Protein–RNA interactions for Protein: Q9UN70

PCDHGC3, Protocadherin gamma-C3, humanhuman

Predictions only

Length 934 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3Q9UN70 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC24.15■■□□□ 1.46
PCDHGC3Q9UN70 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC24.15■■□□□ 1.46
PCDHGC3Q9UN70 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC24.15■■□□□ 1.46
PCDHGC3Q9UN70 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
PCDHGC3Q9UN70 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC24.15■■□□□ 1.46
PCDHGC3Q9UN70 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
PCDHGC3Q9UN70 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.46
PCDHGC3Q9UN70 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC24.14■■□□□ 1.46
PCDHGC3Q9UN70 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC24.14■■□□□ 1.46
PCDHGC3Q9UN70 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC24.14■■□□□ 1.45
PCDHGC3Q9UN70 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
PCDHGC3Q9UN70 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC24.14■■□□□ 1.45
PCDHGC3Q9UN70 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
PCDHGC3Q9UN70 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
PCDHGC3Q9UN70 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
PCDHGC3Q9UN70 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC24.13■■□□□ 1.45
PCDHGC3Q9UN70 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
PCDHGC3Q9UN70 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
PCDHGC3Q9UN70 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC24.13■■□□□ 1.45
PCDHGC3Q9UN70 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC24.13■■□□□ 1.45
PCDHGC3Q9UN70 AL035685.1-201ENST00000636663 812 ntBASIC24.13■■□□□ 1.45
PCDHGC3Q9UN70 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
PCDHGC3Q9UN70 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC24.13■■□□□ 1.45
PCDHGC3Q9UN70 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC24.12■■□□□ 1.45
PCDHGC3Q9UN70 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
PCDHGC3Q9UN70 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC24.12■■□□□ 1.45
PCDHGC3Q9UN70 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC24.12■■□□□ 1.45
PCDHGC3Q9UN70 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
PCDHGC3Q9UN70 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC24.12■■□□□ 1.45
PCDHGC3Q9UN70 REST-206ENST00000612429 1376 ntTSL 5 BASIC24.12■■□□□ 1.45
PCDHGC3Q9UN70 REST-207ENST00000616975 1370 ntTSL 5 BASIC24.12■■□□□ 1.45
PCDHGC3Q9UN70 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
PCDHGC3Q9UN70 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC24.12■■□□□ 1.45
PCDHGC3Q9UN70 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
PCDHGC3Q9UN70 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
PCDHGC3Q9UN70 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC24.12■■□□□ 1.45
PCDHGC3Q9UN70 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC24.11■■□□□ 1.45
PCDHGC3Q9UN70 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC24.11■■□□□ 1.45
PCDHGC3Q9UN70 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
PCDHGC3Q9UN70 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC24.11■■□□□ 1.45
PCDHGC3Q9UN70 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
PCDHGC3Q9UN70 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
PCDHGC3Q9UN70 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
PCDHGC3Q9UN70 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC24.1■■□□□ 1.45
PCDHGC3Q9UN70 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC24.1■■□□□ 1.45
PCDHGC3Q9UN70 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC24.1■■□□□ 1.45
PCDHGC3Q9UN70 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
PCDHGC3Q9UN70 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
PCDHGC3Q9UN70 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
PCDHGC3Q9UN70 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC24.09■■□□□ 1.45
PCDHGC3Q9UN70 CLTA-206ENST00000466396 695 ntTSL 2 BASIC24.09■■□□□ 1.45
PCDHGC3Q9UN70 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC24.09■■□□□ 1.45
PCDHGC3Q9UN70 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC24.09■■□□□ 1.45
PCDHGC3Q9UN70 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
PCDHGC3Q9UN70 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
PCDHGC3Q9UN70 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
PCDHGC3Q9UN70 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC24.08■■□□□ 1.45
PCDHGC3Q9UN70 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC24.08■■□□□ 1.45
PCDHGC3Q9UN70 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC24.08■■□□□ 1.45
PCDHGC3Q9UN70 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC24.08■■□□□ 1.45
PCDHGC3Q9UN70 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC24.08■■□□□ 1.45
PCDHGC3Q9UN70 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
PCDHGC3Q9UN70 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC24.08■■□□□ 1.45
PCDHGC3Q9UN70 OR2A1-AS1-204ENST00000470435 602 ntBASIC24.08■■□□□ 1.45
PCDHGC3Q9UN70 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
PCDHGC3Q9UN70 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC24.08■■□□□ 1.45
PCDHGC3Q9UN70 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.44
PCDHGC3Q9UN70 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.44
PCDHGC3Q9UN70 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC24.07■■□□□ 1.44
PCDHGC3Q9UN70 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC24.07■■□□□ 1.44
PCDHGC3Q9UN70 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
PCDHGC3Q9UN70 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC24.07■■□□□ 1.44
PCDHGC3Q9UN70 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC24.07■■□□□ 1.44
PCDHGC3Q9UN70 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC24.07■■□□□ 1.44
PCDHGC3Q9UN70 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC24.06■■□□□ 1.44
PCDHGC3Q9UN70 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
PCDHGC3Q9UN70 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC24.06■■□□□ 1.44
PCDHGC3Q9UN70 HES6-204ENST00000409182 863 ntTSL 2 BASIC24.06■■□□□ 1.44
PCDHGC3Q9UN70 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
PCDHGC3Q9UN70 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
PCDHGC3Q9UN70 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
PCDHGC3Q9UN70 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC24.05■■□□□ 1.44
PCDHGC3Q9UN70 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
PCDHGC3Q9UN70 CREM-229ENST00000474362 1030 ntTSL 2 BASIC24.05■■□□□ 1.44
PCDHGC3Q9UN70 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC24.05■■□□□ 1.44
PCDHGC3Q9UN70 USF2-207ENST00000595068 1612 ntTSL 5 BASIC24.05■■□□□ 1.44
PCDHGC3Q9UN70 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
PCDHGC3Q9UN70 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC24.05■■□□□ 1.44
PCDHGC3Q9UN70 RARA-203ENST00000394086 2008 ntTSL 2 BASIC24.05■■□□□ 1.44
PCDHGC3Q9UN70 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
PCDHGC3Q9UN70 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
PCDHGC3Q9UN70 MTDHP2-201ENST00000601468 714 ntBASIC24.04■■□□□ 1.44
PCDHGC3Q9UN70 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC24.04■■□□□ 1.44
PCDHGC3Q9UN70 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
PCDHGC3Q9UN70 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
PCDHGC3Q9UN70 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC24.03■■□□□ 1.44
PCDHGC3Q9UN70 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC24.03■■□□□ 1.44
PCDHGC3Q9UN70 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC24.03■■□□□ 1.44
PCDHGC3Q9UN70 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC24.03■■□□□ 1.44
PCDHGC3Q9UN70 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms