Protein–RNA interactions for Protein: P48230

TM4SF4, Transmembrane 4 L6 family member 4, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF4P48230 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC26.43■■□□□ 1.82
TM4SF4P48230 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
TM4SF4P48230 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
TM4SF4P48230 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC26.42■■□□□ 1.82
TM4SF4P48230 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
TM4SF4P48230 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC26.42■■□□□ 1.82
TM4SF4P48230 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
TM4SF4P48230 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
TM4SF4P48230 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC26.42■■□□□ 1.82
TM4SF4P48230 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC26.42■■□□□ 1.82
TM4SF4P48230 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC26.42■■□□□ 1.82
TM4SF4P48230 GXYLT1P5-201ENST00000614548 1189 ntBASIC26.41■■□□□ 1.82
TM4SF4P48230 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC26.41■■□□□ 1.82
TM4SF4P48230 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC26.41■■□□□ 1.82
TM4SF4P48230 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
TM4SF4P48230 ERN1-208ENST00000606895 2068 ntBASIC26.4■■□□□ 1.82
TM4SF4P48230 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC26.4■■□□□ 1.82
TM4SF4P48230 AC006015.1-201ENST00000429970 570 ntBASIC26.4■■□□□ 1.82
TM4SF4P48230 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC26.4■■□□□ 1.82
TM4SF4P48230 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC26.4■■□□□ 1.82
TM4SF4P48230 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
TM4SF4P48230 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
TM4SF4P48230 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
TM4SF4P48230 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC26.39■■□□□ 1.82
TM4SF4P48230 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC26.39■■□□□ 1.82
TM4SF4P48230 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC26.39■■□□□ 1.82
TM4SF4P48230 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC26.39■■□□□ 1.82
TM4SF4P48230 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC26.39■■□□□ 1.81
TM4SF4P48230 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC26.38■■□□□ 1.81
TM4SF4P48230 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC26.38■■□□□ 1.81
TM4SF4P48230 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
TM4SF4P48230 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
TM4SF4P48230 CDCA4P2-201ENST00000441182 718 ntBASIC26.38■■□□□ 1.81
TM4SF4P48230 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC26.38■■□□□ 1.81
TM4SF4P48230 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC26.38■■□□□ 1.81
TM4SF4P48230 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC26.38■■□□□ 1.81
TM4SF4P48230 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC26.38■■□□□ 1.81
TM4SF4P48230 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
TM4SF4P48230 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC26.38■■□□□ 1.81
TM4SF4P48230 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
TM4SF4P48230 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
TM4SF4P48230 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC26.37■■□□□ 1.81
TM4SF4P48230 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC26.37■■□□□ 1.81
TM4SF4P48230 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC26.37■■□□□ 1.81
TM4SF4P48230 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC26.37■■□□□ 1.81
TM4SF4P48230 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC26.36■■□□□ 1.81
TM4SF4P48230 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC26.36■■□□□ 1.81
TM4SF4P48230 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
TM4SF4P48230 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC26.36■■□□□ 1.81
TM4SF4P48230 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC26.36■■□□□ 1.81
TM4SF4P48230 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
TM4SF4P48230 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
TM4SF4P48230 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC26.36■■□□□ 1.81
TM4SF4P48230 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC26.36■■□□□ 1.81
TM4SF4P48230 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC26.36■■□□□ 1.81
TM4SF4P48230 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC26.36■■□□□ 1.81
TM4SF4P48230 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC26.36■■□□□ 1.81
TM4SF4P48230 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
TM4SF4P48230 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC26.35■■□□□ 1.81
TM4SF4P48230 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC26.35■■□□□ 1.81
TM4SF4P48230 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
TM4SF4P48230 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
TM4SF4P48230 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC26.35■■□□□ 1.81
TM4SF4P48230 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC26.35■■□□□ 1.81
TM4SF4P48230 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
TM4SF4P48230 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC26.34■■□□□ 1.81
TM4SF4P48230 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
TM4SF4P48230 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC26.34■■□□□ 1.81
TM4SF4P48230 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
TM4SF4P48230 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
TM4SF4P48230 TMEM191A-211ENST00000637163 1067 ntBASIC26.34■■□□□ 1.81
TM4SF4P48230 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
TM4SF4P48230 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC26.33■■□□□ 1.81
TM4SF4P48230 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC26.33■■□□□ 1.81
TM4SF4P48230 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
TM4SF4P48230 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC26.33■■□□□ 1.81
TM4SF4P48230 AC104771.1-201ENST00000603335 964 ntBASIC26.33■■□□□ 1.81
TM4SF4P48230 AC073111.5-205ENST00000641717 521 ntBASIC26.33■■□□□ 1.81
TM4SF4P48230 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC26.33■■□□□ 1.81
TM4SF4P48230 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC26.33■■□□□ 1.81
TM4SF4P48230 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC26.32■■□□□ 1.8
TM4SF4P48230 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC26.32■■□□□ 1.8
TM4SF4P48230 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC26.32■■□□□ 1.8
TM4SF4P48230 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
TM4SF4P48230 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC26.32■■□□□ 1.8
TM4SF4P48230 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC26.32■■□□□ 1.8
TM4SF4P48230 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
TM4SF4P48230 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC26.31■■□□□ 1.8
TM4SF4P48230 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC26.31■■□□□ 1.8
TM4SF4P48230 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
TM4SF4P48230 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC26.31■■□□□ 1.8
TM4SF4P48230 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC26.31■■□□□ 1.8
TM4SF4P48230 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC26.31■■□□□ 1.8
TM4SF4P48230 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC26.31■■□□□ 1.8
TM4SF4P48230 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
TM4SF4P48230 AC141586.4-201ENST00000624558 1573 ntBASIC26.31■■□□□ 1.8
TM4SF4P48230 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC26.31■■□□□ 1.8
TM4SF4P48230 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC26.3■■□□□ 1.8
TM4SF4P48230 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC26.3■■□□□ 1.8
TM4SF4P48230 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
Retrieved 100 of 98,524 protein–RNA pairs in 13.2 ms