Protein–RNA interactions for Protein: O75888

TNFSF13, Tumor necrosis factor ligand superfamily member 13, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13O75888 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
TNFSF13O75888 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC20.06■□□□□ 0.8
TNFSF13O75888 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC20.06■□□□□ 0.8
TNFSF13O75888 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TNFSF13O75888 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TNFSF13O75888 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TNFSF13O75888 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC20.06■□□□□ 0.8
TNFSF13O75888 SERBP1P1-201ENST00000396021 1160 ntBASIC20.06■□□□□ 0.8
TNFSF13O75888 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
TNFSF13O75888 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC20.06■□□□□ 0.8
TNFSF13O75888 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
TNFSF13O75888 AC142381.2-201ENST00000566120 298 ntBASIC20.06■□□□□ 0.8
TNFSF13O75888 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TNFSF13O75888 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
TNFSF13O75888 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TNFSF13O75888 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TNFSF13O75888 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TNFSF13O75888 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TNFSF13O75888 AL355001.2-201ENST00000620617 1191 ntBASIC20.05■□□□□ 0.8
TNFSF13O75888 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
TNFSF13O75888 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TNFSF13O75888 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC20.05■□□□□ 0.8
TNFSF13O75888 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TNFSF13O75888 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TNFSF13O75888 EBPL-204ENST00000378272 766 ntTSL 3 BASIC20.04■□□□□ 0.8
TNFSF13O75888 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TNFSF13O75888 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC20.04■□□□□ 0.8
TNFSF13O75888 AC241377.3-202ENST00000626088 1088 ntBASIC20.04■□□□□ 0.8
TNFSF13O75888 AC241585.3-202ENST00000628937 1088 ntBASIC20.04■□□□□ 0.8
TNFSF13O75888 AC245100.8-202ENST00000629247 1058 ntBASIC20.04■□□□□ 0.8
TNFSF13O75888 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
TNFSF13O75888 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
TNFSF13O75888 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
TNFSF13O75888 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TNFSF13O75888 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
TNFSF13O75888 PTCHD3P2-201ENST00000424937 1205 ntBASIC20.03■□□□□ 0.8
TNFSF13O75888 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
TNFSF13O75888 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
TNFSF13O75888 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC20.03■□□□□ 0.8
TNFSF13O75888 EED-207ENST00000528180 1745 ntTSL 5 BASIC20.02■□□□□ 0.8
TNFSF13O75888 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
TNFSF13O75888 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC20.02■□□□□ 0.8
TNFSF13O75888 AL138724.1-201ENST00000606771 1088 ntBASIC20.02■□□□□ 0.8
TNFSF13O75888 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TNFSF13O75888 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TNFSF13O75888 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TNFSF13O75888 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
TNFSF13O75888 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC20.02■□□□□ 0.8
TNFSF13O75888 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC20.02■□□□□ 0.8
TNFSF13O75888 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.79
TNFSF13O75888 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
TNFSF13O75888 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
TNFSF13O75888 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
TNFSF13O75888 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TNFSF13O75888 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC20.01■□□□□ 0.79
TNFSF13O75888 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
TNFSF13O75888 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
TNFSF13O75888 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
TNFSF13O75888 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TNFSF13O75888 MIR4767-201ENST00000582827 78 ntBASIC20.01■□□□□ 0.79
TNFSF13O75888 NKILA-201ENST00000613231 537 ntTSL 4 BASIC20.01■□□□□ 0.79
TNFSF13O75888 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC20.01■□□□□ 0.79
TNFSF13O75888 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TNFSF13O75888 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TNFSF13O75888 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
TNFSF13O75888 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TNFSF13O75888 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC20■□□□□ 0.79
TNFSF13O75888 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TNFSF13O75888 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC20■□□□□ 0.79
TNFSF13O75888 PTMA-205ENST00000410064 814 ntTSL 2 BASIC20■□□□□ 0.79
TNFSF13O75888 AC006455.2-201ENST00000429931 906 ntBASIC20■□□□□ 0.79
TNFSF13O75888 GRAMD4P4-201ENST00000613563 1115 ntBASIC20■□□□□ 0.79
TNFSF13O75888 AC011298.3-201ENST00000615796 283 ntBASIC20■□□□□ 0.79
TNFSF13O75888 VGF-203ENST00000611537 1622 ntTSL 5 BASIC20■□□□□ 0.79
TNFSF13O75888 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
TNFSF13O75888 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
TNFSF13O75888 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
TNFSF13O75888 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
TNFSF13O75888 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC19.99■□□□□ 0.79
TNFSF13O75888 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
TNFSF13O75888 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC19.99■□□□□ 0.79
TNFSF13O75888 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC19.99■□□□□ 0.79
TNFSF13O75888 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC19.99■□□□□ 0.79
TNFSF13O75888 AL136967.2-201ENST00000623968 743 ntBASIC19.99■□□□□ 0.79
TNFSF13O75888 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TNFSF13O75888 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
TNFSF13O75888 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC19.98■□□□□ 0.79
TNFSF13O75888 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TNFSF13O75888 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
TNFSF13O75888 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TNFSF13O75888 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
TNFSF13O75888 MIR939-201ENST00000401314 82 ntBASIC19.98■□□□□ 0.79
TNFSF13O75888 ZNRF2P3-201ENST00000424200 374 ntBASIC19.98■□□□□ 0.79
TNFSF13O75888 AP001330.3-201ENST00000520123 633 ntBASIC19.98■□□□□ 0.79
TNFSF13O75888 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC19.98■□□□□ 0.79
TNFSF13O75888 AF213884.3-201ENST00000563833 479 ntBASIC19.98■□□□□ 0.79
TNFSF13O75888 AC009086.3-201ENST00000623486 1008 ntBASIC19.98■□□□□ 0.79
TNFSF13O75888 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
TNFSF13O75888 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TNFSF13O75888 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms