Protein–RNA interactions for Protein: Q9BY42

RTFDC1, Protein RTF2 homolog, humanhuman

Predicted RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1Q9BY42 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC28.04■■■□□ 2.08
RTFDC1Q9BY42 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
RTFDC1Q9BY42 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
RTFDC1Q9BY42 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
RTFDC1Q9BY42 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC28.03■■■□□ 2.08
RTFDC1Q9BY42 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
RTFDC1Q9BY42 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC28.03■■■□□ 2.08
RTFDC1Q9BY42 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC28.03■■■□□ 2.08
RTFDC1Q9BY42 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
RTFDC1Q9BY42 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC28.02■■■□□ 2.08
RTFDC1Q9BY42 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC28.02■■■□□ 2.08
RTFDC1Q9BY42 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC28.02■■■□□ 2.08
RTFDC1Q9BY42 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC28.02■■■□□ 2.08
RTFDC1Q9BY42 AC091060.1-201ENST00000623524 1766 ntBASIC28.01■■■□□ 2.08
RTFDC1Q9BY42 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC28.01■■■□□ 2.07
RTFDC1Q9BY42 AK1-201ENST00000223836 736 ntTSL 3 BASIC28.01■■■□□ 2.07
RTFDC1Q9BY42 SNX3-202ENST00000349379 890 ntTSL 2 BASIC28.01■■■□□ 2.07
RTFDC1Q9BY42 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC28.01■■■□□ 2.07
RTFDC1Q9BY42 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC28.01■■■□□ 2.07
RTFDC1Q9BY42 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC28.01■■■□□ 2.07
RTFDC1Q9BY42 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC28■■■□□ 2.07
RTFDC1Q9BY42 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC28■■■□□ 2.07
RTFDC1Q9BY42 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC28■■■□□ 2.07
RTFDC1Q9BY42 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC28■■■□□ 2.07
RTFDC1Q9BY42 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC27.99■■■□□ 2.07
RTFDC1Q9BY42 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC27.99■■■□□ 2.07
RTFDC1Q9BY42 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC27.99■■■□□ 2.07
RTFDC1Q9BY42 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC27.99■■■□□ 2.07
RTFDC1Q9BY42 VGF-203ENST00000611537 1622 ntTSL 5 BASIC27.99■■■□□ 2.07
RTFDC1Q9BY42 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC27.99■■■□□ 2.07
RTFDC1Q9BY42 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC27.99■■■□□ 2.07
RTFDC1Q9BY42 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC27.98■■■□□ 2.07
RTFDC1Q9BY42 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC27.98■■■□□ 2.07
RTFDC1Q9BY42 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC27.98■■■□□ 2.07
RTFDC1Q9BY42 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC27.98■■■□□ 2.07
RTFDC1Q9BY42 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC27.98■■■□□ 2.07
RTFDC1Q9BY42 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC27.98■■■□□ 2.07
RTFDC1Q9BY42 AC009086.3-201ENST00000623486 1008 ntBASIC27.98■■■□□ 2.07
RTFDC1Q9BY42 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC27.98■■■□□ 2.07
RTFDC1Q9BY42 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC27.98■■■□□ 2.07
RTFDC1Q9BY42 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC27.97■■■□□ 2.07
RTFDC1Q9BY42 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC27.97■■■□□ 2.07
RTFDC1Q9BY42 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC27.97■■■□□ 2.07
RTFDC1Q9BY42 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC27.97■■■□□ 2.07
RTFDC1Q9BY42 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC27.97■■■□□ 2.07
RTFDC1Q9BY42 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC27.97■■■□□ 2.07
RTFDC1Q9BY42 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC27.97■■■□□ 2.07
RTFDC1Q9BY42 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC27.97■■■□□ 2.07
RTFDC1Q9BY42 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC27.97■■■□□ 2.07
RTFDC1Q9BY42 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC27.96■■■□□ 2.07
RTFDC1Q9BY42 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC27.96■■■□□ 2.07
RTFDC1Q9BY42 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC27.95■■■□□ 2.07
RTFDC1Q9BY42 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC27.95■■■□□ 2.07
RTFDC1Q9BY42 GRAMD4P2-201ENST00000423297 1097 ntBASIC27.95■■■□□ 2.06
RTFDC1Q9BY42 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC27.95■■■□□ 2.06
RTFDC1Q9BY42 AC034268.1-201ENST00000441047 882 ntBASIC27.95■■■□□ 2.06
RTFDC1Q9BY42 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC27.94■■■□□ 2.06
RTFDC1Q9BY42 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC27.94■■■□□ 2.06
RTFDC1Q9BY42 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC27.94■■■□□ 2.06
RTFDC1Q9BY42 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC27.94■■■□□ 2.06
RTFDC1Q9BY42 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC27.94■■■□□ 2.06
RTFDC1Q9BY42 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC27.94■■■□□ 2.06
RTFDC1Q9BY42 AC145676.1-201ENST00000514988 2004 ntBASIC27.93■■■□□ 2.06
RTFDC1Q9BY42 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC27.93■■■□□ 2.06
RTFDC1Q9BY42 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC27.93■■■□□ 2.06
RTFDC1Q9BY42 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC27.93■■■□□ 2.06
RTFDC1Q9BY42 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC27.93■■■□□ 2.06
RTFDC1Q9BY42 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC27.93■■■□□ 2.06
RTFDC1Q9BY42 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC27.93■■■□□ 2.06
RTFDC1Q9BY42 RARRES2P11-201ENST00000635158 484 ntBASIC27.93■■■□□ 2.06
RTFDC1Q9BY42 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC27.93■■■□□ 2.06
RTFDC1Q9BY42 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC27.93■■■□□ 2.06
RTFDC1Q9BY42 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC27.92■■■□□ 2.06
RTFDC1Q9BY42 LSR-205ENST00000427250 1606 ntTSL 2 BASIC27.92■■■□□ 2.06
RTFDC1Q9BY42 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC27.92■■■□□ 2.06
RTFDC1Q9BY42 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC27.92■■■□□ 2.06
RTFDC1Q9BY42 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC27.92■■■□□ 2.06
RTFDC1Q9BY42 ASB1-202ENST00000409297 878 ntTSL 5 BASIC27.92■■■□□ 2.06
RTFDC1Q9BY42 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC27.92■■■□□ 2.06
RTFDC1Q9BY42 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC27.92■■■□□ 2.06
RTFDC1Q9BY42 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC27.92■■■□□ 2.06
RTFDC1Q9BY42 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC27.92■■■□□ 2.06
RTFDC1Q9BY42 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC27.91■■■□□ 2.06
RTFDC1Q9BY42 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC27.91■■■□□ 2.06
RTFDC1Q9BY42 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC27.91■■■□□ 2.06
RTFDC1Q9BY42 HACD1-201ENST00000326961 773 ntTSL 2 BASIC27.91■■■□□ 2.06
RTFDC1Q9BY42 YBX1P1-201ENST00000445822 960 ntBASIC27.91■■■□□ 2.06
RTFDC1Q9BY42 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC27.91■■■□□ 2.06
RTFDC1Q9BY42 NKILA-201ENST00000613231 537 ntTSL 4 BASIC27.91■■■□□ 2.06
RTFDC1Q9BY42 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC27.91■■■□□ 2.06
RTFDC1Q9BY42 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC27.91■■■□□ 2.06
RTFDC1Q9BY42 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC27.91■■■□□ 2.06
RTFDC1Q9BY42 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC27.91■■■□□ 2.06
RTFDC1Q9BY42 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC27.91■■■□□ 2.06
RTFDC1Q9BY42 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC27.9■■■□□ 2.06
RTFDC1Q9BY42 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC27.9■■■□□ 2.06
RTFDC1Q9BY42 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC27.9■■■□□ 2.06
RTFDC1Q9BY42 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC27.9■■■□□ 2.06
RTFDC1Q9BY42 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC27.9■■■□□ 2.06
RTFDC1Q9BY42 AC022517.1-201ENST00000592429 346 ntBASIC27.9■■■□□ 2.06
Retrieved 100 of 98,524 protein–RNA pairs in 78.8 ms