Protein–RNA interactions for Protein: O15541

RNF113A, RING finger protein 113A, humanhuman

Known RBP Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF113AO15541 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
RNF113AO15541 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC27.36■■□□□ 1.97
RNF113AO15541 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC27.35■■□□□ 1.97
RNF113AO15541 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC27.35■■□□□ 1.97
RNF113AO15541 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC27.35■■□□□ 1.97
RNF113AO15541 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
RNF113AO15541 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
RNF113AO15541 RPP21-222ENST00000433076 577 ntTSL 2 BASIC27.35■■□□□ 1.97
RNF113AO15541 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC27.35■■□□□ 1.97
RNF113AO15541 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
RNF113AO15541 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
RNF113AO15541 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
RNF113AO15541 QDPR-206ENST00000508623 601 ntTSL 3 BASIC27.34■■□□□ 1.97
RNF113AO15541 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC27.34■■□□□ 1.97
RNF113AO15541 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC27.34■■□□□ 1.97
RNF113AO15541 TRIR-202ENST00000588213 841 ntTSL 3 BASIC27.34■■□□□ 1.97
RNF113AO15541 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
RNF113AO15541 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
RNF113AO15541 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
RNF113AO15541 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
RNF113AO15541 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC27.33■■□□□ 1.97
RNF113AO15541 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.96
RNF113AO15541 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC27.33■■□□□ 1.96
RNF113AO15541 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.96
RNF113AO15541 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC27.32■■□□□ 1.96
RNF113AO15541 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
RNF113AO15541 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
RNF113AO15541 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC27.32■■□□□ 1.96
RNF113AO15541 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
RNF113AO15541 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
RNF113AO15541 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
RNF113AO15541 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
RNF113AO15541 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
RNF113AO15541 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
RNF113AO15541 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
RNF113AO15541 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC27.32■■□□□ 1.96
RNF113AO15541 AL512631.2-201ENST00000604634 923 ntBASIC27.32■■□□□ 1.96
RNF113AO15541 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
RNF113AO15541 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC27.32■■□□□ 1.96
RNF113AO15541 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC27.32■■□□□ 1.96
RNF113AO15541 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
RNF113AO15541 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC27.31■■□□□ 1.96
RNF113AO15541 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC27.31■■□□□ 1.96
RNF113AO15541 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
RNF113AO15541 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
RNF113AO15541 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC27.31■■□□□ 1.96
RNF113AO15541 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC27.31■■□□□ 1.96
RNF113AO15541 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
RNF113AO15541 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
RNF113AO15541 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC27.3■■□□□ 1.96
RNF113AO15541 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC27.3■■□□□ 1.96
RNF113AO15541 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
RNF113AO15541 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
RNF113AO15541 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC27.3■■□□□ 1.96
RNF113AO15541 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC27.3■■□□□ 1.96
RNF113AO15541 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
RNF113AO15541 AC009102.2-201ENST00000606772 1639 ntBASIC27.3■■□□□ 1.96
RNF113AO15541 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC27.3■■□□□ 1.96
RNF113AO15541 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC27.3■■□□□ 1.96
RNF113AO15541 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC27.3■■□□□ 1.96
RNF113AO15541 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
RNF113AO15541 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC27.29■■□□□ 1.96
RNF113AO15541 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
RNF113AO15541 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC27.29■■□□□ 1.96
RNF113AO15541 AC131281.2-201ENST00000520478 145 ntBASIC27.29■■□□□ 1.96
RNF113AO15541 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC27.29■■□□□ 1.96
RNF113AO15541 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC27.29■■□□□ 1.96
RNF113AO15541 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
RNF113AO15541 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
RNF113AO15541 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
RNF113AO15541 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
RNF113AO15541 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
RNF113AO15541 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC27.28■■□□□ 1.96
RNF113AO15541 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC27.28■■□□□ 1.96
RNF113AO15541 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
RNF113AO15541 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
RNF113AO15541 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
RNF113AO15541 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
RNF113AO15541 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC27.27■■□□□ 1.96
RNF113AO15541 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
RNF113AO15541 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC27.27■■□□□ 1.96
RNF113AO15541 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC27.27■■□□□ 1.96
RNF113AO15541 MIR4466-201ENST00000606121 54 ntBASIC27.27■■□□□ 1.96
RNF113AO15541 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC27.27■■□□□ 1.96
RNF113AO15541 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC27.27■■□□□ 1.96
RNF113AO15541 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC27.27■■□□□ 1.96
RNF113AO15541 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
RNF113AO15541 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC27.26■■□□□ 1.95
RNF113AO15541 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC27.26■■□□□ 1.95
RNF113AO15541 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC27.26■■□□□ 1.95
RNF113AO15541 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC27.26■■□□□ 1.95
RNF113AO15541 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
RNF113AO15541 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
RNF113AO15541 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
RNF113AO15541 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
RNF113AO15541 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
RNF113AO15541 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
RNF113AO15541 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
RNF113AO15541 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC27.24■■□□□ 1.95
RNF113AO15541 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
Retrieved 100 of 98,524 protein–RNA pairs in 70.1 ms