0.73
LRRTM1Q86UE6 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
LRRTM1Q86UE6 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
LRRTM1Q86UE6 AC137767.1-201ENST00000602918 1920 ntBASIC19.63■□□□□ 0.73
LRRTM1Q86UE6 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
LRRTM1Q86UE6 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
LRRTM1Q86UE6 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC19.63■□□□□ 0.73
LRRTM1Q86UE6 SPCS2P3-201ENST00000500401 656 ntBASIC19.63■□□□□ 0.73
LRRTM1Q86UE6 AC087393.1-201ENST00000582896 145 ntBASIC19.63■□□□□ 0.73
LRRTM1Q86UE6 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
LRRTM1Q86UE6 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
LRRTM1Q86UE6 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC19.62■□□□□ 0.73
LRRTM1Q86UE6 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
LRRTM1Q86UE6 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
LRRTM1Q86UE6 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
LRRTM1Q86UE6 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC19.62■□□□□ 0.73
LRRTM1Q86UE6 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC19.62■□□□□ 0.73
LRRTM1Q86UE6 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
LRRTM1Q86UE6 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
LRRTM1Q86UE6 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
LRRTM1Q86UE6 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
LRRTM1Q86UE6 ALDH1A3-203ENST00000557963 1670 ntBASIC19.62■□□□□ 0.73
LRRTM1Q86UE6 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 68.5 ms