Protein–RNA interactions for Protein: Q5XG99

LYSMD4, LysM and putative peptidoglycan-binding domain-containing protein 4, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4Q5XG99 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
LYSMD4Q5XG99 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC22.49■■□□□ 1.19
LYSMD4Q5XG99 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
LYSMD4Q5XG99 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC22.49■■□□□ 1.19
LYSMD4Q5XG99 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC22.49■■□□□ 1.19
LYSMD4Q5XG99 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC22.49■■□□□ 1.19
LYSMD4Q5XG99 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
LYSMD4Q5XG99 AICDA-202ENST00000537228 667 ntTSL 5 BASIC22.49■■□□□ 1.19
LYSMD4Q5XG99 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
LYSMD4Q5XG99 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC22.49■■□□□ 1.19
LYSMD4Q5XG99 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC22.49■■□□□ 1.19
LYSMD4Q5XG99 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC22.49■■□□□ 1.19
LYSMD4Q5XG99 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC22.48■■□□□ 1.19
LYSMD4Q5XG99 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC22.48■■□□□ 1.19
LYSMD4Q5XG99 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
LYSMD4Q5XG99 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
LYSMD4Q5XG99 SLC47A1P1-202ENST00000449666 945 ntBASIC22.48■■□□□ 1.19
LYSMD4Q5XG99 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC22.48■■□□□ 1.19
LYSMD4Q5XG99 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC22.48■■□□□ 1.19
LYSMD4Q5XG99 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC22.48■■□□□ 1.19
LYSMD4Q5XG99 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC22.48■■□□□ 1.19
LYSMD4Q5XG99 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
LYSMD4Q5XG99 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
LYSMD4Q5XG99 AL161729.1-201ENST00000604104 1402 ntBASIC22.48■■□□□ 1.19
LYSMD4Q5XG99 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
LYSMD4Q5XG99 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC22.47■■□□□ 1.19
LYSMD4Q5XG99 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC22.47■■□□□ 1.19
LYSMD4Q5XG99 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC22.47■■□□□ 1.19
LYSMD4Q5XG99 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC22.47■■□□□ 1.19
LYSMD4Q5XG99 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC22.47■■□□□ 1.19
LYSMD4Q5XG99 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC22.47■■□□□ 1.19
LYSMD4Q5XG99 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC22.47■■□□□ 1.19
LYSMD4Q5XG99 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC22.47■■□□□ 1.19
LYSMD4Q5XG99 AL358852.1-201ENST00000623174 1268 ntBASIC22.47■■□□□ 1.19
LYSMD4Q5XG99 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC22.47■■□□□ 1.19
LYSMD4Q5XG99 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
LYSMD4Q5XG99 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC22.47■■□□□ 1.19
LYSMD4Q5XG99 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC22.47■■□□□ 1.19
LYSMD4Q5XG99 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC22.47■■□□□ 1.19
LYSMD4Q5XG99 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
LYSMD4Q5XG99 USF2-207ENST00000595068 1612 ntTSL 5 BASIC22.46■■□□□ 1.19
LYSMD4Q5XG99 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC22.46■■□□□ 1.19
LYSMD4Q5XG99 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC22.46■■□□□ 1.19
LYSMD4Q5XG99 DUX4L2-201ENST00000561772 1275 ntBASIC22.46■■□□□ 1.19
LYSMD4Q5XG99 RAB43-208ENST00000615093 783 ntTSL 5 BASIC22.46■■□□□ 1.19
LYSMD4Q5XG99 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC22.46■■□□□ 1.19
LYSMD4Q5XG99 DUX4L6-201ENST00000626483 1275 ntBASIC22.46■■□□□ 1.19
LYSMD4Q5XG99 DUX4L1-201ENST00000627662 1275 ntBASIC22.46■■□□□ 1.19
LYSMD4Q5XG99 DUX4L8-201ENST00000629013 1275 ntBASIC22.46■■□□□ 1.19
LYSMD4Q5XG99 DUX4L3-201ENST00000630187 1275 ntBASIC22.46■■□□□ 1.19
LYSMD4Q5XG99 DUX4L7-201ENST00000630678 1275 ntBASIC22.46■■□□□ 1.19
LYSMD4Q5XG99 DUX4L5-201ENST00000630834 1275 ntBASIC22.46■■□□□ 1.19
LYSMD4Q5XG99 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC22.46■■□□□ 1.19
LYSMD4Q5XG99 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC22.46■■□□□ 1.19
LYSMD4Q5XG99 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
LYSMD4Q5XG99 CD37-213ENST00000598095 1598 ntTSL 2 BASIC22.46■■□□□ 1.19
LYSMD4Q5XG99 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC22.45■■□□□ 1.19
LYSMD4Q5XG99 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.19
LYSMD4Q5XG99 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
LYSMD4Q5XG99 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
LYSMD4Q5XG99 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC22.45■■□□□ 1.18
LYSMD4Q5XG99 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC22.45■■□□□ 1.18
LYSMD4Q5XG99 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC22.45■■□□□ 1.18
LYSMD4Q5XG99 GTSE1-AS1-202ENST00000623117 1518 ntBASIC22.45■■□□□ 1.18
LYSMD4Q5XG99 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC22.45■■□□□ 1.18
LYSMD4Q5XG99 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC22.44■■□□□ 1.18
LYSMD4Q5XG99 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC22.44■■□□□ 1.18
LYSMD4Q5XG99 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
LYSMD4Q5XG99 AC027612.3-201ENST00000413684 1047 ntBASIC22.44■■□□□ 1.18
LYSMD4Q5XG99 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
LYSMD4Q5XG99 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
LYSMD4Q5XG99 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC22.44■■□□□ 1.18
LYSMD4Q5XG99 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
LYSMD4Q5XG99 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC22.44■■□□□ 1.18
LYSMD4Q5XG99 CEBPA-AS1-201ENST00000592982 2198 ntBASIC22.44■■□□□ 1.18
LYSMD4Q5XG99 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
LYSMD4Q5XG99 AC141586.4-201ENST00000624558 1573 ntBASIC22.43■■□□□ 1.18
LYSMD4Q5XG99 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
LYSMD4Q5XG99 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
LYSMD4Q5XG99 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC22.43■■□□□ 1.18
LYSMD4Q5XG99 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC22.43■■□□□ 1.18
LYSMD4Q5XG99 AC123595.1-201ENST00000440769 1046 ntBASIC22.43■■□□□ 1.18
LYSMD4Q5XG99 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC22.43■■□□□ 1.18
LYSMD4Q5XG99 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC22.43■■□□□ 1.18
LYSMD4Q5XG99 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC22.43■■□□□ 1.18
LYSMD4Q5XG99 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC22.43■■□□□ 1.18
LYSMD4Q5XG99 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC22.42■■□□□ 1.18
LYSMD4Q5XG99 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
LYSMD4Q5XG99 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC22.42■■□□□ 1.18
LYSMD4Q5XG99 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC22.42■■□□□ 1.18
LYSMD4Q5XG99 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC22.42■■□□□ 1.18
LYSMD4Q5XG99 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC22.42■■□□□ 1.18
LYSMD4Q5XG99 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
LYSMD4Q5XG99 IGHV3-19-201ENST00000521488 291 ntBASIC22.42■■□□□ 1.18
LYSMD4Q5XG99 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
LYSMD4Q5XG99 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
LYSMD4Q5XG99 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
LYSMD4Q5XG99 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC22.41■■□□□ 1.18
LYSMD4Q5XG99 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC22.41■■□□□ 1.18
LYSMD4Q5XG99 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms