Protein–RNA interactions for Protein: A6NKU9

SPDYE3, Speedy protein E3, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPDYE3A6NKU9 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
SPDYE3A6NKU9 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC25.91■■□□□ 1.74
SPDYE3A6NKU9 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
SPDYE3A6NKU9 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC25.91■■□□□ 1.74
SPDYE3A6NKU9 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC25.91■■□□□ 1.74
SPDYE3A6NKU9 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC25.91■■□□□ 1.74
SPDYE3A6NKU9 AC009102.2-201ENST00000606772 1639 ntBASIC25.91■■□□□ 1.74
SPDYE3A6NKU9 EI24-213ENST00000618552 1747 ntTSL 5 BASIC25.91■■□□□ 1.74
SPDYE3A6NKU9 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
SPDYE3A6NKU9 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC25.9■■□□□ 1.74
SPDYE3A6NKU9 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
SPDYE3A6NKU9 MTURN-203ENST00000409688 843 ntTSL 2 BASIC25.9■■□□□ 1.74
SPDYE3A6NKU9 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC25.9■■□□□ 1.74
SPDYE3A6NKU9 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC25.9■■□□□ 1.74
SPDYE3A6NKU9 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
SPDYE3A6NKU9 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
SPDYE3A6NKU9 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
SPDYE3A6NKU9 AC004812.2-201ENST00000611079 2094 ntBASIC25.89■■□□□ 1.74
SPDYE3A6NKU9 PREB-202ENST00000406567 1910 ntTSL 5 BASIC25.89■■□□□ 1.74
SPDYE3A6NKU9 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC25.89■■□□□ 1.74
SPDYE3A6NKU9 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC25.89■■□□□ 1.74
SPDYE3A6NKU9 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC25.89■■□□□ 1.73
SPDYE3A6NKU9 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC25.89■■□□□ 1.73
SPDYE3A6NKU9 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC25.89■■□□□ 1.73
SPDYE3A6NKU9 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC25.88■■□□□ 1.73
SPDYE3A6NKU9 GATM-206ENST00000558336 1522 ntTSL 2 BASIC25.88■■□□□ 1.73
SPDYE3A6NKU9 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC25.88■■□□□ 1.73
SPDYE3A6NKU9 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
SPDYE3A6NKU9 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC25.87■■□□□ 1.73
SPDYE3A6NKU9 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC25.87■■□□□ 1.73
SPDYE3A6NKU9 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC25.87■■□□□ 1.73
SPDYE3A6NKU9 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC25.87■■□□□ 1.73
SPDYE3A6NKU9 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC25.87■■□□□ 1.73
SPDYE3A6NKU9 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC25.87■■□□□ 1.73
SPDYE3A6NKU9 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
SPDYE3A6NKU9 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
SPDYE3A6NKU9 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
SPDYE3A6NKU9 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC25.86■■□□□ 1.73
SPDYE3A6NKU9 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC25.86■■□□□ 1.73
SPDYE3A6NKU9 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
SPDYE3A6NKU9 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
SPDYE3A6NKU9 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC25.85■■□□□ 1.73
SPDYE3A6NKU9 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC25.85■■□□□ 1.73
SPDYE3A6NKU9 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC25.85■■□□□ 1.73
SPDYE3A6NKU9 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
SPDYE3A6NKU9 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC25.84■■□□□ 1.73
SPDYE3A6NKU9 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
SPDYE3A6NKU9 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC25.84■■□□□ 1.73
SPDYE3A6NKU9 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
SPDYE3A6NKU9 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
SPDYE3A6NKU9 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC25.84■■□□□ 1.73
SPDYE3A6NKU9 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC25.84■■□□□ 1.73
SPDYE3A6NKU9 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC25.84■■□□□ 1.73
SPDYE3A6NKU9 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
SPDYE3A6NKU9 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC25.84■■□□□ 1.73
SPDYE3A6NKU9 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
SPDYE3A6NKU9 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC25.84■■□□□ 1.73
SPDYE3A6NKU9 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
SPDYE3A6NKU9 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
SPDYE3A6NKU9 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC25.84■■□□□ 1.73
SPDYE3A6NKU9 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC25.83■■□□□ 1.73
SPDYE3A6NKU9 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC25.83■■□□□ 1.73
SPDYE3A6NKU9 C17orf82-201ENST00000623772 1530 ntBASIC25.83■■□□□ 1.72
SPDYE3A6NKU9 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC25.82■■□□□ 1.72
SPDYE3A6NKU9 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC25.82■■□□□ 1.72
SPDYE3A6NKU9 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
SPDYE3A6NKU9 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
SPDYE3A6NKU9 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
SPDYE3A6NKU9 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
SPDYE3A6NKU9 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
SPDYE3A6NKU9 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC25.82■■□□□ 1.72
SPDYE3A6NKU9 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC25.82■■□□□ 1.72
SPDYE3A6NKU9 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
SPDYE3A6NKU9 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC25.82■■□□□ 1.72
SPDYE3A6NKU9 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
SPDYE3A6NKU9 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC25.82■■□□□ 1.72
SPDYE3A6NKU9 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
SPDYE3A6NKU9 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC25.82■■□□□ 1.72
SPDYE3A6NKU9 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC25.81■■□□□ 1.72
SPDYE3A6NKU9 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC25.81■■□□□ 1.72
SPDYE3A6NKU9 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
SPDYE3A6NKU9 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC25.81■■□□□ 1.72
SPDYE3A6NKU9 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
SPDYE3A6NKU9 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC25.81■■□□□ 1.72
SPDYE3A6NKU9 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
SPDYE3A6NKU9 NALT1-201ENST00000429224 738 ntTSL 5 BASIC25.81■■□□□ 1.72
SPDYE3A6NKU9 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
SPDYE3A6NKU9 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
SPDYE3A6NKU9 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC25.81■■□□□ 1.72
SPDYE3A6NKU9 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
SPDYE3A6NKU9 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
SPDYE3A6NKU9 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC25.8■■□□□ 1.72
SPDYE3A6NKU9 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC25.8■■□□□ 1.72
SPDYE3A6NKU9 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC25.8■■□□□ 1.72
SPDYE3A6NKU9 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC25.8■■□□□ 1.72
SPDYE3A6NKU9 AC096631.2-201ENST00000436136 790 ntBASIC25.8■■□□□ 1.72
SPDYE3A6NKU9 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC25.8■■□□□ 1.72
SPDYE3A6NKU9 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
SPDYE3A6NKU9 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC25.8■■□□□ 1.72
SPDYE3A6NKU9 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC25.8■■□□□ 1.72
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms