Protein–RNA interactions for Protein: A0A0A0MS06

TRBV23-1, T-cell receptor beta variable 23-1 (non-functional) (Fragment), humanhuman

Predictions only

Length 115 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV23-1A0A0A0MS06 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
TRBV23-1A0A0A0MS06 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC19.01■□□□□ 0.63
TRBV23-1A0A0A0MS06 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC19.01■□□□□ 0.63
TRBV23-1A0A0A0MS06 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
TRBV23-1A0A0A0MS06 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
TRBV23-1A0A0A0MS06 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TRBV23-1A0A0A0MS06 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
TRBV23-1A0A0A0MS06 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TRBV23-1A0A0A0MS06 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC19■□□□□ 0.63
TRBV23-1A0A0A0MS06 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC19■□□□□ 0.63
TRBV23-1A0A0A0MS06 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
TRBV23-1A0A0A0MS06 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TRBV23-1A0A0A0MS06 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
TRBV23-1A0A0A0MS06 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
TRBV23-1A0A0A0MS06 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC19■□□□□ 0.63
TRBV23-1A0A0A0MS06 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
TRBV23-1A0A0A0MS06 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
TRBV23-1A0A0A0MS06 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC19■□□□□ 0.63
TRBV23-1A0A0A0MS06 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC19■□□□□ 0.63
TRBV23-1A0A0A0MS06 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
TRBV23-1A0A0A0MS06 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
TRBV23-1A0A0A0MS06 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
TRBV23-1A0A0A0MS06 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
TRBV23-1A0A0A0MS06 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TRBV23-1A0A0A0MS06 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC18.99■□□□□ 0.63
TRBV23-1A0A0A0MS06 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TRBV23-1A0A0A0MS06 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
TRBV23-1A0A0A0MS06 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC18.99■□□□□ 0.63
TRBV23-1A0A0A0MS06 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
TRBV23-1A0A0A0MS06 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TRBV23-1A0A0A0MS06 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
TRBV23-1A0A0A0MS06 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
TRBV23-1A0A0A0MS06 GUSBP5-201ENST00000418136 578 ntBASIC18.99■□□□□ 0.63
TRBV23-1A0A0A0MS06 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
TRBV23-1A0A0A0MS06 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TRBV23-1A0A0A0MS06 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC18.99■□□□□ 0.63
TRBV23-1A0A0A0MS06 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
TRBV23-1A0A0A0MS06 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TRBV23-1A0A0A0MS06 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TRBV23-1A0A0A0MS06 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TRBV23-1A0A0A0MS06 LINC01124-201ENST00000409786 2117 ntBASIC18.98■□□□□ 0.63
TRBV23-1A0A0A0MS06 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
TRBV23-1A0A0A0MS06 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
TRBV23-1A0A0A0MS06 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC18.98■□□□□ 0.63
TRBV23-1A0A0A0MS06 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC18.98■□□□□ 0.63
TRBV23-1A0A0A0MS06 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
TRBV23-1A0A0A0MS06 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TRBV23-1A0A0A0MS06 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TRBV23-1A0A0A0MS06 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC18.98■□□□□ 0.63
TRBV23-1A0A0A0MS06 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TRBV23-1A0A0A0MS06 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
TRBV23-1A0A0A0MS06 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC18.98■□□□□ 0.63
TRBV23-1A0A0A0MS06 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC18.98■□□□□ 0.63
TRBV23-1A0A0A0MS06 MTDHP2-201ENST00000601468 714 ntBASIC18.98■□□□□ 0.63
TRBV23-1A0A0A0MS06 MIR6722-201ENST00000617286 78 ntBASIC18.98■□□□□ 0.63
TRBV23-1A0A0A0MS06 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
TRBV23-1A0A0A0MS06 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC18.98■□□□□ 0.63
TRBV23-1A0A0A0MS06 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
TRBV23-1A0A0A0MS06 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
TRBV23-1A0A0A0MS06 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TRBV23-1A0A0A0MS06 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
TRBV23-1A0A0A0MS06 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC18.98■□□□□ 0.63
TRBV23-1A0A0A0MS06 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
TRBV23-1A0A0A0MS06 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
TRBV23-1A0A0A0MS06 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC18.97■□□□□ 0.63
TRBV23-1A0A0A0MS06 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC18.97■□□□□ 0.63
TRBV23-1A0A0A0MS06 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
TRBV23-1A0A0A0MS06 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
TRBV23-1A0A0A0MS06 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
TRBV23-1A0A0A0MS06 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TRBV23-1A0A0A0MS06 CREM-229ENST00000474362 1030 ntTSL 2 BASIC18.97■□□□□ 0.63
TRBV23-1A0A0A0MS06 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC18.97■□□□□ 0.63
TRBV23-1A0A0A0MS06 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC18.97■□□□□ 0.63
TRBV23-1A0A0A0MS06 CLTA-210ENST00000540080 989 ntTSL 2 BASIC18.97■□□□□ 0.63
TRBV23-1A0A0A0MS06 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
TRBV23-1A0A0A0MS06 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC18.97■□□□□ 0.63
TRBV23-1A0A0A0MS06 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC18.97■□□□□ 0.63
TRBV23-1A0A0A0MS06 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TRBV23-1A0A0A0MS06 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC18.97■□□□□ 0.63
TRBV23-1A0A0A0MS06 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TRBV23-1A0A0A0MS06 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TRBV23-1A0A0A0MS06 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
TRBV23-1A0A0A0MS06 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
TRBV23-1A0A0A0MS06 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TRBV23-1A0A0A0MS06 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC18.96■□□□□ 0.63
TRBV23-1A0A0A0MS06 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TRBV23-1A0A0A0MS06 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TRBV23-1A0A0A0MS06 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
TRBV23-1A0A0A0MS06 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
TRBV23-1A0A0A0MS06 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TRBV23-1A0A0A0MS06 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC18.96■□□□□ 0.63
TRBV23-1A0A0A0MS06 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC18.96■□□□□ 0.63
TRBV23-1A0A0A0MS06 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC18.96■□□□□ 0.63
TRBV23-1A0A0A0MS06 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TRBV23-1A0A0A0MS06 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC18.95■□□□□ 0.62
TRBV23-1A0A0A0MS06 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC18.95■□□□□ 0.62
TRBV23-1A0A0A0MS06 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC18.95■□□□□ 0.62
TRBV23-1A0A0A0MS06 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TRBV23-1A0A0A0MS06 TSPY9P-201ENST00000440215 945 ntBASIC18.95■□□□□ 0.62
TRBV23-1A0A0A0MS06 TSPY11P-201ENST00000442607 1045 ntBASIC18.95■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 63.2 ms