Protein–RNA interactions for Protein: O60635

TSPAN1, Tetraspanin-1, humanhuman

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN1O60635 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC24.8■■□□□ 1.56
TSPAN1O60635 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC24.8■■□□□ 1.56
TSPAN1O60635 AC024257.2-201ENST00000549699 147 ntBASIC24.8■■□□□ 1.56
TSPAN1O60635 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC24.8■■□□□ 1.56
TSPAN1O60635 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC24.8■■□□□ 1.56
TSPAN1O60635 AC135279.3-201ENST00000610945 1311 ntBASIC24.8■■□□□ 1.56
TSPAN1O60635 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
TSPAN1O60635 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
TSPAN1O60635 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
TSPAN1O60635 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
TSPAN1O60635 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC24.79■■□□□ 1.56
TSPAN1O60635 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC24.79■■□□□ 1.56
TSPAN1O60635 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC24.79■■□□□ 1.56
TSPAN1O60635 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC24.79■■□□□ 1.56
TSPAN1O60635 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC24.78■■□□□ 1.56
TSPAN1O60635 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC24.78■■□□□ 1.56
TSPAN1O60635 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
TSPAN1O60635 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC24.78■■□□□ 1.56
TSPAN1O60635 DUX4L19-201ENST00000557448 1267 ntBASIC24.78■■□□□ 1.56
TSPAN1O60635 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC24.78■■□□□ 1.56
TSPAN1O60635 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC24.78■■□□□ 1.56
TSPAN1O60635 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC24.78■■□□□ 1.56
TSPAN1O60635 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
TSPAN1O60635 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
TSPAN1O60635 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
TSPAN1O60635 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
TSPAN1O60635 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
TSPAN1O60635 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
TSPAN1O60635 AC092171.4-201ENST00000609130 632 ntBASIC24.77■■□□□ 1.56
TSPAN1O60635 NKILA-201ENST00000613231 537 ntTSL 4 BASIC24.77■■□□□ 1.56
TSPAN1O60635 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
TSPAN1O60635 EI24-213ENST00000618552 1747 ntTSL 5 BASIC24.77■■□□□ 1.56
TSPAN1O60635 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC24.77■■□□□ 1.56
TSPAN1O60635 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC24.77■■□□□ 1.56
TSPAN1O60635 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC24.76■■□□□ 1.55
TSPAN1O60635 SYT6-210ENST00000641643 1587 ntBASIC24.76■■□□□ 1.55
TSPAN1O60635 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
TSPAN1O60635 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
TSPAN1O60635 AL031432.3-201ENST00000607698 485 ntBASIC24.76■■□□□ 1.55
TSPAN1O60635 SF1-220ENST00000626028 704 ntTSL 2 BASIC24.76■■□□□ 1.55
TSPAN1O60635 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC24.76■■□□□ 1.55
TSPAN1O60635 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
TSPAN1O60635 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC24.75■■□□□ 1.55
TSPAN1O60635 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC24.75■■□□□ 1.55
TSPAN1O60635 AL139125.2-201ENST00000623134 1869 ntBASIC24.75■■□□□ 1.55
TSPAN1O60635 SERBP1P1-201ENST00000396021 1160 ntBASIC24.75■■□□□ 1.55
TSPAN1O60635 LINC01124-201ENST00000409786 2117 ntBASIC24.75■■□□□ 1.55
TSPAN1O60635 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
TSPAN1O60635 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC24.75■■□□□ 1.55
TSPAN1O60635 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC24.75■■□□□ 1.55
TSPAN1O60635 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC24.75■■□□□ 1.55
TSPAN1O60635 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC24.75■■□□□ 1.55
TSPAN1O60635 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
TSPAN1O60635 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
TSPAN1O60635 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC24.74■■□□□ 1.55
TSPAN1O60635 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC24.74■■□□□ 1.55
TSPAN1O60635 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC24.74■■□□□ 1.55
TSPAN1O60635 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC24.74■■□□□ 1.55
TSPAN1O60635 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC24.74■■□□□ 1.55
TSPAN1O60635 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
TSPAN1O60635 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC24.74■■□□□ 1.55
TSPAN1O60635 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC24.74■■□□□ 1.55
TSPAN1O60635 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
TSPAN1O60635 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
TSPAN1O60635 LINC00543-201ENST00000567234 1845 ntBASIC24.73■■□□□ 1.55
TSPAN1O60635 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
TSPAN1O60635 AC141586.4-201ENST00000624558 1573 ntBASIC24.73■■□□□ 1.55
TSPAN1O60635 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC24.73■■□□□ 1.55
TSPAN1O60635 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
TSPAN1O60635 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC24.73■■□□□ 1.55
TSPAN1O60635 AC006455.2-201ENST00000429931 906 ntBASIC24.73■■□□□ 1.55
TSPAN1O60635 AC241377.3-202ENST00000626088 1088 ntBASIC24.73■■□□□ 1.55
TSPAN1O60635 AC241585.3-202ENST00000628937 1088 ntBASIC24.73■■□□□ 1.55
TSPAN1O60635 AC245100.8-202ENST00000629247 1058 ntBASIC24.73■■□□□ 1.55
TSPAN1O60635 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
TSPAN1O60635 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
TSPAN1O60635 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC24.73■■□□□ 1.55
TSPAN1O60635 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC24.72■■□□□ 1.55
TSPAN1O60635 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
TSPAN1O60635 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
TSPAN1O60635 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC24.72■■□□□ 1.55
TSPAN1O60635 VGF-203ENST00000611537 1622 ntTSL 5 BASIC24.72■■□□□ 1.55
TSPAN1O60635 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
TSPAN1O60635 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
TSPAN1O60635 PTCHD3P2-201ENST00000424937 1205 ntBASIC24.72■■□□□ 1.55
TSPAN1O60635 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
TSPAN1O60635 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC24.72■■□□□ 1.55
TSPAN1O60635 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
TSPAN1O60635 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC24.71■■□□□ 1.55
TSPAN1O60635 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC24.71■■□□□ 1.55
TSPAN1O60635 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC24.71■■□□□ 1.55
TSPAN1O60635 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.55
TSPAN1O60635 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC24.7■■□□□ 1.54
TSPAN1O60635 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
TSPAN1O60635 EDA-201ENST00000338901 1233 ntBASIC24.7■■□□□ 1.54
TSPAN1O60635 SUDS3P1-201ENST00000505831 966 ntBASIC24.7■■□□□ 1.54
TSPAN1O60635 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
TSPAN1O60635 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC24.7■■□□□ 1.54
TSPAN1O60635 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC24.69■■□□□ 1.54
TSPAN1O60635 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC24.69■■□□□ 1.54
Retrieved 100 of 98,524 protein–RNA pairs in 89 ms