Protein–RNA interactions for Protein: Q9H158

PCDHAC1, Protocadherin alpha-C1, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHAC1Q9H158 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
PCDHAC1Q9H158 HES4-202ENST00000428771 1040 ntTSL 2 BASIC21.68■■□□□ 1.06
PCDHAC1Q9H158 RAP2CP1-202ENST00000605179 643 ntBASIC21.68■■□□□ 1.06
PCDHAC1Q9H158 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
PCDHAC1Q9H158 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
PCDHAC1Q9H158 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
PCDHAC1Q9H158 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
PCDHAC1Q9H158 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
PCDHAC1Q9H158 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
PCDHAC1Q9H158 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
PCDHAC1Q9H158 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
PCDHAC1Q9H158 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC21.67■■□□□ 1.06
PCDHAC1Q9H158 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
PCDHAC1Q9H158 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
PCDHAC1Q9H158 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC21.67■■□□□ 1.06
PCDHAC1Q9H158 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
PCDHAC1Q9H158 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC21.67■■□□□ 1.06
PCDHAC1Q9H158 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
PCDHAC1Q9H158 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
PCDHAC1Q9H158 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC21.66■■□□□ 1.06
PCDHAC1Q9H158 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC21.66■■□□□ 1.06
PCDHAC1Q9H158 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
PCDHAC1Q9H158 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC21.66■■□□□ 1.06
PCDHAC1Q9H158 USP48-205ENST00000421625 2818 ntTSL 2 BASIC21.66■■□□□ 1.06
PCDHAC1Q9H158 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC21.66■■□□□ 1.06
PCDHAC1Q9H158 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
PCDHAC1Q9H158 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
PCDHAC1Q9H158 EI24-213ENST00000618552 1747 ntTSL 5 BASIC21.66■■□□□ 1.06
PCDHAC1Q9H158 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
PCDHAC1Q9H158 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
PCDHAC1Q9H158 WWC2-AS2-201ENST00000578387 2183 ntBASIC21.65■■□□□ 1.06
PCDHAC1Q9H158 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
PCDHAC1Q9H158 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC21.65■■□□□ 1.06
PCDHAC1Q9H158 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
PCDHAC1Q9H158 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
PCDHAC1Q9H158 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
PCDHAC1Q9H158 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
PCDHAC1Q9H158 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
PCDHAC1Q9H158 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC21.65■■□□□ 1.06
PCDHAC1Q9H158 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
PCDHAC1Q9H158 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
PCDHAC1Q9H158 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
PCDHAC1Q9H158 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC21.64■■□□□ 1.06
PCDHAC1Q9H158 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
PCDHAC1Q9H158 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.06
PCDHAC1Q9H158 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC21.64■■□□□ 1.05
PCDHAC1Q9H158 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC21.64■■□□□ 1.05
PCDHAC1Q9H158 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC21.64■■□□□ 1.05
PCDHAC1Q9H158 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
PCDHAC1Q9H158 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
PCDHAC1Q9H158 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC21.64■■□□□ 1.05
PCDHAC1Q9H158 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
PCDHAC1Q9H158 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
PCDHAC1Q9H158 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
PCDHAC1Q9H158 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC21.63■■□□□ 1.05
PCDHAC1Q9H158 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
PCDHAC1Q9H158 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC21.63■■□□□ 1.05
PCDHAC1Q9H158 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
PCDHAC1Q9H158 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
PCDHAC1Q9H158 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
PCDHAC1Q9H158 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PCDHAC1Q9H158 AC007375.3-201ENST00000600936 2314 ntBASIC21.62■■□□□ 1.05
PCDHAC1Q9H158 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PCDHAC1Q9H158 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC21.62■■□□□ 1.05
PCDHAC1Q9H158 KRT18P10-201ENST00000388836 1287 ntBASIC21.62■■□□□ 1.05
PCDHAC1Q9H158 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC21.62■■□□□ 1.05
PCDHAC1Q9H158 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PCDHAC1Q9H158 ECEL1P1-201ENST00000373592 1742 ntBASIC21.62■■□□□ 1.05
PCDHAC1Q9H158 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC21.62■■□□□ 1.05
PCDHAC1Q9H158 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC21.62■■□□□ 1.05
PCDHAC1Q9H158 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
PCDHAC1Q9H158 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
PCDHAC1Q9H158 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PCDHAC1Q9H158 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
PCDHAC1Q9H158 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC21.61■■□□□ 1.05
PCDHAC1Q9H158 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
PCDHAC1Q9H158 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
PCDHAC1Q9H158 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
PCDHAC1Q9H158 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC21.61■■□□□ 1.05
PCDHAC1Q9H158 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC21.61■■□□□ 1.05
PCDHAC1Q9H158 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC21.61■■□□□ 1.05
PCDHAC1Q9H158 GPX1-201ENST00000419349 1106 ntBASIC21.61■■□□□ 1.05
PCDHAC1Q9H158 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC21.61■■□□□ 1.05
PCDHAC1Q9H158 AC026202.3-201ENST00000600805 1127 ntBASIC21.61■■□□□ 1.05
PCDHAC1Q9H158 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
PCDHAC1Q9H158 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
PCDHAC1Q9H158 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
PCDHAC1Q9H158 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC21.61■■□□□ 1.05
PCDHAC1Q9H158 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC21.61■■□□□ 1.05
PCDHAC1Q9H158 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
PCDHAC1Q9H158 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC21.6■■□□□ 1.05
PCDHAC1Q9H158 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
PCDHAC1Q9H158 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
PCDHAC1Q9H158 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
PCDHAC1Q9H158 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
PCDHAC1Q9H158 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
PCDHAC1Q9H158 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
PCDHAC1Q9H158 H19-210ENST00000439725 1929 ntTSL 2 BASIC21.6■■□□□ 1.05
PCDHAC1Q9H158 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
PCDHAC1Q9H158 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 82.4 ms