Protein–RNA interactions for Protein: P0DH78

RNF224, RING finger protein 224, humanhuman

Predictions only

Length 156 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF224P0DH78 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
RNF224P0DH78 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
RNF224P0DH78 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
RNF224P0DH78 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC20.22■□□□□ 0.83
RNF224P0DH78 AC123595.1-201ENST00000440769 1046 ntBASIC20.22■□□□□ 0.83
RNF224P0DH78 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RNF224P0DH78 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RNF224P0DH78 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
RNF224P0DH78 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
RNF224P0DH78 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RNF224P0DH78 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
RNF224P0DH78 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RNF224P0DH78 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC20.21■□□□□ 0.83
RNF224P0DH78 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC20.21■□□□□ 0.83
RNF224P0DH78 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC20.21■□□□□ 0.83
RNF224P0DH78 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC20.21■□□□□ 0.83
RNF224P0DH78 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RNF224P0DH78 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC20.21■□□□□ 0.83
RNF224P0DH78 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
RNF224P0DH78 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RNF224P0DH78 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC20.21■□□□□ 0.83
RNF224P0DH78 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC20.2■□□□□ 0.82
RNF224P0DH78 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC20.2■□□□□ 0.82
RNF224P0DH78 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RNF224P0DH78 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC20.2■□□□□ 0.82
RNF224P0DH78 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RNF224P0DH78 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC20.2■□□□□ 0.82
RNF224P0DH78 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
RNF224P0DH78 GXYLT1P5-201ENST00000614548 1189 ntBASIC20.2■□□□□ 0.82
RNF224P0DH78 PKM-203ENST00000389093 2279 ntTSL 5 BASIC20.2■□□□□ 0.82
RNF224P0DH78 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
RNF224P0DH78 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
RNF224P0DH78 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC20.19■□□□□ 0.82
RNF224P0DH78 AC131274.2-201ENST00000580697 1507 ntBASIC20.19■□□□□ 0.82
RNF224P0DH78 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
RNF224P0DH78 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC20.19■□□□□ 0.82
RNF224P0DH78 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RNF224P0DH78 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
RNF224P0DH78 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RNF224P0DH78 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
RNF224P0DH78 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
RNF224P0DH78 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
RNF224P0DH78 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
RNF224P0DH78 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RNF224P0DH78 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC20.18■□□□□ 0.82
RNF224P0DH78 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RNF224P0DH78 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC20.18■□□□□ 0.82
RNF224P0DH78 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
RNF224P0DH78 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
RNF224P0DH78 AC009086.3-201ENST00000623486 1008 ntBASIC20.18■□□□□ 0.82
RNF224P0DH78 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
RNF224P0DH78 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RNF224P0DH78 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RNF224P0DH78 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RNF224P0DH78 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RNF224P0DH78 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RNF224P0DH78 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RNF224P0DH78 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
RNF224P0DH78 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RNF224P0DH78 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RNF224P0DH78 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC20.17■□□□□ 0.82
RNF224P0DH78 EMC9-206ENST00000560403 872 ntTSL 2 BASIC20.17■□□□□ 0.82
RNF224P0DH78 AL358852.1-201ENST00000623174 1268 ntBASIC20.17■□□□□ 0.82
RNF224P0DH78 AC241377.3-202ENST00000626088 1088 ntBASIC20.17■□□□□ 0.82
RNF224P0DH78 AC241585.3-202ENST00000628937 1088 ntBASIC20.17■□□□□ 0.82
RNF224P0DH78 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC20.17■□□□□ 0.82
RNF224P0DH78 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
RNF224P0DH78 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC20.16■□□□□ 0.82
RNF224P0DH78 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
RNF224P0DH78 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC20.16■□□□□ 0.82
RNF224P0DH78 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
RNF224P0DH78 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
RNF224P0DH78 RAP2CP1-201ENST00000605103 478 ntBASIC20.16■□□□□ 0.82
RNF224P0DH78 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
RNF224P0DH78 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
RNF224P0DH78 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
RNF224P0DH78 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RNF224P0DH78 KRT18P14-201ENST00000534205 1250 ntBASIC20.15■□□□□ 0.82
RNF224P0DH78 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
RNF224P0DH78 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
RNF224P0DH78 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC20.15■□□□□ 0.82
RNF224P0DH78 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
RNF224P0DH78 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RNF224P0DH78 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC20.14■□□□□ 0.81
RNF224P0DH78 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
RNF224P0DH78 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
RNF224P0DH78 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
RNF224P0DH78 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC20.14■□□□□ 0.81
RNF224P0DH78 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
RNF224P0DH78 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC20.14■□□□□ 0.81
RNF224P0DH78 AC012414.1-201ENST00000556676 535 ntBASIC20.14■□□□□ 0.81
RNF224P0DH78 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC20.14■□□□□ 0.81
RNF224P0DH78 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC20.14■□□□□ 0.81
RNF224P0DH78 AC080038.1-201ENST00000611274 1154 ntBASIC20.14■□□□□ 0.81
RNF224P0DH78 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC20.14■□□□□ 0.81
RNF224P0DH78 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
RNF224P0DH78 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
RNF224P0DH78 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
RNF224P0DH78 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
RNF224P0DH78 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 217.1 ms