Protein–RNA interactions for Protein: A0A0B4J241

TRAV13-1, T-cell receptor alpha variable 13-1 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV13-1A0A0B4J241 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
TRAV13-1A0A0B4J241 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRAV13-1A0A0B4J241 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
TRAV13-1A0A0B4J241 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
TRAV13-1A0A0B4J241 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
TRAV13-1A0A0B4J241 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRAV13-1A0A0B4J241 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRAV13-1A0A0B4J241 HES4-204ENST00000484667 667 ntTSL 3 BASIC15.73■□□□□ 0.11
TRAV13-1A0A0B4J241 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRAV13-1A0A0B4J241 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRAV13-1A0A0B4J241 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC15.73■□□□□ 0.11
TRAV13-1A0A0B4J241 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
TRAV13-1A0A0B4J241 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRAV13-1A0A0B4J241 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRAV13-1A0A0B4J241 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRAV13-1A0A0B4J241 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC15.73■□□□□ 0.11
TRAV13-1A0A0B4J241 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRAV13-1A0A0B4J241 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRAV13-1A0A0B4J241 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
TRAV13-1A0A0B4J241 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRAV13-1A0A0B4J241 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRAV13-1A0A0B4J241 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
TRAV13-1A0A0B4J241 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC15.72■□□□□ 0.11
TRAV13-1A0A0B4J241 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
TRAV13-1A0A0B4J241 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRAV13-1A0A0B4J241 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC15.72■□□□□ 0.11
TRAV13-1A0A0B4J241 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRAV13-1A0A0B4J241 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC15.72■□□□□ 0.11
TRAV13-1A0A0B4J241 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRAV13-1A0A0B4J241 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRAV13-1A0A0B4J241 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC15.71■□□□□ 0.11
TRAV13-1A0A0B4J241 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRAV13-1A0A0B4J241 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRAV13-1A0A0B4J241 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC15.71■□□□□ 0.11
TRAV13-1A0A0B4J241 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRAV13-1A0A0B4J241 AL117328.2-201ENST00000624617 1940 ntBASIC15.71■□□□□ 0.11
TRAV13-1A0A0B4J241 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC15.71■□□□□ 0.11
TRAV13-1A0A0B4J241 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
TRAV13-1A0A0B4J241 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRAV13-1A0A0B4J241 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
TRAV13-1A0A0B4J241 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
TRAV13-1A0A0B4J241 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.1
TRAV13-1A0A0B4J241 ANOS2P-203ENST00000472227 1816 ntBASIC15.71■□□□□ 0.1
TRAV13-1A0A0B4J241 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
TRAV13-1A0A0B4J241 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRAV13-1A0A0B4J241 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
TRAV13-1A0A0B4J241 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRAV13-1A0A0B4J241 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TRAV13-1A0A0B4J241 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRAV13-1A0A0B4J241 CLDN5-201ENST00000403084 2357 ntBASIC15.7■□□□□ 0.1
TRAV13-1A0A0B4J241 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRAV13-1A0A0B4J241 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC15.7■□□□□ 0.1
TRAV13-1A0A0B4J241 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC15.7■□□□□ 0.1
TRAV13-1A0A0B4J241 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRAV13-1A0A0B4J241 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TRAV13-1A0A0B4J241 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRAV13-1A0A0B4J241 AC233723.2-201ENST00000623798 2106 ntBASIC15.7■□□□□ 0.1
TRAV13-1A0A0B4J241 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC15.69■□□□□ 0.1
TRAV13-1A0A0B4J241 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRAV13-1A0A0B4J241 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
TRAV13-1A0A0B4J241 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRAV13-1A0A0B4J241 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
TRAV13-1A0A0B4J241 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC15.69■□□□□ 0.1
TRAV13-1A0A0B4J241 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TRAV13-1A0A0B4J241 GPX1-201ENST00000419349 1106 ntBASIC15.69■□□□□ 0.1
TRAV13-1A0A0B4J241 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRAV13-1A0A0B4J241 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TRAV13-1A0A0B4J241 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRAV13-1A0A0B4J241 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC15.69■□□□□ 0.1
TRAV13-1A0A0B4J241 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRAV13-1A0A0B4J241 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC15.69■□□□□ 0.1
TRAV13-1A0A0B4J241 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRAV13-1A0A0B4J241 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRAV13-1A0A0B4J241 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRAV13-1A0A0B4J241 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRAV13-1A0A0B4J241 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRAV13-1A0A0B4J241 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRAV13-1A0A0B4J241 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
TRAV13-1A0A0B4J241 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
TRAV13-1A0A0B4J241 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC15.68■□□□□ 0.1
TRAV13-1A0A0B4J241 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TRAV13-1A0A0B4J241 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRAV13-1A0A0B4J241 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
TRAV13-1A0A0B4J241 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC15.68■□□□□ 0.1
TRAV13-1A0A0B4J241 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRAV13-1A0A0B4J241 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRAV13-1A0A0B4J241 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRAV13-1A0A0B4J241 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRAV13-1A0A0B4J241 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TRAV13-1A0A0B4J241 AC133552.2-201ENST00000619106 1032 ntBASIC15.68■□□□□ 0.1
TRAV13-1A0A0B4J241 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC15.68■□□□□ 0.1
TRAV13-1A0A0B4J241 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRAV13-1A0A0B4J241 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRAV13-1A0A0B4J241 AC090877.2-201ENST00000558441 1738 ntBASIC15.68■□□□□ 0.1
TRAV13-1A0A0B4J241 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC15.68■□□□□ 0.1
TRAV13-1A0A0B4J241 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRAV13-1A0A0B4J241 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC15.68■□□□□ 0.1
TRAV13-1A0A0B4J241 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC15.67■□□□□ 0.1
TRAV13-1A0A0B4J241 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TRAV13-1A0A0B4J241 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 180 ms