Protein–RNA interactions for Protein: Q9H1A7

POLR2J3, DNA-directed RNA polymerase II subunit RPB11-b2, humanhuman

Known RBP Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3Q9H1A7 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC20.99■□□□□ 0.95
POLR2J3Q9H1A7 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
POLR2J3Q9H1A7 STK32C-205ENST00000456004 607 ntTSL 2 BASIC20.99■□□□□ 0.95
POLR2J3Q9H1A7 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
POLR2J3Q9H1A7 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
POLR2J3Q9H1A7 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
POLR2J3Q9H1A7 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
POLR2J3Q9H1A7 EI24-213ENST00000618552 1747 ntTSL 5 BASIC20.98■□□□□ 0.95
POLR2J3Q9H1A7 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC20.98■□□□□ 0.95
POLR2J3Q9H1A7 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
POLR2J3Q9H1A7 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC20.98■□□□□ 0.95
POLR2J3Q9H1A7 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
POLR2J3Q9H1A7 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
POLR2J3Q9H1A7 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
POLR2J3Q9H1A7 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
POLR2J3Q9H1A7 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC20.97■□□□□ 0.95
POLR2J3Q9H1A7 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
POLR2J3Q9H1A7 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
POLR2J3Q9H1A7 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
POLR2J3Q9H1A7 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
POLR2J3Q9H1A7 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
POLR2J3Q9H1A7 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
POLR2J3Q9H1A7 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
POLR2J3Q9H1A7 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
POLR2J3Q9H1A7 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC20.97■□□□□ 0.95
POLR2J3Q9H1A7 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
POLR2J3Q9H1A7 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
POLR2J3Q9H1A7 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
POLR2J3Q9H1A7 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC20.96■□□□□ 0.95
POLR2J3Q9H1A7 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC20.96■□□□□ 0.95
POLR2J3Q9H1A7 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
POLR2J3Q9H1A7 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC20.96■□□□□ 0.95
POLR2J3Q9H1A7 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
POLR2J3Q9H1A7 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
POLR2J3Q9H1A7 ABHD17AP5-201ENST00000580133 923 ntBASIC20.96■□□□□ 0.95
POLR2J3Q9H1A7 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
POLR2J3Q9H1A7 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
POLR2J3Q9H1A7 GALC-202ENST00000393568 2054 ntTSL 2 BASIC20.95■□□□□ 0.94
POLR2J3Q9H1A7 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
POLR2J3Q9H1A7 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
POLR2J3Q9H1A7 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
POLR2J3Q9H1A7 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
POLR2J3Q9H1A7 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
POLR2J3Q9H1A7 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
POLR2J3Q9H1A7 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC20.95■□□□□ 0.94
POLR2J3Q9H1A7 AC139795.1-202ENST00000500444 432 ntBASIC20.95■□□□□ 0.94
POLR2J3Q9H1A7 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
POLR2J3Q9H1A7 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
POLR2J3Q9H1A7 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC20.95■□□□□ 0.94
POLR2J3Q9H1A7 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC20.94■□□□□ 0.94
POLR2J3Q9H1A7 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC20.94■□□□□ 0.94
POLR2J3Q9H1A7 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
POLR2J3Q9H1A7 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
POLR2J3Q9H1A7 ANOS2P-203ENST00000472227 1816 ntBASIC20.94■□□□□ 0.94
POLR2J3Q9H1A7 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
POLR2J3Q9H1A7 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
POLR2J3Q9H1A7 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
POLR2J3Q9H1A7 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
POLR2J3Q9H1A7 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
POLR2J3Q9H1A7 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC20.94■□□□□ 0.94
POLR2J3Q9H1A7 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC20.93■□□□□ 0.94
POLR2J3Q9H1A7 AC092068.2-201ENST00000590491 1708 ntBASIC20.93■□□□□ 0.94
POLR2J3Q9H1A7 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC20.93■□□□□ 0.94
POLR2J3Q9H1A7 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC20.93■□□□□ 0.94
POLR2J3Q9H1A7 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
POLR2J3Q9H1A7 NTF6A-201ENST00000591175 560 ntBASIC20.93■□□□□ 0.94
POLR2J3Q9H1A7 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC20.93■□□□□ 0.94
POLR2J3Q9H1A7 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
POLR2J3Q9H1A7 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
POLR2J3Q9H1A7 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
POLR2J3Q9H1A7 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC20.92■□□□□ 0.94
POLR2J3Q9H1A7 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
POLR2J3Q9H1A7 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
POLR2J3Q9H1A7 GAK-223ENST00000628912 497 ntTSL 5 BASIC20.92■□□□□ 0.94
POLR2J3Q9H1A7 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
POLR2J3Q9H1A7 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC20.92■□□□□ 0.94
POLR2J3Q9H1A7 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
POLR2J3Q9H1A7 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
POLR2J3Q9H1A7 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
POLR2J3Q9H1A7 AL117328.2-201ENST00000624617 1940 ntBASIC20.92■□□□□ 0.94
POLR2J3Q9H1A7 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
POLR2J3Q9H1A7 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
POLR2J3Q9H1A7 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
POLR2J3Q9H1A7 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
POLR2J3Q9H1A7 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
POLR2J3Q9H1A7 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
POLR2J3Q9H1A7 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
POLR2J3Q9H1A7 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC20.91■□□□□ 0.94
POLR2J3Q9H1A7 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC20.91■□□□□ 0.94
POLR2J3Q9H1A7 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC20.91■□□□□ 0.94
POLR2J3Q9H1A7 AC074183.2-201ENST00000623112 922 ntBASIC20.91■□□□□ 0.94
POLR2J3Q9H1A7 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
POLR2J3Q9H1A7 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
POLR2J3Q9H1A7 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
POLR2J3Q9H1A7 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
POLR2J3Q9H1A7 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
POLR2J3Q9H1A7 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
POLR2J3Q9H1A7 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
POLR2J3Q9H1A7 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
POLR2J3Q9H1A7 AC131274.2-201ENST00000580697 1507 ntBASIC20.9■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms