Protein–RNA interactions for Protein: O94822

LTN1, E3 ubiquitin-protein ligase listerin, humanhuman

Predictions only

Length 1,766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1O94822 EI24-204ENST00000527235 1625 ntTSL 5 BASIC30.57■■■□□ 2.48
LTN1O94822 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC30.57■■■□□ 2.48
LTN1O94822 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
LTN1O94822 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
LTN1O94822 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
LTN1O94822 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
LTN1O94822 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC30.56■■■□□ 2.48
LTN1O94822 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC30.56■■■□□ 2.48
LTN1O94822 MIR3181-201ENST00000578512 73 ntBASIC30.56■■■□□ 2.48
LTN1O94822 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC30.56■■■□□ 2.48
LTN1O94822 AC233992.3-201ENST00000607491 485 ntBASIC30.56■■■□□ 2.48
LTN1O94822 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC30.56■■■□□ 2.48
LTN1O94822 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
LTN1O94822 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
LTN1O94822 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC30.55■■■□□ 2.48
LTN1O94822 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC30.55■■■□□ 2.48
LTN1O94822 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC30.55■■■□□ 2.48
LTN1O94822 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC30.55■■■□□ 2.48
LTN1O94822 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC30.55■■■□□ 2.48
LTN1O94822 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC30.55■■■□□ 2.48
LTN1O94822 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
LTN1O94822 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC30.54■■■□□ 2.48
LTN1O94822 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC30.54■■■□□ 2.48
LTN1O94822 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC30.54■■■□□ 2.48
LTN1O94822 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC30.54■■■□□ 2.48
LTN1O94822 AL031602.1-201ENST00000633169 911 ntBASIC30.54■■■□□ 2.48
LTN1O94822 HLA-L-211ENST00000482052 1765 ntBASIC30.54■■■□□ 2.48
LTN1O94822 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC30.53■■■□□ 2.48
LTN1O94822 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
LTN1O94822 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC30.53■■■□□ 2.48
LTN1O94822 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC30.53■■■□□ 2.48
LTN1O94822 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC30.52■■■□□ 2.48
LTN1O94822 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC30.52■■■□□ 2.48
LTN1O94822 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC30.52■■■□□ 2.48
LTN1O94822 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC30.52■■■□□ 2.48
LTN1O94822 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC30.52■■■□□ 2.48
LTN1O94822 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC30.52■■■□□ 2.48
LTN1O94822 GTSE1-AS1-202ENST00000623117 1518 ntBASIC30.51■■■□□ 2.48
LTN1O94822 AC027612.3-201ENST00000413684 1047 ntBASIC30.51■■■□□ 2.48
LTN1O94822 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC30.51■■■□□ 2.48
LTN1O94822 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC30.51■■■□□ 2.48
LTN1O94822 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC30.51■■■□□ 2.47
LTN1O94822 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC30.51■■■□□ 2.47
LTN1O94822 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC30.5■■■□□ 2.47
LTN1O94822 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC30.5■■■□□ 2.47
LTN1O94822 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC30.5■■■□□ 2.47
LTN1O94822 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
LTN1O94822 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
LTN1O94822 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC30.49■■■□□ 2.47
LTN1O94822 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC30.49■■■□□ 2.47
LTN1O94822 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC30.49■■■□□ 2.47
LTN1O94822 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC30.49■■■□□ 2.47
LTN1O94822 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC30.49■■■□□ 2.47
LTN1O94822 AL161729.1-201ENST00000604104 1402 ntBASIC30.49■■■□□ 2.47
LTN1O94822 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC30.49■■■□□ 2.47
LTN1O94822 AC034268.1-201ENST00000441047 882 ntBASIC30.49■■■□□ 2.47
LTN1O94822 SP2-202ENST00000613139 908 ntTSL 5 BASIC30.49■■■□□ 2.47
LTN1O94822 MPST-208ENST00000628507 698 ntTSL 5 BASIC30.49■■■□□ 2.47
LTN1O94822 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
LTN1O94822 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC30.48■■■□□ 2.47
LTN1O94822 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC30.48■■■□□ 2.47
LTN1O94822 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC30.48■■■□□ 2.47
LTN1O94822 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
LTN1O94822 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC30.48■■■□□ 2.47
LTN1O94822 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC30.47■■■□□ 2.47
LTN1O94822 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
LTN1O94822 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC30.46■■■□□ 2.47
LTN1O94822 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC30.46■■■□□ 2.47
LTN1O94822 ALDH1A3-203ENST00000557963 1670 ntBASIC30.46■■■□□ 2.47
LTN1O94822 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
LTN1O94822 KRT18P5-201ENST00000436075 1291 ntBASIC30.46■■■□□ 2.47
LTN1O94822 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC30.46■■■□□ 2.47
LTN1O94822 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC30.45■■■□□ 2.47
LTN1O94822 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC30.45■■■□□ 2.47
LTN1O94822 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC30.45■■■□□ 2.46
LTN1O94822 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC30.44■■■□□ 2.46
LTN1O94822 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC30.44■■■□□ 2.46
LTN1O94822 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC30.44■■■□□ 2.46
LTN1O94822 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC30.44■■■□□ 2.46
LTN1O94822 GRAMD4P2-201ENST00000423297 1097 ntBASIC30.44■■■□□ 2.46
LTN1O94822 AC012414.1-201ENST00000556676 535 ntBASIC30.44■■■□□ 2.46
LTN1O94822 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC30.44■■■□□ 2.46
LTN1O94822 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC30.44■■■□□ 2.46
LTN1O94822 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC30.43■■■□□ 2.46
LTN1O94822 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC30.43■■■□□ 2.46
LTN1O94822 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC30.43■■■□□ 2.46
LTN1O94822 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC30.43■■■□□ 2.46
LTN1O94822 IKBKGP1-201ENST00000612193 1073 ntBASIC30.43■■■□□ 2.46
LTN1O94822 TSPY26P-201ENST00000476365 1326 ntBASIC30.43■■■□□ 2.46
LTN1O94822 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC30.43■■■□□ 2.46
LTN1O94822 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC30.42■■■□□ 2.46
LTN1O94822 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC30.42■■■□□ 2.46
LTN1O94822 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
LTN1O94822 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC30.42■■■□□ 2.46
LTN1O94822 AC126544.1-201ENST00000580842 1059 ntBASIC30.42■■■□□ 2.46
LTN1O94822 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC30.42■■■□□ 2.46
LTN1O94822 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC30.42■■■□□ 2.46
LTN1O94822 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
LTN1O94822 ASB1-202ENST00000409297 878 ntTSL 5 BASIC30.41■■■□□ 2.46
LTN1O94822 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC30.41■■■□□ 2.46
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms